Labeo rohita (rohu): 127168716
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Entry
127168716 CDS
T09007
Symbol
eef1a1b
Name
(RefSeq) LOW QUALITY PROTEIN: elongation factor 1-alpha 1b
KO
K03231
elongation factor 1-alpha
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127168716 (eef1a1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127168716 (eef1a1b)
03016 Transfer RNA biogenesis [BR:
lroh03016
]
127168716 (eef1a1b)
03012 Translation factors [BR:
lroh03012
]
127168716 (eef1a1b)
04131 Membrane trafficking [BR:
lroh04131
]
127168716 (eef1a1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127168716 (eef1a1b)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
127168716 (eef1a1b)
Transfer RNA biogenesis [BR:
lroh03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
127168716 (eef1a1b)
Translation factors [BR:
lroh03012
]
Eukaryotic type
Elongation factors
127168716 (eef1a1b)
Membrane trafficking [BR:
lroh04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
127168716 (eef1a1b)
Exosome [BR:
lroh04147
]
Exosomal proteins
Proteins found in most exosomes
127168716 (eef1a1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Gtr1_RagA
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
127168716
NCBI-ProteinID:
XP_050971758
LinkDB
All DBs
Position
1:complement(29117559..29127111)
Genome browser
AA seq
463 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGDNMLEASPNMTWFKGWKITRKDGSVSGTTLLEALDAIQPPTR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGLVVTFAPVNVTTEVKSVEMHHEALS
EALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPQEAASFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVDMIPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKGXVEKKTPTSGKVTKSAQKAQKNK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggagaagctccatatcaacatcgtggtcattggccatgtggattcagggaag
tccaccaccaccggccacctcatttacaagtgtggaggcattgacaagaggaccattgaa
aagttcgagaaggaagctgcagagatgggaaaaggctcttttaagtacgcttgggtcctt
gacaagctaaaggctgagagagagcgaggcattaccatcgatatctccctgtggaagttt
gagaccagcaaatactatgtcaccatcattgatgctccaggacacagagactttattaag
aacatgatcactggcacctcacaggcagactgtgctgtgttgattgtggcggctggcgtt
ggagaatttgaggctggtatttcaaagaacggccaaacacgagagcatgccttgctggca
tacaccctgggtgtcaaacaactgattgtgggtgtcaacaagatggactctacggaaccc
aattacagccagaagcgctatgaggagattgtaaaggaagtcagcacttacatcaagaaa
attggctacaaccccgatacagtggcatttgttccaatctctggatggaatggagataac
atgctggaggccagcccaaacatgacctggttcaaggggtggaagatcacccgtaaagat
ggtagtgtctctgggacgactctgttggaggctctggacgccattcagcctccaactcgc
cccactgacaaaccccttcgcctcccactgcaggacgtttacaagattggaggaattggt
actgtgcctgtgggacgggttgaaacaggcattctgaaacctggcctagttgtgacattt
gcccccgtgaatgtgaccactgaggtgaaatctgtggagatgcatcacgaggctctgtct
gaagctcttccaggcgataatgtgggatttaatgtgaagaatgtctcagtcaaagatatc
cgacgtgggaatgttgcaggtgacagcaagaacgatcctccgcaggaggcagcaagcttc
actgcacaggtgatcattttgaaccatccaggtcagatcagtgctggttatgcccccgtg
ttggactgccacactgctcacattgcctgtaagtttgctgagttgaaggagaagattgac
cgtcgctctggaaagaagctggaagacaatcccaagtccctgaagtctggggatgctgct
attgtcgatatgataccaggcaaacccatgtgtgtggagagtttctctgagtatcctcct
cttggtcgatttgctgtgcgtgatatgcgtcaaactgtagcagtgggcgtcatcaagggg
nnggttgagaagaagaccccgacctctgggaaagtcacaaaatctgcccaaaaggcccag
aagaacaaatga
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