Labeo rohita (rohu): 127168635
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Entry
127168635 CDS
T09007
Symbol
itga6b
Name
(RefSeq) integrin alpha-6b
KO
K06485
integrin alpha 6
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
lroh04514
Cell adhesion molecules
lroh04810
Regulation of actin cytoskeleton
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127168635 (itga6b)
04514 Cell adhesion molecules
127168635 (itga6b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127168635 (itga6b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
127168635 (itga6b)
04810 Regulation of actin cytoskeleton
127168635 (itga6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127168635 (itga6b)
04515 Cell adhesion molecules [BR:
lroh04515
]
127168635 (itga6b)
04090 CD molecules [BR:
lroh04090
]
127168635 (itga6b)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127168635 (itga6b)
Exosomal proteins of breast milk
127168635 (itga6b)
Cell adhesion molecules [BR:
lroh04515
]
Integrins
Integrin alpha subunits
127168635 (itga6b)
CD molecules [BR:
lroh04090
]
Proteins
127168635 (itga6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
127168635
NCBI-ProteinID:
XP_050971643
LinkDB
All DBs
Position
1:complement(29160148..29185345)
Genome browser
AA seq
1049 aa
AA seq
DB search
MGPYRTLTLPLLSLLGWTLISAFNLDTDNVIRKTGDANSLFGFSLAMHRQLRPADKRMLL
VGAPKAKALPGQKSKVTGGMYNCDINSAGQSCQRVMFDNDENLAAENKQNQWMGVTVQSQ
GPGGKILVCAHRYQRRLFVGLAQELRDLTGRCYVLSEDLTINSASDEDGGDWMFCNGRNR
GHERFGSCQQGISATFTKDYHYLVFGAPGAYNWKGVVRMEQKNSSLWEDNIFDDGPYEVG
DEDQLDPELVPVPANSYLGFSLDSGKMLTKRGQLTIVAGAPRANHSGAVVLLKKDNEKSS
LLTAEYILEGAGLASSFGYDLAVLDINGDGWQDIVVGAPQYFIKDGDIGGAIYVYLNQEG
NWDKITPKRIDGDAYSMFGLAVENMGDVNLDGYHDVAVGAPYDSNGAGNVYVFHGSIQGL
KKSQVLGGKDHGVKLFGYSLAGNMDLDRNNYPDLAIGSLSDSVFVYRSRSVISIEKTVTT
TPKELDLATKNCGDTVCFEVKACFKFSVKPKTYNPTLKVEYTIRVESERKKLNLPSRVIF
TQLSNNEYESTGVVELKGQGTESCVTRDLKLQKNLKDKLRGIPIEVSVKILNQSARKKRQ
TALPDLLPILDSNQDATTVAKVQFVKEGCGNDHVCQSDLKLQYKFHSREPNRDVFHPLPE
ENGVPILSLSDQKDIALEINVVNKGEGAYEAQLSSSFPKSLSYSAVRIKSGDKAVTCVAN
HNGSQADCELGNPFTGNAETTFYIILNTGGISLDTTDIEIDLKLKTTSDQKDLQTVKAKA
IVKIQLLLSLSGIAKPSQVYFSGKVKGESAMKLTTDVGSPIDYEFRVTNLGKPLKSFGTP
YMIIQWPKHNSQGKWLLYLMKITSTGLGTFSCSKEDEVNKLVLKEPTVSRTKREIGDTPA
KEGTASLLTDKRKSIILSCENGAECVTFRCPLSGMDSNAVISLRAYLWNSTFIEEYAKLN
YIDIIVKASLDFKTSATNIQLKNEPAQVRVTVFPERRVAQYGGMPWWVILVAILLGLLLL
GLLVFLLWKCGFFGKSGKEPEKERLTSDA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgggaccttacaggactttaactttaccgcttctcagtttgttgggatggacactgatc
tctgccttcaacctggacacagacaatgttatcaggaaaacgggagatgccaacagcttg
tttggtttctctcttgccatgcaccgacaactcagaccggctgataaaagaatgttgctt
gtcggtgccccaaaagctaaagcattgcctgggcagaagtcaaaagttacgggaggcatg
tacaactgtgacataaattctgccggtcagtcatgccaacgagtgatgtttgacaatgat
gaaaacctggcagctgaaaataagcaaaaccagtggatgggggtaactgtacagagccag
ggacctggaggaaagatattggtctgtgcacatcgttaccagcgacgcttatttgtgggc
ttagctcaggagctgcgtgacttgacaggtcgttgctacgtactaagtgaggacctgacg
attaatagtgcctcagatgaagatggaggggactggatgttctgcaacgggagaaacaga
ggacatgagcgcttcggatcgtgccagcagggtatatctgccacattcacaaaggactat
cactatctggtgtttggagcaccgggtgcttacaactggaaaggagtggttcggatggag
cagaagaacagctctctgtgggaagataatatctttgatgacggcccgtatgaagttgga
gatgaggaccaacttgatccagagctagtgccagtccctgctaacagttatttaggcttc
tctctggactctggaaaaatgctgaccaagagaggtcagctgactatagttgctggggct
ccaagagccaatcacagtggggcagttgtgctattaaagaaggacaatgaaaaatcatca
ttgttgacagctgagtacatcctggagggtgccggacttgcttcttcctttggttatgat
cttgcagtgcttgacatcaatggagatgggtggcaggacattgttgttggagctcctcag
tactttattaaggacggtgatatcggtggggccatctatgtctatcttaatcaggaaggg
aactgggacaagatcacccccaagagaattgatggagatgcttattccatgtttggtttg
gctgtggaaaacatgggcgatgtgaacctggatggttatcatgatgttgctgttggtgcc
ccatatgacagtaatggagctggaaacgtatatgtcttccatggttcaattcaaggccta
aaaaaatcccaggttcttggaggaaaagatcacggtgtgaaactctttggatactctctt
gctgggaacatggatttggacagaaataattaccctgatctggctatcggatctctttct
gattcagtgtttgtgtacaggtcacggtcagttatcagcattgaaaagactgtcaccacc
acaccaaaggagctagacctcgctacgaaaaactgtggagacactgtatgctttgaagta
aaagcctgtttcaaattttcagtcaagcccaaaacctacaatcctactctgaaggtggaa
tacactatcagggttgaatctgaaaggaagaaacttaatcttccttctagagtcatcttc
acccagctctcaaataatgagtatgaaagcacaggggtcgtggagctcaagggtcagggc
acagaaagctgcgttacgagagacctcaaacttcagaaaaacctaaaagacaaactgaga
ggtattcccattgaagtctctgtgaagatcttgaaccaatccgcacgcaagaagagacag
actgctctccctgacctgcttcccatcctggactctaaccaagatgccaccactgttgcc
aaggttcagtttgtcaaggaaggatgtggtaatgatcatgtctgtcagagtgacctgaaa
cttcagtataaattccacagcagggaaccaaacagagacgtctttcatccattacctgag
gaaaatggagttcccatcctatctctaagcgatcagaaagacattgccttggagatcaac
gtggtcaacaagggtgaaggtgcttatgaagcgcagctgtcttcctcgttccccaaatcc
ctctcttattctgccgttcgcattaagtctggtgataaagcagtcacctgtgtagccaat
cataatgggtcacaagctgattgtgaacttggaaatccattcacaggaaatgcagagaca
actttttacatcattctgaacacgggaggaatttctttggataccactgacattgaaatt
gaccttaaactcaaaacgacgagtgatcagaaggacttacaaacagtcaaagccaaagcc
attgttaagatccagctactgttgtccctctcaggcattgctaagccatctcaggtctac
ttttctggaaaagttaaaggagagagtgccatgaagttgacaactgatgtcggcagtcca
attgactatgaattcagggttacaaacttgggcaaaccccttaaatcattcggcacgcct
tatatgattatccaatggcctaagcataactctcaaggcaagtggctgctgtacctcatg
aagataacctcaactggtttaggcaccttcagctgctccaaagaagatgaggtcaacaaa
ctcgttttgaaggagcctacagtgtcacgaactaaacgtgaaattggggacactcctgca
aaagagggaacagcctctcttttgactgacaagaggaaatccatcattttgtcgtgtgag
aatggggcggagtgtgtaacattcagatgtcctctaagtggaatggacagcaatgctgtt
atcagcctgagagcttatctttggaattctaccttcatagaggaatatgcaaaattgaac
tacattgatattatcgtcaaggcatcgcttgatttcaagacctcagctacaaacatacag
ctgaaaaatgaaccagcacaggtacgcgttaccgtgtttccagaacgcagagttgcacag
tacggcggtatgccctggtgggtcatactggtggccattttactaggactccttttgctg
ggccttttggtcttcttgctttggaagtgtggttttttcggcaaaagcggcaaagaacct
gaaaaagagaggctgacttcagatgcgtaa
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integrated database retrieval system
