Labeo rohita (rohu): 127168633
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Entry
127168633 CDS
T09007
Symbol
tpma
Name
(RefSeq) tropomyosin alpha-1 chain
KO
K10373
tropomyosin 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04260
Cardiac muscle contraction
lroh04261
Adrenergic signaling in cardiomyocytes
lroh04814
Motor proteins
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
127168633 (tpma)
04820 Cytoskeleton in muscle cells
127168633 (tpma)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
127168633 (tpma)
04261 Adrenergic signaling in cardiomyocytes
127168633 (tpma)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127168633 (tpma)
04147 Exosome [BR:
lroh04147
]
127168633 (tpma)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
127168633 (tpma)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of microglial cells
127168633 (tpma)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
Crescentin
TMF_DNA_bd
Laminin_I
ATG16
PUMA_CC
DUF745
Lebercilin
CENP-F_leu_zip
SlyX
DUF1664
DUF16
Motif
Other DBs
NCBI-GeneID:
127168633
NCBI-ProteinID:
XP_050971606
LinkDB
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Position
7:complement(32417826..32423918)
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AA seq
284 aa
AA seq
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MDAIKKKMQMLKLDKENALDRAEQAEADKKGAEDRSKQLEDDLVALQKKLKATEDELDKY
SEALKDAQEKLELAEKKATDAEGDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIVEGELERTE
ERAELNESKCSELEEELKTVTNNMKSLEAQAEKYSAKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccattaagaagaagatgcagatgctcaagctcgacaaggagaatgccttggac
agagcagagcaggctgaggccgataagaagggagcagaggacagaagcaagcagctcgag
gatgacctggtcgccctgcagaagaagctgaaggcaactgaggatgagttggacaaatac
tctgaagcccttaaggatgctcaggagaagttggagctggctgagaagaaagctaccgat
gctgagggcgacgtcgcttccctgaacagacgtatccagctggttgaggaggagttggat
cgcgctcaggagcgtctggccactgctctgcagaagctggaggaggctgagaaggctgct
gatgagagtgagagaggcatgaaggtcattgagaacagggccctgaaggatgaggagaag
atggaactgcaggagatccagttgaaggaggccaagcacatcgctgaggaggccgaccgc
aagtatgaggaggtggcccgtaagctggtgattgttgagggtgagctggagcgtactgag
gagcgtgctgagcttaatgagagcaagtgctctgagctggaggaggagttgaaaactgtg
accaacaacatgaagtctctggaggcccaggctgagaagtactccgctaaggaagacaaa
tatgaggaggagatcaaggtcttgactgacaagctgaaggaggctgagactcgtgctgag
ttcgctgagagatcagtcgccaagcttgagaagaccattgatgatctggaggatgaattg
tatgctcagaaactcaagtacaaagccatcagcgaggagctggaccacgctctcaacgac
atgacctccatttaa
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