Labeo rohita (rohu): 127168412
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Entry
127168412 CDS
T09007
Symbol
ube3c
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127168412 (ube3c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127168412 (ube3c)
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127168412 (ube3c)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
HECT type E3
127168412 (ube3c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
127168412
NCBI-ProteinID:
XP_050971225
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All DBs
Position
7:24465340..24498352
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AA seq
1080 aa
AA seq
DB search
MFSFEGDFRRTPKVSLGGASRKEEKASLLHRTQEERRKREDERKRLKNAIIIQSYIRGYQ
DRKQQYAIQRGYFDHCVCQCQSGSGPQLTDSAILSQLVRQLLFFYRLSEDRQRMIWMCQS
LVKHHAQFVKLLTGPERQSCLFQIKRILGHCCRLLQACEDDSLNVAVPMRMLEVFSSERT
YLPFLQDENYVTALIEQILHYMVEKGYYRSLYVLVNHKLPSSLEYSDSPSIPLAQTLLEH
TLKPLHFTYSSCPPDTRQFVFSAFTEEFISAPFTEQIYHFFVPALSDPKLAFPFQNFLWS
LQATIASSAQARAQAPWLFYFVLSVGESGLGSLSEEGLLLYLNALQTLLPLLPVTECTSR
ADINSDSEDEEEMTVQHPAAQDGSWISVHYITGECVQKLDTKQQTNALLTLVWRDSASED
IFTMMASICHTLMVQHRMMVPRVRLLYSLAFNARFLRHLWHLITSMKTKMITGSMVPLLQ
VMSRGSPMSLEDSNRIIPLFYLFSSLFSHSLISVHDSEFFGSADGQSQSSMMPFSLAELV
TLSRCLRDACLGIIKLAYPETKTEHKEEYVAAFRSVGVKTNSQVQQRIQAQQKRWVQLFK
VITNLVKMLKARDIRRPFCPSGHWLSDEVNIRADKVTQLYVPSARHVWRTRRMGRIGPLQ
STLDVGLEPPPLSVSEERHLAILTELPFVVPFEERVKIFQKLIYADKREVQGEGPFLDGV
NITIRRNYIYEDAYDKLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLNELLKS
GFNPNQGFFKTTNEGLLYPSPTAEMLVGESFTRHYYFLGRILGKALYENMLVELPFASFF
LSKLLGTSADVDIHHLASLDPEMYRNLLFLKSYEGDVEDLGLNFTVVNNDLGEAQVVELK
PGGKDIPVTTANRIAYIHLVADYRLNKQIRAHCLAFRQGLANVVNLEWLRMFDQQEIQVL
ISGAHVPICLEDLKRFTNYSGGYSANHPVIKIFWDVVESFSDEEKRKLLKFVTSCSRPPL
LGFKELYPAFCIHNGGADLERLPTASTCMNLLKLPEFCEPQQMRNKLLYAIESSAGFELS
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgttcagttttgagggagatttcaggagaacacccaaggtgtcccttgggggtgctagc
agaaaagaggaaaaagcatcacttcttcatcgaacacaagaagaaagaaggaaaagggag
gatgaaaggaaaagactaaaaaatgcaatcatcattcagtcttacataaggggataccaa
gacaggaaacagcaatatgctattcagaggggctactttgaccactgtgtgtgtcagtgc
cagtcaggctctggccctcaacttacagacagtgccatactcagccaacttgttcgccag
cttctctttttttacagactaagtgaagacagacagagaatgatctggatgtgtcagagt
ttggtaaagcatcatgctcagtttgtcaagctgctgacggggccagaaagacagagctgc
ctgtttcaaatcaagaggatactggggcactgttgcaggttattgcaagcatgtgaagat
gacagtctgaatgtggccgtcccgatgcggatgctggaggtgttttcgtctgagagaacc
tacttgccctttctacaggatgaaaactatgtcactgcacttattgagcaaatattgcac
tatatggtagagaaaggatactacagatctctgtatgttttagtaaatcacaagttgccg
tcgagtctagagtacagtgattccccatccattccactggcacaaacgctgctggaacac
acactcaagcctctgcactttacatacagctcctgccccccagataccaggcagtttgtt
ttttcggcctttactgaggagttcatctcagcgcctttcactgaacaaatctatcatttc
ttcgtgccagctttgtcagacccaaaactagctttcccatttcagaacttcctttggtca
cttcaggccaccatagcctcctctgcccaggccagagctcaggctccctggcttttttac
tttgtgctatccgttggagaatcaggcctgggctcactctccgaggaagggttgctgttg
tacttgaatgcgctacagactctgttgccgttgttgccagtgacggagtgcaccagtaga
gctgacatcaacagtgattcagaagatgaggaagaaatgaccgtacagcatcctgctgcg
caggatggcagttggatatctgtgcattatataacaggggaatgcgtacagaagttggac
actaagcagcagactaatgctctgctaacgttagtgtggagagactcggcaagtgaagac
atcttcaccatgatggcctccatctgtcacacgctgatggtgcaacatcgtatgatggtg
cccagagtcaggcttctgtacagtttagccttcaatgctcgctttcttagacacctatgg
catttaattacatctatgaagactaaaatgatcacaggctctatggttcccttgttgcaa
gtgatgtctcgaggatctccaatgtctctggaggactccaacaggatcatccctctcttc
tatctcttcagttcactcttcagtcattcactcatctcggtgcatgacagcgagttcttt
ggctcagcagatggtcagagccagtcctcgatgatgcccttctctctggcagagttggtg
acattgtctcggtgtttacgggacgcttgtctgggaatcattaagctggcctatcctgaa
actaagacggagcacaaagaggagtatgtagctgcgtttcgcagtgtcggagtgaaaaca
aacagccaagtacagcagcgcattcaagctcagcagaaacgatgggtccagctctttaag
gttattaccaaccttgtgaaaatgctgaaagctcgagatattcgaaggccgttctgtcca
tcgggtcactggctgtctgatgaggtcaacatcagagcagacaaggtgactcagctctac
gtgccctctgcaagacacgtgtggagaaccaggagaatgggacgtatcggaccgcttcag
tccacattagatgttggactggagcctccaccattgtcagtatcagaggagagacatttg
gcgatcctcaccgaacttccgtttgttgtgccctttgaggagagagtaaagatcttccag
aagttgatctacgctgataagcgtgaagtgcaaggagagggtccatttttggatggcgtt
aatatcaccattcgacggaactacatatatgaagatgcttacgacaagttatctccagag
aatgagcctgatcttaagaagaggatcagggttcatttactcaatgcacacgggctagat
gaagccggcattgacggaggaggaatattcagagagttcttgaatgagctgttgaagtcg
ggttttaatcctaaccaaggcttcttcaagacaactaatgaaggtcttctctatccgagt
cccactgcagagatgcttgtaggagaatcctttacccggcattattacttccttggcagg
atactgggaaaggcgctgtatgaaaacatgctagtggagctgccttttgcaagtttcttc
ctgtccaagctcttaggcaccagtgcagatgtggacatccaccatctggcctctctagac
ccagagatgtaccgaaacctgcttttcctcaagagctatgaaggcgatgttgaagacctc
ggccttaacttcactgtggtcaacaatgatcttggggaggcccaggtggtcgagctcaaa
ccagggggaaaggacatcccggtaaccacagccaacaggatagcctacatccatttagtg
gccgattaccgtctgaacaaacagatccgagcacactgcctggcctttcgacagggcctg
gccaacgtggtcaacctggagtggctgcgcatgtttgatcagcaggaaattcaggtactg
atttctggtgcacatgtgcccatctgtctggaagacctgaagagatttactaactactca
ggtggttattcagcaaatcatccagtgatcaaaattttctgggatgtggtggagagcttc
agcgatgaggagaaacgcaagctgctcaagtttgttacaagctgctcacgacctccgctc
ttaggctttaaggagctgtacccagccttttgcatccataacggaggcgctgacctggag
cgtctccctacggctagcacttgcatgaaccttctcaagctgccagagttctgtgaacct
cagcaaatgaggaacaagttactctatgctattgaatcctccgccggctttgagctcagc
tga
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