Labeo rohita (rohu): 127168470
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Entry
127168470 CDS
T09007
Symbol
trpm5
Name
(RefSeq) transient receptor potential cation channel subfamily M member 5
KO
K04980
transient receptor potential cation channel subfamily M member 5
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127168470 (trpm5)
Ion channels [BR:
lroh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127168470 (trpm5)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
SesA
Motif
Other DBs
NCBI-GeneID:
127168470
NCBI-ProteinID:
XP_050971330
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Position
7:complement(19233680..19250115)
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AA seq
1213 aa
AA seq
DB search
MLGHQDTPLGVLRQGRKCLQCGELLNESQEHGYLTGCRCYTPLAESVVHMGEKSNERFDK
PQWAPGRLGDIDFVGVSRTRGKFVRVTSSTDPAVIYQMLTKQWGLAPPHLVVALMGGDEV
AQMKPWLRDTLRKGLVKAAQSTGAWILTSGLRFGITKNLGQAVRDHSLASTSSKVRVVAI
GIAPWNMIQNRDLLLSARPDHPATYPSEDLPHGAVYSLDCNHSHFILVDEDPQRPGATGE
MRVKMLKHISLQRTGYGGTGSIEIPVLCLLVHGEPRILQKMYKNIQNSIPWLILAGSGGV
ADILVTLMDRGCWDADMVQDLLINTFTSDLHSTEIASWVKLIQRILDHGHLLTVHDPEQD
SELDTVILKALVKACKSQSQEAQDFLDELKLAVAWNRVDIAKSEIFSGDVQWSAQDLEEV
MMEALINDKPDFVRLFVDNGVNINEFLTYGRLQELYCSVSEKNLLHTLLLKKHQVHMASK
RMSGHPHTEPGDRRSRFSFHEVSKVLKDFLDDTCRGFYQKLPAERMGKGRLFHSQKNLPD
MDRRCDHPWRDLFLWAILQNRQELANYFWAMGPEAVAAALVGCKIMKEMAHLATEAETAR
SMKNAKYEQFAMDLFSECYSNSEDRAYSLLVRKTCCWSKATVLNLATLADAKCFFAHDGV
QALLTKVWWGAMRTDTAISRLVLTFFMPPLVWTNLVKLNAEEQVFKGDGEPFTELDSMET
EQALLLTNEDPVAAEGGGDSAAQSCSATFIYVVLQKWNRFWCAPVTVFMGNVIMYFAFLI
LFSYVLLLDFRPPPPHGPSAAEIILYFWVFTLVLEEIRQSFFTDEDMSILKKMKLYVEDN
WNKCDMVAISLFVVGLSCRMATSTYEAGRTVLALDFMVFTLRLIHIFAIHKQLGPKIIIV
ERMIKDVFFFLFFLSVWLIAYGVTTQALLHPNDPRIDWVFRRALYRPYLHIFGQIPLEEI
DAAKMPDDNCTTDVQEIISGTLPPCPNIYANWLVILLLVIYLLVTNVLLLNLLIAMFSYT
FQVVQENADIFWKFQRYNLIVEYHSRPALAPPFIIISHISQALLSLVKTTETKQDLLERE
LPAGLDQKLMTWETVQKENYLAKLEHEHRESSAERLRYTSSKVQSLLRMVGGFKDQEKRM
ATVETEVRYCGEVLSWIAECFHKSTLKCDRDAPKAPRSIAMSSRNPQPQEAKRQQPSGHS
SYGAEKKLPYVDQ
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgctggggcatcaggatactcctctgggggtgttacggcagggcaggaagtgtctgcaa
tgtggagaactgttgaacgagtcccaagaacatggatatttaacaggatgtcggtgttac
accccacttgccgagtctgttgttcacatgggtgagaagagtaatgagagatttgataaa
ccccaatgggcgcccgggcgtttgggagatattgattttgttggcgtcagtcggaccagg
ggcaagtttgtcagggtaaccagctccacagatccagctgtgatctatcagatgttgact
aagcagtggggcctggctcctcctcatttggtggtggcactaatgggaggtgatgaagtg
gctcagatgaagccctggctgagggacacgctaaggaaaggccttgtgaaggcagcacag
agcacaggggcgtggatcctcaccagtggtttgcgttttggcatcaccaagaacctgggt
caggccgtaagggaccactctctagcgagcacttcctctaaggtgcgagtggtggctatt
ggaattgctccctggaacatgattcagaacagagatctgctgctgtctgcaaggcctgat
catccagcgacatacccatctgaggatcttccccacggtgcagtgtactccttggactgc
aatcattctcatttcattctggtggacgaggacccccagagacctggagccactggtgag
atgagagttaaaatgctcaaacacatctctctacagcgcacaggatatgggggcacaggc
agtatagaaatccctgttttatgtcttctggttcatggagagccaaggatattacagaaa
atgtacaagaatattcagaattcaataccctggctgattttagcaggctcaggaggagtc
gcagatattttagtgaccctgatggacagaggatgctgggatgctgatatggtccaagac
ctgctgataaacaccttcaccagtgacctacatagcactgaaatcgcttcctgggtcaaa
ctgatccagagaatattggatcacggtcacctgctgacagttcatgacccagagcaagac
tcagaactggacacagtaattctcaaagcgctggttaaggcgtgtaagagtcaaagtcag
gaagcgcaggacttcctggatgagctgaaactggctgtggcctggaatagggtggacatt
gctaaaagtgagatcttcagtggagatgtgcagtggagtgctcaggacctggaggaggtg
atgatggaggcattgataaatgacaaacctgactttgtgcgtttgtttgtggataacggc
gtgaacataaatgaattcctaacttacggccgccttcaggaactctactgctctgtgtct
gaaaaaaacctccttcacaccctgctcctgaaaaagcatcaggttcatatggctagcaaa
cggatgtcaggacaccctcacactgaacctggtgaccgcaggtctcgttttagcttccat
gaggtctccaaagtcctcaaagactttcttgatgacacctgtaggggtttttatcaaaaa
cttccagcggagaggatggggaaaggtcggctttttcacagccagaaaaacctcccagac
atggaccgtcgttgtgatcacccttggagagacctcttcctttgggctatcctgcaaaat
aggcaggaattggcgaactacttctgggcaatgggcccggaggctgtggcagctgctctg
gtgggctgtaagatcatgaaggagatggcccatctggctactgaagcagagactgctcgc
agtatgaagaatgccaaatatgagcagtttgctatggatctgttcagtgagtgttactca
aacagtgaagacagagcctattcgctcctggtgaggaaaacatgctgctggagcaaagca
actgtcctaaatcttgccactttggcagatgccaaatgcttttttgctcatgatggtgtc
caggccctgctgaccaaagtctggtggggagccatgaggacagacactgccatctctaga
ctcgtactcacgttcttcatgcctcccctcgtttggaccaaccttgtcaagttaaatgca
gaggaacaagtgttcaaaggtgacggggagccgttcaccgagctggacagtatggaaaca
gagcaggccttgttactcacaaatgaagacccagttgctgctgaaggtggcggtgactct
gcagcacagagctgtagtgcgaccttcatttatgtggtgctgcagaagtggaatcgtttc
tggtgcgctccagtcactgtgttcatgggcaatgtcatcatgtactttgccttcctcatt
ctgttcagttacgtgcttcttctggacttccggcccccacctccacatggcccatcagca
gctgagatcatcctatacttctgggtttttaccctggtgttggaggaaatccgtcagagt
ttctttacggatgaggacatgagtattttgaagaagatgaagctgtatgtggaggataac
tggaacaaatgtgacatggtggccatctctctcttcgtggtgggattgtcctgcaggatg
gccacaagcacgtatgaggctggccgcactgttcttgctttggacttcatggttttcact
ttaagactcattcacatttttgccatccataagcagctcggacccaaaatcatcattgtg
gagagaatgatcaaagacgtattcttcttcttgttctttctgagcgtgtggctgatagcg
tatggagtgacgacacaggcccttctgcaccccaatgacccgcgtatcgattgggtcttc
cgcagggcactgtaccgcccataccttcatatatttggacagattcctctggaggaaata
gatgcggcaaaaatgccagatgataactgcactacagatgttcaggagatcatctcaggc
actctgccaccttgccctaacatctacgccaactggctggtcattctgttgctcgtcatc
tatttgctggtcacaaatgtgctgctgctcaaccttcttattgccatgttcagctacacc
ttccaggtggtgcaggagaatgcagacatcttctggaagtttcagcgctataacctgatt
gttgaataccacagccgcccggcattagctccacccttcatcatcatcagccacatctct
caagctctcctcagcctcgtcaaaactacagaaaccaagcaggatctgctggagagggaa
ctaccagctggattggaccagaagctgatgacatgggagacggtgcagaaggagaactac
ctggctaaactggagcatgaacacagggagagcagtgcagaaagactcagatacacttcc
tctaaggtacagagtttgctgaggatggttggcggttttaaggatcaagaaaagcgcatg
gcaacagtggagactgaggtgaggtactgtggagaggttttgtcttggattgcagagtgt
ttccacaaaagtactctgaagtgtgacagagacgcgcctaaagccccacggtccattgcc
atgagctccagaaatccacaaccacaggaagccaagcgacagcagccatcgggacattca
tcgtatggtgcagagaagaaactgccctatgttgatcagtga
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