Labeo rohita (rohu): 127168428
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Entry
127168428 CDS
T09007
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lroh02000
]
127168428
03037 Cilium and associated proteins [BR:
lroh03037
]
127168428
Transporters [BR:
lroh02000
]
Other transporters
Pores ion channels [TC:
1
]
127168428
Cilium and associated proteins [BR:
lroh03037
]
Other cilia and associated proteins
Stereociliary proteins
127168428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DUF3504
Orf78
Motif
Other DBs
NCBI-GeneID:
127168428
NCBI-ProteinID:
XP_050971243
LinkDB
All DBs
Position
7:44037707..44068768
Genome browser
AA seq
1153 aa
AA seq
DB search
MSEMAEPATITRPLISSKRHKSIRKNSRRIYSPYQDDNGPSDDEDKDGERVDSNDPEELF
QNIQVQKEIIANIRTKPWPIRRKLKVLKQAREVVLKYEGRLTRTRGYQAAGADLLKKISR
VLYNIVVLFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFIVLPELLAG
APFGTTRSKTIPKEHLASAQDLDTIWSLGGYLQYSVLFYGYYGNVRKIGSAGYRLPLAYF
LVGMAVFAYSFITLLRKMAKNSRTSLAGASDENFTFCWRVFCAWDYLIGNPEAAESKGAA
IVNSIREAIVEEQEKKKDTSLAVLISLRILANILVLLSLTGSIYIIYFVVDRSQKLEQEK
PELTLWEKNEVSVVVSLITMIAPSAFELVAQLEMYHPRTSLRFQLARVLVLYLGNLYSLI
IALLDKVNSMSSALPVSPGNVSDSTSYLATISQPTEDNLSTIVPDIAEQRNSTLTMTLLD
LNNSMTTIKSTISSGQPMRMQSLLNQTVVYYNTRSQQDPCWETYVGQEMLKLSIIDMIFT
VASILLIDFIRGLVVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGAFFSP
CLPAFNVLKLIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAI
VRYRPSQYCGPFSGQEKIYDIISETIANDFPLWFSKVMSYVTSPVVVLPALLLLFMLIYY
LQSIARSLKVTNSQLRLQLQTERTDDKKKVFQLAAARLQAPEGGDKKPEQESDLTSMESS
ARSTSPPRRNGSVTNFESPVRHENSIRTITQSASRPDIPRAAGATRSPSVPVRQKHKAEP
VASSAFRMYSSPSVPQRQVRRVEYIPVRHSAYLGSTSGSCRSKSYHNMAYNPCTRYAENI
HSDPLFRKTLRPMHAEPGVITAQSYVGRRAHTTRYVIVNEHEARKKLMRSNTRIPRHYRL
ADEPEIVELYPRNVKCYIPRTPHRSHQPHLSEEEEEEEEDPKSNTRRGSFRQSNRPRSLS
DLHQTARFYIGETINSQLSMEQGLYADEEEDEQEDDWVNNPQTNIRGPESAHRYGEPYVK
PKTKHKVEPSLTESDSASLASSSDQQNSSTDQYIQVIHNKEKYLKSSAKLTKKKSKNSVK
LNVSGNDLVCSNV
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaatggcagaaccagcaactataactagacccctgatatcctccaagcgacac
aagagcataaggaagaattccagaaggatttattccccatatcaggatgataatggacca
tctgatgatgaggataaggatggagaaagagtggacagcaatgatcccgaggagttgttc
cagaacattcaggttcagaaggaaatcatcgccaacatccgaactaaaccctggccgata
agacgcaagctaaaagtgctcaagcaagccagagaggttgttctgaagtatgagggcaga
ctgaccagaacaagaggttaccaggcagccggagcagatttgctgaagaagatttcaaga
gtcttatataacattgttgtcttgttcattccctgggagatgaggattaaaaagattgaa
agtcactttggatcaggtgtggcctcttatttcatattcctgcgatggctatttgggatt
aatatagttctcactattatgactggggcctttatcgttctgcctgagctcctggctggc
gctccgttcggtaccacccgcagcaagaccattcccaaggagcaccttgcctccgcacaa
gacctggacaccatctggtcgctggggggatatttgcaatactctgtgcttttttacggc
tactatggcaatgtgcgtaaaattggcagtgccggctacagactacccttggcctatttt
ctggtcgggatggccgtttttgcctacagcttcatcactttgctaagaaaaatggctaag
aactcccgcacaagtttagccggtgcctctgatgagaatttcaccttctgctggcgcgtc
ttctgtgcatgggactacctgattgggaacccagaggcggccgagagtaaaggggcggcc
atcgtcaatagcatcagagaggccattgtagaagagcaagagaagaagaaagacacaagc
ctagctgtactgatcagtttgcgaattctggcaaacattctggtgctgctttctctgacc
ggcagcatctatatcatctactttgtggtggatcgttctcagaaactggagcaggagaaa
cctgagctaacactctgggagaaaaacgaggtgagtgtggtggtgtccctcatcacaatg
attgcgccttcagcctttgagttagtggctcaactggagatgtaccacccaagaacgagt
ctccgtttccagcttgccagagttctggtgctgtaccttggaaacctctacagtttgatt
attgccctcctggataaagtcaacagtatgagctctgctcttcctgtgagtccaggaaac
gtgtctgactcaacatcttacctagcgacgatttcccagcctactgaggacaacctgtcc
accattgtcccggatatcgcagagcagaggaacagtacactgaccatgactcttctagac
ctcaacaacagcatgaccaccatcaagagcaccatatcctccggacagccaatgagaatg
cagtctctgctaaaccagactgtcgtctattacaacaccagatcacagcaggacccctgc
tgggaaacatatgtcggccaggagatgttaaagctctccatcattgatatgatcttcacg
gtggcaagtatcctgctcattgatttcatccgaggactggtggttcgatacttgagtgac
tgctgctgttgggacttggagagcaagtttccagaatatggtgaatttaaaatagcagaa
aatgttcttcatctgatatacaaccaaggaatgatatggatgggagcattcttttctccc
tgtctgcccgcctttaacgtcctgaagctcattggcttgatgtacctgcggagctgggct
gtgctgacctgtaatgttccccatcagcaggtcttcagggcctccaggtcaaataacttc
tatctggcgatgcttctcttcatgcttttcctgtgtatgttaccaaccatttttgccatt
gtgaggtaccggccgtctcagtactgtggacctttcagtggccaggagaagatttacgac
atcatctccgaaaccattgccaatgacttcccgctgtggttcagtaaagtgatgagttac
gtcaccagtcctgtggtagtgctgcccgctctgcttctgctcttcatgctgatctactac
ctccagtccattgctagatcactcaaagtcaccaacagccagctcagactgcagctgcag
accgagcgcacagacgacaagaagaaagtatttcagttagctgcagcacgtctgcaggca
cctgagggcggcgataaaaagccagaacaagagagcgacctcactagtatggagtcgtcc
gcccgctccacctcccctccgcgccgcaacggcagcgtcaccaacttcgaatctcccgtc
cgccatgaaaacagcatccggaccataacgcagtcggcttcacggcctgacatccctaga
gccgccggagcgacgcggagcccctctgtccctgtgcggcagaaacacaaagcagagcct
gtggctagtagtgctttcagaatgtacagcagcccctcagttcctcaaagacaagtacgg
cgagtggagtacatacctgtcaggcattctgcatacttgggcagcaccagcggttcctgc
cgctccaagtcctatcacaacatggcctacaacccgtgtacacggtacgccgagaacatc
cattccgatccgctgtttcggaagaccctccggcccatgcacgctgagcctggcgtaatc
acagctcagagctatgtaggccgccgagcacatacgacacgctacgtcatcgtcaacgaa
cacgaagcacgcaagaagctcatgcgctcaaatacacgcataccgagacattaccgcctc
gcagacgaaccggagatcgtagagctttatccacgtaacgtgaagtgttacattcctcgt
actcctcaccgaagccaccagccacacctcagtgaggaagaggaggaggaagaggaagat
ccgaagagcaacacgaggaggggatcgttcagacagtctaaccgtccgcgatcgctatct
gacctccatcagactgcacgattctacattggcgaaacgataaacagtcagttgtctatg
gagcaaggtttatacgccgacgaagaagaggacgagcaggaagatgactgggtaaacaac
cctcaaacaaacatccgaggcccagagtcggctcacaggtatggcgaaccgtacgtcaag
cctaagaccaagcacaaagtggagccgtcgctgaccgagtcggattcggcatcgctggcg
tccagtagtgatcaacaaaacagcagtacggatcagtacatccaggtcattcacaacaaa
gagaagtacctgaagtccagcgccaagctgaccaaaaagaaatccaagaacagcgttaaa
cttaatgtgtctggtaatgatcttgtctgctccaatgtttaa
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