Labeo rohita (rohu): 127168391
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Entry
127168391 CDS
T09007
Symbol
rfx7a
Name
(RefSeq) DNA-binding protein RFX7
KO
K09175
DNA-binding protein RFX7
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127168391 (rfx7a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Other basic domains
RF-X
127168391 (rfx7a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
WHD_Cdc6
Motif
Other DBs
NCBI-GeneID:
127168391
NCBI-ProteinID:
XP_050971194
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All DBs
Position
7:complement(28706975..28739583)
Genome browser
AA seq
1497 aa
AA seq
DB search
MADEQQQPGPGVGPLPSAVQGLQGAEANALQLKIKNSICKTVQSKVDCILQDVEKLTDIE
KLYLYLKLPSGPSSGTEKNEQSSMSSSRTQQLHAFSWIRNHLEEHPETSLPKQEVYDEYK
SYCDSLGYHALSAADFGKIMKNVFPNMKARRLGMRGKSKYCYSGLRKKAFVHMPSLPNLD
LHKSGDGCEVFEATGQLSSAEDEVRMAACGLVCEWAQKVLSRQFDSVEDLARFLLNSHYI
GTKSVAALTVMTGSPSGAKMSIQSSAFAPTIDAHSFQPQVKTLVSPSIDAKQQLQRKIQK
KQQEQKLHSPLPGEAQARRADGGMTPGAGTGIPCGSPALLSPQPIGIVVAAVSSPITVQR
SRQLMSPSPVPMTAADSKVLPVNFQVVTQSVQPVKQSPKTPLNISASPISDRSARHRYAQ
ILPKPSASSGITLRSPTLLITNSPIKTVMSTPHVSSVNVVKMTTISLGCNGSGTGTPADT
PASNKVRPASAGVGSLNDDPQPVTRVRSGSIAAMPSLARSARSTTTTPVVDTKTNTEAII
GSGQEQGGMSRLATTPDAIGGVQRSGMLKPRAASVPTPLDKDSLGLDILTGTKCNERALL
SVKTLAAGSNNASNTNESTLYQNTNSTQSNSGNAVVASPKDAVLASKSPHKRPGLCTDLS
PTPVKKAHIAVLPASGSEGLKLNIMAKQIPRSSTPIRPESAPLAAVAKATAGPVRNTGFQ
TVRRPQSISQGRWEGASSITDYRIPITSTASQDTSVGNTMFQTVCRPRSISQGRWEGSST
SIESRAVVTRTVSAPGQALLQQVTKNPQDLLIGQSNSSAVCELKSVFWDGELQDGTQHQD
VYGPQMVSEPKQMMEPLPAIAQASPSNQQVQMSDYGTQANLGYFPFNDDDMTQDSIVEEL
VQMEEQMKINNSMQNFSNCVDNSLQGQQQSIQTTMMSTLQSNTLYYSSAHSSTPIQTPTP
TPTPTSEMIGSGQGLMHESPCSRLAPTTPVDSALGSSRQTPIGTPHSNCSSSVPPSPVEC
RNPFAFTPINSSITGYHDGSTVSSSPVKPMQRPMATHPDKTKLEWMNSGYNNSGGNSNNG
ISILPSYQDLVDDHFRKPHAFAIPAQTCQSQTRHHDTHISRLTPISPVQQQVASMASLNK
KEGFAVPAPLDNKTSISSSGSGTFRCRSVSPAVRQRNLSGTQAPNVPHSVVSPFNSPVTP
EVLNIFSNSDPDASVSSMAQRSQSVPVTVMMQSEVLPMQAGQPINTKNITNVLINKMDGD
GDDAVRGLGINNMPSNYTARMNLTQILETTAVPSFPGSASHQALISPCSSAFESQKPGYL
MKNAREEPMSFSVDESQAQSASGEHQPPQQQQQQHLGRRQLLGQEQQSQAMLLQNLQQHQ
HQQPLDLDRTVKDLLREESLNAGSHLVGQGSELSSGSAEFPSDMRLTSELTGSINDLNTL
DTNLLFDPGQQQGQYEDSTLEELKNDPLFQQICSETVNSAGFDWLESKDQATVEMLG
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgagcagcagcagcctggcccaggagtaggacctttaccttccgcggttcaa
ggattgcaaggggctgaggcgaacgcgttgcagctaaaaataaagaactcaatctgcaaa
actgtacaatcaaaggtggattgcattttgcaagatgtggagaagcttacagacattgaa
aaactctacctctatctcaaactgccttctggacccagcagtggcactgagaaaaatgag
cagagctccatgtcatcaagtcgtacccagcagttgcacgcatttagctggattcgtaac
cacctagaggagcatcccgaaacatcgctgcctaaacaagaagtctatgacgagtacaag
agttactgtgatagcctggggtatcacgctctcagcgctgcggactttggaaagatcatg
aagaacgtctttcccaatatgaaggcacgtcgacttggcatgcgaggcaaatccaagtat
tgctatagtggacttaggaagaaggcatttgtacacatgccatctcttcccaacctagat
cttcacaaatcaggtgatgggtgtgaagtgtttgaagctactggtcaactgtccagtgca
gaagatgaggtgcgcatggccgcatgtgggttggtgtgcgagtgggcgcagaaagtgttg
agtcggcaatttgacagcgttgaggatctggctcgatttcttttgaacagccactatatt
ggaactaagtctgtggctgctcttactgtgatgaccggttccccctcaggagcgaagatg
tccattcagtcatctgcatttgctcctacaatcgatgcacactcattccaacctcaggtt
aaaaccctggtctcaccctccatagatgccaaacagcagctacaaaggaagatccagaag
aagcagcaagaacagaaactgcattctccacttcctggtgaagctcaggccaggagggca
gatgggggcatgacacctggggcagggacgggcataccctgtggaagtcctgctcttctc
tcgccacaacctatcgggattgtggttgcagctgtttccagccctattacggttcagaga
agcaggcaattgatgtctcctagtcctgttcccatgacagctgcagacagcaaagttctt
cctgtaaactttcaagtggttacccagtcagtgcagcctgtgaagcagagccccaagaca
cctcttaacatctcggctagtccgataagcgaccggtcagctcgtcaccggtatgcccaa
atcctgcccaaaccatctgcctcgagtggcataaccctgcgctcaccaaccctgcttatc
acaaacagccccatcaagacggtaatgtcaactccgcacgtcagttcggtcaatgtagtc
aagatgacgacaatatctctgggctgtaacggcagtgggaccggcacaccagccgatacc
cctgccagcaacaaagtcagacctgcatctgctggagttggtagcctcaacgacgatcca
cagccagtaacacgtgttcgaagtgggtctatagctgcaatgccatcattggcaaggtca
gcgcgctcaacaaccacaacgcctgtagttgacactaaaacaaatactgaagccataatt
ggaagtggtcaagagcagggtggtatgagtagactggcaaccactccggacgccattggt
ggtgtacaacggtcaggaatgctcaaacccagagcggccagcgtacccactcctcttgac
aaggactctctgggattggacattctaacagggaccaaatgcaatgagagggcactcctt
agtgtcaaaactctggctgctggcagcaataatgcgtccaacactaatgaaagcactttg
taccagaatacaaatagcactcagtcaaacagtggtaatgcagttgtggcatcacccaaa
gatgcagtgttggcatccaagagccctcacaaaagacctggcttatgcactgatttgagt
ccaacacctgttaaaaaagcccacattgctgtgctaccagccagtggatccgaaggacta
aagttgaatataatggcgaagcaaattccgagatcaagtactccaataaggccagaaagt
gcacctctcgcagccgtagccaaagctaccgcaggtccggtcaggaacactggcttccag
acagttcgcaggccacaaagcatctcccaaggaagatgggaaggagcttcatcaataacg
gattatagaattcccatcacctctacagcaagtcaggatacttcagtagggaataccatg
tttcagactgtttgcaggcctcgcagcatctcccaggggagatgggaaggatcttcaacg
agtattgaaagtagagccgtggtcacccgtactgttagtgctccaggtcaagctttgcta
caacaagtaactaaaaacccacaggatttgcttataggccagtccaactcttctgcagta
tgtgaactgaagagtgtattttgggatggtgagctccaagatggcactcagcatcaagat
gtttatggcccgcaaatggtgtctgagccaaagcaaatgatggagccccttcctgcaatt
gctcaagcctcgccttccaaccagcaggttcaaatgagtgactacggaacccaggccaac
cttggctactttccctttaatgacgatgacatgacccaagatagcattgttgaggaactt
gtgcaaatggaagagcagatgaaaattaacaacagcatgcaaaatttcagcaactgtgtg
gataattcactgcaaggccagcaacaaagcatacagactaccatgatgtctacccttcag
agcaacaccttgtactacagctctgcgcatagcagcaccccaatacaaacacccactcca
acacctactcccacttcagagatgataggaagtggccagggtttgatgcacgaaagcccc
tgttcgcgcttagcccctaccactccggtcgacagcgctcttggaagtagtcgtcagact
cctattggcacgccacactccaattgcagcagtagtgtcccaccaagccctgtggaatgc
aggaacccttttgccttcactcctattaactctagcatcactggataccacgatggaagt
accgtctcttcaagccccgtcaagcccatgcaaagaccaatggctacacatccagataag
actaaactggaatggatgaacagtgggtacaataacagtggtgggaactccaacaatgga
attagcattctgccaagctaccaagacctagtagatgaccactttcgaaagcctcacgcc
ttcgccatcccagcccagacctgtcagtcacaaaccaggcatcacgacactcatatcagc
cgcttgacacccatttcgcccgtccagcagcaagttgcaagcatggctagcctcaacaag
aaagagggctttgctgtcccagcaccccttgacaacaagaccagcatttcgtcctcaggg
tctggaacgtttcgatgccgcagcgttagcccggcggtcaggcagcgcaacttgagcggg
acccaagcacccaatgttccccactctgtggtctctcctttcaactcaccagtaacacct
gaagtgctaaacatcttctctaacagtgaccctgacgcaagcgtcagcagcatggcgcag
aggagtcagtcagttccggtcactgtgatgatgcagtcggaggttctacccatgcaagca
ggccagccgattaataccaaaaacatcaccaatgtcctcatcaacaaaatggatggcgat
ggagacgacgctgtacgtggcctcggaatcaacaacatgccgtccaactacactgcccgc
atgaatctcacccagattctggagaccaccgcagtgcccagcttccctggtagtgccagc
caccaagctctgatctcgccttgttcgtcagcctttgagtcccagaagcctggttacctc
atgaagaacgccagggaggagccaatgagcttttctgtagacgaaagccaagcacaatca
gcctcaggggagcaccagccgccacaacaacagcagcagcagcacttaggtagacggcag
ctcctcgggcaggaacagcagagccaggccatgctgttgcaaaacctccagcaacatcag
caccagcaacccttggatttagaccgaactgtcaaagatcttttacgagaggaaagcttg
aatgctggctcgcatcttgtgggtcaaggatcagagcttagctctgggagtgcagagttt
cccagtgatatgcggctaacttctgagctcactggtagcataaatgacttaaatacattg
gacaccaaccttctttttgaccctggtcaacagcaaggacagtatgaagactccacactg
gaagaactgaagaacgacccactttttcaacagatatgcagcgagactgtgaattctgct
ggctttgactggttggagagcaaagaccaggcaacagtggaaatgttgggttaa
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integrated database retrieval system