KEGG   Labeo rohita (rohu): 127168386
Entry
127168386         CDS       T09007                                 
Symbol
per1b
Name
(RefSeq) LOW QUALITY PROTEIN: period circadian protein homolog 1b
  KO
K21944  period circadian protein 1
Organism
lroh  Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lroh03400]
    127168386 (per1b)
DNA repair and recombination proteins [BR:lroh03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    127168386 (per1b)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 127168386
NCBI-ProteinID: XP_050971189
LinkDB
Position
7:17007340..17029884
AA seq 1404 aa
MSDDNSDIAPSNDTNRGAGGVEKKAGLVNRSCGMGESSXPSNSENSGTGSSPRGVSVPKG
STGDNRGTNSDDTDGLSSGNDSGERESEGGNGSRGRQSNRSYQSSSSQNGKDSGMCLETT
ESNKSSNSHSPSPPSSSLAYSLLSASSEQDPPSTSGCSSNQSARIQTQKELMRALNELKI
RLPPERKMKGRSSTLNALKYALSCVRQVRANQEYYHQWNVEECHGCSLDLSTFTVEELDN
ITSEYTLKNTDTFSMAVSFLSGKVVYISPQGSSLLRSKPEKLHGVLFSELLAPQDVSTFY
SNTAPCKLPPWASCIGSASPPADCTQEKSMFCRISGDVSTSGDVRYYPFRLTPYLLTLQD
SDAAYPQPCCLLIAERVHSGYEAPRIPPDKRVFTTSHTPSCLFQEVDERAVPLLGYLPQD
LVGTPVLLCIHPDDRPIMVAIHKKILQFAGQPFDHAPLRMCAHNGEYLTIDTSWSSFINP
WSRKVAFIVGRHKVRTSPLNEDVFTLPRGLEERTLTPDIAQLSEQIHRLLVQPVHSGSSQ
GYGSLASNGSHEHQPSAASSSESSGPGLEDPSQLHKPMTFQQICKDVHMVKTSGQQVFIE
SRNRPPLKKHSTAGALQAGETAEPGSSLGPCAAPPSKSSAPSMIVRKEPPTTFSYQQINC
LDSIVRYLESCNIPNTVKRKCGSSSCTASSTSDDDKQQDASGNSKGPSVSLVEESALLPP
LAMHSKAESVASVTSQCSFSSTIVHVGDKKPPESDIVMEEVPPTPNAAPPTTQPQAPLTA
MPSLPPSPAPDRDAGRRGGPGAAGGGERLGLTKEVLSAHTQQEEQNFLCRFRDLSKLRVF
DPTSAVRRRTTAPLARGVRCSRDYPAAGSSGRRRGRGGKRLKHQETSEQTGSCSPAGPPR
GIPALDRPSISSIPMGPAASSSSWPTSGSQTSVPSVPYPPGVLPLYPVYPHLSHPVSDPN
MQTGLRFPIQNSQMAPPMVHPMMAFVLPNYMFPQPNMGMPQPFYSPNSAFPFPAANIASL
APCQVPTPVPRAHSRSSTPHSYSQREAGAEREGAESPLFQSRCSSPLNLLQLEESPSNRF
EVTSGQQTTSPMVGQGGGAGGQASSNQRGSAVDSKENENGETTNESNQDAMSTSSDLLDL
LLQEDSRSGTGSAASGSGSSGTGSSGSGSGSSGSGSNGCSSSGSGTRSSQSSNTSKYFGS
VDSSENSHSRKQTAGGDGEAQFIKCVLQDPIWLLMANTDEKTMMTYQLPIRDRDSVLKED
RAALRAMQKQQPRFTEEQKSELSEVHPWIRTGRLPRAINISACVGCRSSPTVPSTAPFDV
EIHEMEFCSVLEVTEEGATAEKHTQADTAMEKSEAEGEGELCKDQEVETIMTSQINDQEM
MTEEQEASSQIEEEMGASHTQMTH
NT seq 4215 nt   +upstreamnt  +downstreamnt
atgagtgatgacaactcagacattgcccccagcaatgacacaaatagaggagcaggaggg
gtcgagaaaaaggcagggcttgtaaacagatcctgcggcatgggtgagagttctncccca
tcaaattcggaaaatagcgggacaggatcatctccacgaggggtatctgttcccaaagga
tccacaggtgacaaccgagggacgaattccgatgatacggatggactatcgagtggaaat
gactctggggagagggaaagtgaaggagggaatggatccagaggcagacagtcgaacaga
agttatcagagttcctccagtcagaatggaaaagactcaggcatgtgtctggagactaca
gaaagcaacaagagctcaaactctcacagcccctctccacccagcagctctctggcttac
agcctgttgagtgccagctctgaacaagacccaccatccaccagcggctgcagcagtaat
cagtctgctcgcatccagacccagaaagagctgatgagagccctaaatgagctgaagatc
cgtctgccaccagagagaaagatgaagggacgctccagcactcttaatgccctcaaatac
gccctcagctgtgtcagacaagtcagagccaatcaggagtattatcaccagtggaatgtt
gaggagtgtcatggctgtagtctggatctctccaccttcactgttgaagaactggataat
atcacctccgaatacacgctcaaaaatacagacactttctcaatggcagtttcgttcctg
tcagggaaggttgtgtacatctccccacagggttcatcacttctgcgcagtaagccagaa
aagctgcatggggttttgttttctgagcttttggccccccaagatgtgagcaccttctac
agcaacactgcaccctgcaaactacctccctgggcctcctgcatcggctctgcctctcca
ccagcagactgcacccaagagaagtccatgttttgtcgcatcagtggcgatgtctcaacc
agtggcgatgtgaggtactacccgttcagactgaccccctacctgctcacactccaagac
tctgatgcggcttaccctcaaccctgctgtttgctcatcgcagagagagtgcactcggga
tatgaggcccctcgcattcctccagataagagggtattcaccaccagtcacacccccagc
tgtctctttcaggaggtggatgagcgggcagttcctctgttaggttacctgcctcaggac
ctggtgggaaccccagtcctgctatgcatccatccggacgacagacccattatggtggcc
atccataagaagattcttcagtttgcagggcagccatttgaccacgctcctttgaggatg
tgcgcacataatggagagtatctgaccatagacacctcgtggtcctccttcattaacccc
tggagcaggaaggtggccttcattgttggccgccacaaagtcagaacctctccactgaat
gaggacgtctttaccctgccgagaggtctggaggagcggaccctgaccccagacatcgct
cagctcagtgagcagatccacaggctcctggtgcagcccgtccacagtggcagctctcag
ggctacggtagccttgccagcaatggatcccacgagcaccagccgagtgccgcctcctcg
tcagaaagcagcgggccgggtctggaggacccttcgcagctccacaaacctatgaccttc
cagcaaatctgcaaagatgttcacatggtgaagaccagcggacaacaggtcttcattgaa
tcccgcaaccgacctcctcttaaaaaacattctactgcaggtgctttgcaagcaggtgaa
acagcagagccaggcagcagtctcggcccctgtgctgctccaccctcgaagagctccgca
ccctccatgattgtgcggaaggagccgcccaccaccttctcttatcagcaaatcaactgc
ttggacagcatcgtaaggtatctggagagctgtaacatcccaaatacggtgaagaggaag
tgtggctcttcctcctgcactgcctcctccacctctgatgatgacaaacagcaggacgct
tcaggcaattctaaaggtccgtccgtgtctctggtagaggagagtgcgttgttaccccca
ctggccatgcacagtaaagctgaaagtgtagcctcggtcacctctcagtgcagtttcagc
agcaccatcgtccatgtgggggacaagaaacctcctgagtcagatatcgtaatggaggaa
gtccctccaactccgaatgctgctcctcctaccacacagccacaagctcctctcacagcc
atgccctctctgccccctagccctgctcctgatagggatgcagggagaagaggaggtcca
ggggcagctggaggaggagaaaggttgggtctcacgaaagaggtcctgtcagctcacaca
caacaagaggagcaaaacttcttgtgtcgcttcagagacttaagcaaactcagagtgttt
gacccaacctcagctgtgcgcagacgaacaaccgcacctttagcaagaggtgtgcgctgc
tctcgtgattacccagcagcaggtagtagcgggcgcaggcgtggtcgaggaggcaaaaga
ctgaagcaccaagaaacttcagagcaaacgggttcttgtagcccagctggcccaccaaga
gggattcccgctttggacaggccctctatttcctctatacctatgggtcctgcagccagc
tcctcctcctggcccacctcagggtcacaaactagcgttccctctgtcccgtacccaccc
ggcgtccttcctttatatcccgtctatccccatctttcccatcccgtctcagatcctaac
atgcagacggggctacgcttccccattcagaactcgcagatggcacctccaatggtccac
ccgatgatggcgtttgtattacccaactatatgtttccacagcccaacatgggcatgcct
cagcccttctacagcccaaactcagctttccctttccccgctgccaacatagcctccctt
gcgccatgtcaggtcccgaccccagtaccacgcgcccactctcgctccagcacccctcat
tcctacagccaaagagaggcaggggctgagagagaaggagcagagtctccgctctttcaa
tccagatgctcctcacccttaaatctgctgcagctggaggagtcaccaagtaaccggttc
gaggtgacgtcagggcaacagaccacatctcctatggtgggacaagggggtggagcagga
ggacaggcctcttccaatcagagaggttcagcggtggattcaaaagagaatgaaaatggt
gaaacaacaaatgaatccaatcaagatgccatgtccacctccagtgatctgctagacctg
ctgttacaggaggactctcgctcaggcactggttcagccgcctcaggctctgggtcatca
ggcacaggctcctctgggtcaggctcagggtcttctgggtcagggtccaatggctgcagc
tcttcaggaagtggaactagaagcagtcaaagcagcaatacaagcaagtacttcggcagt
gtggactcatcagagaacagccattcacgcaagcagacagcagggggtgatggagaggca
cagttcatcaaatgtgtcctacaagaccccatctggctcctgatggccaacacagatgaa
aagactatgatgacgtaccagctgcccatccgagacagagattctgtgttgaaagaggac
cgtgctgctctgagagccatgcagaaacagcagcctcgcttcactgaggagcagaaaagc
gaactgagtgaggttcacccttggatccgcactggacgcctgcctcgtgctatcaacatt
tctgcatgtgtgggctgtagatcctctcctacggtcccctccacggcccccttcgatgtg
gagatccacgagatggagttctgcagtgttctagaggtgacagaagagggcgccactgct
gaaaaacacactcaagcagacacagccatggagaagagcgaggctgagggagaaggcgag
ttgtgcaaagaccaggaggttgagactattatgacttcacaaatcaatgaccaagaaatg
atgacagaagaacaggaagcctcctcacagatagaggaggaaatgggtgcctcacataca
cagatgacacactaa

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