Labeo rohita (rohu): 127168426
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Entry
127168426 CDS
T09007
Symbol
adamtsl3
Name
(RefSeq) ADAMTS-like protein 3
KO
K24429
ADAMTS-like protein 1/3
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
127168426 (adamtsl3)
Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
127168426 (adamtsl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
I-set
TSP_1
Ig_3
Ig_2
ig
V-set
PLAC
TSP1_CCN
ADAMTS_CR_3
TSP1_spondin
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
127168426
NCBI-ProteinID:
XP_050971241
LinkDB
All DBs
Position
7:43405001..43644481
Genome browser
AA seq
1763 aa
AA seq
DB search
MELWVLPVCRISLMLTVMSSTGQGVASQMQSAYFLPEFALSPQGSFLEDTTGEQYLTYRY
DDQSSRTTRSDEERDTGWDAWGTWSDCSRTCGGGASYSLRRCLNGGNCEGRNIRYRTCSN
TDCPPESGDFRAQQCSAHNDIKYQGQTYEWIPVTYDPISPCALRCQARGKSLVVELAPKV
LDGTRCKADSLDMCISGICQEVGCDRQLGSNAKEDNCGVCAGDGSTCRLVRGQALPHVSP
EEPMKTVIEVPMGSRGLRFTAKGPDIIVIEANAPNSRREEVVFSSSGSHALGNNTVEYQR
GAERQTLRCYGPLSADFTIKVKYAGPKDTVMQFSFYQPIRYQWRETDFFPCSVTCGGGYQ
LNSADCMDIRYNKPVAEHLCHSFPENTKPTPKLKECNMDPCLESDGFKEVMPYDQYQPLP
RWEQNPWTSCSVSCGGGSQERSVVCLEEDIHGQVVQVEEWKCTHSPRPVSKQSCNNFECP
QWMAMEWSQCTVTCGPGLRYRVVLCVDHLGQHTGGCNPHLKPQIKEDCLVPVACHKPRES
QPVEAKLPWLKQAQELEETKVALEDPTFVPGPWSACSVSCGLGVQRRQVKCKVLLSFTQA
EVELPDEECDEDKPALQRTCDSDPCLASPDSSWKPVRTLEIPDQRGYVWEYMGFTPCSAS
CAVGKQMAVVRCMSTLKKEIVDDTLCNGSKALLSLLRICNPQPCPPRWEVSVWNPCSVSC
GVGLQTRSVSCVRSVAGNRTESVSSKECVERRPTELQACNQVACPPAWEAEEWQQCSHSC
GRGTQWRKVYCKQRLATGSYRRLNDEECAGTKPDVHRICINPDCLLPRLEGGEWSKCSVT
CGKGIQRREPVCRRQTASGQLVTLDRSACSDLPPPPLIRSCRMSPCSKHKHSKNRCPQVM
GLKRIYIQTRQEKRLSFTIGGRAYLLPKTSVVIKCPVRHFPKAQIRWEKDGSELTSSKRL
SITRSGALRIYNLEAEDIGLYRCWANQDSDIFILKLIGYNNRLLEHPEGKSLGSRNFHPY
VNKEGGYVGSKCHEGFPPGKKPLKSHPSWMQKNEFYRDDDGQPKELWDTLALGNYALASA
ARSHTGAFVLDPAQFEELVKNISLLAESGDVTDEMALHLIGKLMEDLAAAGQDSSTEEST
TMDNHLDRTPNTSELFEGNAPKKGSRALIVRQKHHGSAMSFQRDLRIHVGRTAYLTNATH
SLTLMCPVQGLPPPNLSWSKDGAPLQNSDRVSWDSDGEVHILSPGASDVGTYRCTATNDL
GSDSETTLVLLAESPTIAASRTNTSDVKSGSLKVVVGGVVSVHLDANLTLECPVKGVPRP
TVSWHRKEGPLAASASPLPDGSLLLRNLTPQDYGTYSCVAANSVGKSVASSLLRVAGGAV
GESEHQASKEMNRKRVLMASVIGTSITVKPGDTLRIGCPVVPSHRKPIKWSYQNQTLKQS
PGVSHRMLVGGRVLEMNTHGGKFDGRYECQTQTNNQQRLTAWIHVLSQEFEWRLGEWSTC
SASCGNRGTQMKKVQCLTSEGQEMPRSVCHHLSKPISQPRPCNLLDCPPSWVSTVWSRCS
SSCGRGFRERRVSCQQVEASGSVRVLSSTACEGSPRPEDREECSSHACVEWLTGPWGKCT
GRCLGPAVATQSRTVSCKHFSNSTSKTCDPKERPSPVRNCSSEMCDVHWKVFPWRTCTAA
CGSGFQSRRVECIHRQNKKTLPDLHCAWQRRPSTWQHCNITSCGSECKDRTHYCPVVKRL
KLCPVDLYRQRCCQTCSQDTSTT
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atggagctctgggttctgccagtatgtcggatcagcttgatgttgacagtgatgtcgtcc
actggtcagggagtagcgagccagatgcagagtgcttacttcctccctgaatttgcactt
tctccacaaggaagctttctggaagacacaacaggagagcagtatctcacctatcgctac
gatgaccagtcctcaagaacaacccgttcagatgaggagagggacaccggttgggatgcc
tggggcacgtggagtgactgttctcgtacctgtggaggcggagcctcatattctctgcgc
aggtgtctcaatggcgggaactgtgagggcagaaacatccgctacagaacatgcagcaac
acagactgtcctccagagtcaggtgacttcagggctcaacagtgctctgcccacaacgac
atcaaataccagggacaaacctatgagtggatacctgtgacgtacgatcctatttcaccc
tgcgccctccgatgtcaagcccgggggaaaagcctggtggtggaactggcgcccaaagtg
ttggatggcactcggtgcaaagcggattctctggatatgtgcatcagcgggatttgtcag
gaagttggctgtgacagacaactgggaagcaacgctaaggaggacaactgtggcgtgtgc
gctggagacggttccacttgccgactggtccgaggccaggctctgccccacgtgtcacct
gaagaacccatgaaaacggtgatcgaggtgccgatgggtagcagaggcctcagattcaca
gccaagggaccggacataattgtgattgaagcgaatgcaccaaacagcaggagagaagag
gtggtgttcagctcctcaggttctcacgctctgggtaacaacacggtggagtaccagaga
ggagcagaaagacagaccctccgctgctatgggccactgtctgcagacttcacaataaag
gtgaagtacgccggccctaaagacacagtgatgcagttctcgttttaccagcccattcgc
taccagtggagggaaactgactttttcccctgctctgtcacctgtggagggggttaccag
ctcaattcggctgattgcatggacattcgttacaacaaaccggttgcggagcatctgtgc
cacagcttcccagagaacaccaaacccacacccaaactcaaggagtgcaacatggacccc
tgcctcgaaagtgatggcttcaaggaagtgatgccctacgaccagtaccagcctctacct
cgctgggagcagaacccgtggacgtcgtgttcggtgtcgtgtggaggaggctctcaggag
agaagtgtggtgtgtttggaggaggacattcacgggcaggtcgtgcaggtcgaggaatgg
aagtgcacacactcccctcgaccagtcagcaaacagagctgcaacaactttgagtgtccg
cagtggatggccatggaatggtctcagtgcacggtcacctgcggcccaggtttgcggtac
agagtggtgctgtgtgtggatcaccttggacaacatactggaggctgcaatcctcacctc
aaaccccaaatcaaagaggactgcctggtgcccgtcgcctgccacaaaccacgagagagc
caacctgttgaagccaagctgccctggttgaaacaggctcaagagttggaagaaaccaaa
gtagccttggaagacccaacgttcgtcccaggtccgtggtcagcctgcagtgtgtcttgt
ggtctgggcgttcaaaggcgtcaagtgaaatgtaaagtgctgctgtcttttactcaagcc
gaagtcgaactacctgatgaagagtgtgacgaggacaagcctgccttacaaaggacctgc
gattcagacccctgtttagcgtctccagactcttcctggaagcccgtgagaacccttgag
atccctgatcagcgtggctatgtttgggaatacatgggcttcactccctgctctgcttcg
tgcgctgttggcaaacagatggctgttgtcaggtgtatgagcaccttgaaaaaggaaatt
gttgatgacacactctgcaacggatccaaagcgctgctctccttgcttcgcatctgtaac
cctcagccatgtcctccgagatgggaggtgagcgtgtggaacccatgttctgtgtcgtgt
ggtgtggggctgcagacgcgcagtgtgtcctgcgtgaggtctgtggcaggaaaccgcact
gaatctgtgtccagtaaagaatgtgtggaaagaagacctacagaactgcaggcctgcaac
caggtggcatgtccaccggcctgggaggctgaggagtggcagcagtgctctcattcgtgt
ggcagaggtactcagtggcgcaaggtttactgtaaacagagactggctactggaagctac
cgcaggctaaacgacgaggagtgcgctggtaccaaacccgacgtccacaggatctgcatc
aaccctgactgtctgctgcctcgcctggaaggaggagagtggtcaaagtgttctgtgacg
tgtggtaaaggcattcagcggcgggaacccgtgtgtaggagacagacggcctccggtcag
ctggtcactttggacaggtcggcctgcagtgaccttccccctcctcccctgatcagaagc
tgccgaatgagcccatgcagcaagcacaagcactccaaaaaccgttgccctcaggtcatg
ggcctgaaacgcatctacatccagacgagacaagaaaaacgcctcagttttaccatcgga
ggacgagcctaccttcttcccaagacctccgtcgttatcaagtgtccggttcggcatttt
cctaaagctcagatccgttgggagaaggatgggagcgagctgaccagctccaaacgtctg
agcatcaccagatctggcgctttgaggatctacaaccttgaggctgaagatatcggacta
taccgatgctgggccaaccaagattcagacatcttcatcctgaagctgatcggatacaat
aacagacttttggagcatcccgaaggaaagagtttgggaagtagaaacttccatccgtac
gtcaataaagaaggaggctacgtcggttcaaagtgccacgaggggtttccacctggaaag
aagcctcttaaatctcacccaagctggatgcaaaagaacgagttctaccgggacgacgac
ggccagcctaaggagctctgggatacgcttgctttagggaactatgctttggcttcagcc
gccaggagccacacaggagcttttgtccttgatcctgcccagttcgaggagctcgtgaag
aacatcagtctgctggctgagagcggagatgtgacggatgaaatggcgttgcacctgatt
gggaaacttatggaggatctggctgccgcggggcaagactcatcgactgaggaaagcact
acgatggataatcatttagataggacgccgaacacttctgaacttttcgagggaaatgca
ccaaagaaaggcagccgagcgttaatcgttcgtcaaaagcatcacggatctgccatgagc
ttccagagggatctcaggatccatgtgggcagaaccgcttacctaaccaatgctacccat
agtctcacgctgatgtgtcccgtgcagggactgccacctccaaacctctcctggagcaaa
gatggagctccgcttcagaacagcgatagggtatcgtgggacagcgatggagaagtacac
atcctcagccccggcgccagtgatgtgggaacctacagatgcaccgctaccaacgatttg
ggctctgattcagagacaacactagttctgctggctgaaagtcccacgatcgctgcctca
cggacaaacacttcagatgtgaagagtggcagtctgaaggtggtggttggaggggttgtc
agcgtccatttagatgccaaccttacactcgagtgccccgtcaaaggtgtcccgcggcca
acagtgagctggcaccgcaaggagggtccgctggccgccagcgccagccctctcccggac
ggatctctgctcctgagaaacctcacaccgcaagactacggcacctactcctgcgtggct
gccaacagcgtcggaaagtcggtggcctccagcctgctacgtgtggcgggaggagctgtg
ggcgaatctgagcaccaggcttcaaaggagatgaataggaagagggttttgatggcctct
gtgatcggcaccagcatcacggttaaacctggagataccttacggataggttgtccggtg
gtccccagtcacagaaagcccatcaagtggtcgtatcagaaccagaccctgaagcagagt
ccaggcgtgagccaccgcatgctggtggggggacgagtcttggaaatgaacacgcacgga
gggaagtttgacggacgatacgagtgccaaacacaaaccaacaaccagcagcgtctcacg
gcatggattcatgtgctttcacaggagtttgagtggcgtttgggtgagtggagcacatgc
agcgcttcctgtggcaacagaggtactcagatgaagaaggttcagtgtctgacgtcagag
ggccaagagatgcctcgttcggtctgtcatcatctttccaaaccgatcagtcaacctcgg
ccatgcaacctgctggactgccctcccagttgggtgtcaactgtgtggtccagatgctcc
agttcctgtgggcggggcttcagagagaggcgtgtctcctgtcagcaggtggaggcatca
gggagcgtgagggttttgtccagcacagcgtgtgaaggatctcctcgacctgaggacagg
gaagagtgcagctcacacgcgtgtgtggagtggctcaccggcccctgggggaagtgcaca
ggtcgctgtctggggcctgcggtggccacgcagagcagaaccgtgtcatgcaaacacttc
agcaactccacgtccaaaacctgcgacccaaaagaaaggccgtcacccgtgaggaactgc
tcgtcagagatgtgcgacgtgcactggaaggtgttcccgtggaggacgtgcacggcggcg
tgcggcagtggcttccagtcccgtcgtgttgaatgcatccatcgccaaaacaaaaaaacc
ctccccgacctgcactgcgcctggcaacggcggccttcaacctggcaacactgcaacatc
acttcctgtggcagtgagtgtaaggacagaacccactactgtcctgtggtgaaacgtctc
aagctttgccccgtggatctgtaccggcaacgctgctgtcagacctgctcacaggacacc
agcaccacctag
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