Labeo rohita (rohu): 127168568
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Entry
127168568 CDS
T09007
Symbol
cdh16
Name
(RefSeq) cadherin-17
KO
K06810
cadherin 16, KSP-cadherin
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127168568 (cdh16)
Cell adhesion molecules [BR:
lroh04515
]
Cadherins
Major cadherins
127168568 (cdh16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Big_9
InlK_D3
Motif
Other DBs
NCBI-GeneID:
127168568
NCBI-ProteinID:
XP_050971506
LinkDB
All DBs
Position
7:21657410..21707534
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AA seq
826 aa
AA seq
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MKAAVVSMESLSAWFIALNVLSQNILLSETAHLKIGVPENYDGIFPWYLTKLPDLPLTYS
DLSVSGDDEGIFGVESGFLYALKPLDREKQPSYSLQVSFTKSMHTQSFTVEVCVIDKNDN
VPVFLEESMRGSVQLGLLKGIPFMQVEALDRDDRNTAHADLRFSLLDQIPRIPASHMFSI
DSITGEVSLTEDGASTLDPEMCGRYKLSVMVQDMAGKANAFFSTGTVLVEVTGNAWASPD
PVRLQENLPGPYPIPISQVKWSGSPVEYSLEGEFPEMLFTINREGIIYLNAPLDRETQDQ
FHIDIVVERPDGREIAKPVELRVMVGDANDNRPTFPQMQYHTVVKELATKGTEILTVQAA
DNDDPKTDNVRIFYRLVGQMPETPRNLFRVDRDSGVITVQADSMEGTAPQYTLTITAEDA
KGLNSSCTVIVKVLDENNNPPIFSHHEYGPFHLAEDSSVGTTVTVVSAWDADEWGGDSWQ
VDYRLESGNEEEVFTLVTDRQTNEAALILDKVLDFERENEYILVLSAQNPVALVRGRYGP
ASTATVTIFIDDINEGPVLSQSHYEVTVREGEEPGRVIATIRGYDPDSHPIRYSLRGDTK
KYFSIGKYSGELKTVQALDREENSTYTMEVVAEDGRNSSLSASTLVTVHILDVNDNSPVL
VGDYSWKYLCTPRWEDQALVLASRDSDGPQHGGRLNFSLRSDATVRRNWKLTPINDTHTN
LSLNVPYLPPEVYIVPFTISDSSSPPRSTFINLPVTVCPCNVRGNCRTAPKQLQGMPTIQ
STVGILLGTLGVIGVILIVIFVRLSYQNSTPPNKGCQERVPLKVSL
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctgctgttgtctcgatggaatctctgagtgcttggtttattgcattgaatgtg
ctgtctcagaacattttgctttctgagactgctcatcttaaaattggtgttccagaaaac
tatgatggtattttcccatggtacctcaccaagttgccagatctccccctgacctattct
gatctgagtgtaagtggagacgatgaagggatttttggggtggagtcaggcttcctgtac
gcccttaaacctctggacagagagaagcagccgtcttactctttgcaggtgtccttcaca
aagtccatgcacactcagagctttaccgtcgaggtgtgcgtcatcgataagaacgacaac
gtgccggtgttcttggaagagagcatgagaggcagcgtgcagctggggcttctcaaagga
atcccgttcatgcaggtggaagcgctggaccgagacgaccgaaacaccgcccacgcggac
ctgcgtttcagtcttctcgaccagataccacgcatccctgccagccacatgttctccatc
gattccatcactggagaagtgtctcttacagaggatggtgcctcaactctagatccagag
atgtgtggccgctacaagctgtctgtaatggtgcaggacatggctggcaaagccaacgca
ttcttctccactggaactgtcttagtggaggtgactgggaacgcatgggcctcacctgac
cctgtgagactgcaggagaatctgcctggaccatatcccatcccgatctcacaggtgaag
tggagtggcagtcccgttgagtatagtcttgagggagagtttccagaaatgctctttact
atcaacagggaaggaatcatttacctgaatgcccctctggacagagaaacacaggaccag
ttccatattgacatagtggtggagaggccagatggcagggagattgctaagcccgtggag
ctgcgagtgatggtgggggatgccaatgacaatagacccacgttcccacagatgcagtac
cacactgtggtcaaggagcttgcgactaaaggtacagagattctcacagtccaagcagcc
gacaacgacgatccgaaaactgataacgtgcggatattttatcgcctggtgggacagatg
cctgagactccccggaatttgttccgtgtcgaccgggactcgggagtgatcacggtgcag
gcagacagcatggagggcaccgctccacagtacacactcaccatcacggcagaggacgct
aaagggctgaacagctcctgcacggtcatagtcaaagttctggatgaaaacaacaaccca
cccatcttttctcatcatgagtatggacccttccacctggctgaggattcctcagtgggc
accacagtcactgtagtgtcagcatgggatgcagacgagtggggtggagacagctggcag
gtggactacagacttgaatctgggaatgaggaggaggtttttacgctagtcactgacaga
cagactaatgaagccgccctcatcctcgataaggtgctggactttgagcgggagaatgaa
tacatactggtactgagcgctcagaacccagttgcgctggtccgaggcagatacggaccc
gcatccacagcaactgtcaccatttttattgacgacatcaatgaaggccccgttttatct
caaagccattatgaagtcactgtcagagaaggggaggagccaggacgtgtcattgccaca
atcagaggttatgaccccgactcgcatccaatcaggtattcgctgagaggagacacaaag
aaatatttctccattgggaagtactcaggagagctcaagacggtccaggctttggacaga
gaggagaacagcacatacaccatggaagtagtggctgaagatggccgtaattcctctttg
tcggcttccacactggtgacagtgcacattctggatgtaaatgacaacagcccagttctg
gtgggcgattactcctggaagtacttgtgcacacctcgctgggaggatcaggctctggtt
ctggcctctcgggacagcgatgggccccagcatggaggaaggctcaacttctccctccgc
agcgacgccacagtccgccgcaactggaagctcactcccatcaatgacactcacaccaac
ctgtctttgaatgtcccgtacctgcctccagaggtttacatcgtgccctttaccatctca
gacagcagctctccacccagaagcacgttcatcaatctgccagtgacggtttgcccatgc
aacgtgagggggaactgcagaacagcaccaaaacagcttcagggcatgcccactattcag
tcaacagtgggcatcctgctcgggactctgggagttataggcgttatactgattgttata
tttgtgagactgtcctaccagaattcaacacccccgaacaaaggctgccaggaacgagtg
ccacttaaagtctctctctaa
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