Labeo rohita (rohu): 127168619
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Entry
127168619 CDS
T09007
Symbol
dis3l
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127168619 (dis3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127168619 (dis3l)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
127168619 (dis3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_S1
Rrp44_CSD1
OB_HELZ2
Motif
Other DBs
NCBI-GeneID:
127168619
NCBI-ProteinID:
XP_050971589
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All DBs
Position
7:28899646..28912066
Genome browser
AA seq
1062 aa
AA seq
DB search
MEGPVMIKTEKVLHLNSSKGRKVRVVREHYVRERVPCGSALCQADCHNDGKVLSGDVTHY
VVPDVGVVRDFLEILEFRELQGIVLTQTAYQTVQHTRGRRHYNRLRALLKDPRHDCVLFA
NEFQQYCYCPRDKGESQDKWHTRNVYNAAVWYYNHLAGLQPVVMITEDTDAISEYSALNS
GVYVISTQEYLLSFWPDLQAAHDLYNSIAQTLQERESEGVEKVYTEHLPAEVLEAGIKSG
RYIQGILSVNKHRAQHEAFVRYEGSASKNTELNSDVLINGAKHRNRGVHGDMVVIELLPR
NEWKGRTMALTEGQGEEQTLEDTQSQPMPTGRVVGILQRNWRDYVVTFPPLEEVQSQSRN
SQKILVIPWDYRIPKIRISTQQAEALQDQRVIVRLDSWESTSVYPNGHCVRVLGKAGELE
TEIQTILLENCIHVPLFSEAQLREMPVNTKENPWQMDSSEVSSRRDLRDTHLVFSIDPKG
CEDVDDTLSVRTLPGGKRLELGVHIADVTYFVREGSLTDLEARSRATTYYMADRRYDMLP
AVLSADLCSLLGGVDRYAMSVLWELDAETLDVCTVWYGRTLIRSSYQLHYELAQSLLNGE
EAEVPELSQLKGSQRDQKLAELLWALETLTRVARHLRAQRDKGGALELEGVEVRAQLDEE
KNITALVPKQPLEVHETVAECMIYANHWVARKIQESFPHQALLRHHPPPKQEFFSSLIDC
AKARGFSIDTRSNRALADSLERAVDPQDPLVNKILRMMATQAMSNALYFSTGACPEEQYY
HYGLALDRYTHFTSPIRRYADVLVHRLLMAAIQLDKEGSLSKPLASNKELEELAQHINNK
NRAAQHAQKQSTELFQCLYFRDKDSNTDERCVADALVYAVRANGFLAFVPQYGLKGAVYL
KDREGQVVSVDGDGRCEWKAGTLQRYTDRISTCTSTGTHTFYLFDHVTVRISVQPSRCHT
DTLCLELISNKPHCAVQPESQPAGRGRSELVQEVVRWAEEASLQAEEERGRKSKLSREER
QFRQSKTPNLYVVLQEISELALLDLSICQIRNTEEQTCTASS
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtccggtcatgattaaaaccgagaaagttttacatttgaacagctcaaagggt
agaaaggtccgtgtggttcgggagcactatgtgagggaacgggtgccgtgtggaagcgcc
ctctgtcaagcggactgtcataacgatgggaaggtgctgtctggtgatgtgacccactat
gtggttcctgatgtgggagtcgttcgggatttcttggagatactggagttcagggagctt
caggggatcgtgttgacccagacggcctaccagactgttcagcacacccgtggacgcagg
cactataacagactgcgtgctttactaaaggaccctcgccatgattgtgtgctctttgcc
aatgagtttcagcaatactgctactgcccaagagacaagggtgagtctcaggacaaatgg
catacaagaaatgtgtacaatgcagcagtttggtactataatcatctagctggactccag
ccggtagtcatgattacagaagatactgacgctatttcggaatatagtgccttgaacagt
ggagtttatgtcatttcaactcaggagtacctgttaagtttctggccagacctgcaggct
gcccatgatctgtacaactccattgctcagactcttcaagagcgagagagtgagggagta
gagaaagtgtatactgaacacctgcctgcagaggtgctggaggctggtataaaatctggg
aggtacatccaaggcatcctcagtgtgaacaaacatcgagcacagcatgaagcttttgtc
cgttatgagggttctgccagcaaaaatacagagctaaatagtgatgtcctgatcaatgga
gcaaagcatcgtaaccggggggtgcatggagacatggttgtcatagagctcttgcctcgt
aatgagtggaaaggcaggactatggcactaacagaggggcagggggaagagcagacactg
gaggacacacaaagtcagcccatgcccacaggcagggtggtgggtattctgcagaggaac
tggagagactacgttgtgacttttcctcctcttgaggaggtgcagtcacagagtcgaaat
tcacaaaagattctggttattccatgggactaccgcatccctaaaatccgtatcagcaca
cagcaagctgaggctctgcaggatcaaagagtgattgtgcgtctggattcatgggaaagt
acttctgtttacccaaatggccactgtgttagggtgctggggaaagcaggcgagctggag
actgagattcagaccatcctgttggagaactgcatccatgtaccactattctcagaagca
cagttgcgagagatgccagttaacacaaaggagaacccgtggcagatggacagcagtgaa
gtgtcctctcggcgggacctgagagacacacacctggttttcagtattgatcccaagggc
tgtgaggatgtggacgataccttgtctgtgcgcactctacctggggggaaaagattagag
ctgggtgtccacattgccgacgtcacttactttgtcagggagggctctcttacagatcta
gaggcacggtcaagggcaaccacttactacatggctgaccgcagatatgacatgctgcca
gcagtgctgagtgctgatctgtgctccctccttggaggagtggaccgatatgccatgagt
gtgctgtgggagctggatgctgagactctggatgtgtgtacggtttggtacggtcgcact
ctaatccgctcctcctatcagcttcactacgagctggcccagagtctgctgaatggcgag
gaggccgaggtacctgagctaagccagctcaagggttcacagcgagaccagaaactggct
gaacttttgtgggccctagaaaccctgacaagggtggccagacacctccgtgcacagaga
gataagggtggtgctctggagttggaaggggtggaggtgagggctcagctggatgaggag
aagaacattacagcccttgtgcccaaacagcctctggaagttcatgagactgtggctgag
tgtatgatctatgccaaccactgggtggcgcgcaagatacaggagagctttccacaccaa
gctcttctgcgtcatcacccaccacccaaacaggagttcttcagcagcctaatcgactgt
gccaaggcccgtggcttcagtatcgatacaaggtcaaacagagctctggctgattctctg
gaacgagccgtggatcctcaggaccccctggtgaacaagatattaagaatgatggccacc
caggcaatgtctaatgccctttacttctctacaggagcctgtccagaagaacagtactat
cactacggtcttgctctggatcgatacactcactttacctctccaatcagacgctatgcc
gatgtattagttcaccggctgctcatggctgctattcaactggataaggaaggatcacta
agcaaacccttggccagtaacaaagaacttgaagaactagctcaacatatcaacaataaa
aacagagcagcacaacatgcacagaagcagtctacggagcttttccagtgcctctacttc
cgagacaaagactcgaacacagatgagcgctgtgtggctgatgctttggtctatgctgtc
cgagctaatggttttctggccttcgtaccacagtatggtttgaagggagctgtgtacctt
aaggatcgagaaggtcaggtggtcagtgtcgatggagatggaaggtgcgagtggaaggct
gggacactgcagagatacactgacaggatcagcacctgcaccagcactggaacgcatacg
ttttacctctttgaccacgttacagttcgtatctctgtacaaccgtctcgttgccatacc
gacaccttgtgtttggagcttatcagcaacaagcctcattgtgctgtgcaacccgagtca
cagccagctggtcgcggtcggtctgagctggttcaagaagtggtgcgctgggcagaagag
gcctcgctccaggcggaggaagagagggggaggaagtccaaactgagcagggaggagagg
cagttcagacagagcaaaacaccaaacctctatgtcgtgttacaggagatcagtgaactt
gccctactggatctgtccatctgtcaaatcagaaatacagaggaacagacttgcaccgca
tcttcttag
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