Labeo rohita (rohu): 127168747
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Entry
127168747 CDS
T09007
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127168747
Cell adhesion molecules [BR:
lroh04515
]
Cadherins
Protocadherins
127168747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
RET_CLD1
SseC
DUF4328
Motif
Other DBs
NCBI-GeneID:
127168747
NCBI-ProteinID:
XP_050971765
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All DBs
Position
1:complement(31440585..31444741)
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AA seq
959 aa
AA seq
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MRRTSSSRVLWHWWAMAVAFVSLSFLSTVAAAMTMKYQTYEEAALSTVIGNLAKDMSLNF
SDSSKTSFRMMKQFNASFIRLRESDGQLTIGERIDREKICKHTIKCLIAFDVVSVSNEQF
KLIHIEVEVKDINDHAPEFPRKESTLEISENAALGTRILLDVAMDEDVGSNYIQSYQVSV
NSHFTIDVLTRADGIKYAELVLMKELDRETHASYVLELVATDGGNPTRSTSTKINVKVKD
FNDNSPVFDRNSFSVDILEDAPVGFLLVDFNAVDPDEGLNGEVVYGFGKQVPSEIRQRFN
VDRKSGQLTLESPIDFESKKTYEFDIQASDLGPNPSSSICKVVVHVQDVNDNAPEITITP
MTSVTAGIAYITEAAAKESFVALVSIADKDSGANGDIHCTLYGHNHFKLQQAYEDSFMIV
TTSPLDREKIAEYNLTVVAEDLGSPPFRTSKQYTIRLSDENDNAPVFSKPVFEVSLMENN
APGAYITTVVARDLDQGQNSKISYKLSDTYIIGSPVSTFVSLDPATGSLYALRSFNFEVL
KQLQLRIQASDGGSPQLQGSAIINLKIVDQNDNAPSITQPALINNSAEVLLPKDAPSGYV
ITQVHARDADEGVNAELSFRISEDVASMFSINRATGEIYLNHELNYEVYENLRITVIVSD
NGRPSLTTAFAINFIMAGSLPSDRNVFRHNIDEETQEGDHSIIIIVVLAGSCALLLVAII
IIATTCNKGKVDNRGHSHSGKEDRVQEKGNHSDPLISIHSDIVFDIHPYSNKTTFSGLIQ
RGSDISCSSEDGTCVSEGSPCELGDKSLGVKSEGFSTVPSYSKDAMRQIRIWKGTSYATI
SAREPHSGKDSGIGDSDFNDSDSDISCDGMRKDEHQNNTQNGLWACTSECKILGHSDHCW
SPTASRTNCNLAHSFTKKVSLSQDTLRRENYNQAHIPKTVGLQSVCKKVLDREYDYITS
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggacttctagcagtcgagttttgtggcattggtgggcaatggctgttgccttt
gtgtcactgtcttttctgtctactgtagcagcggcaatgaccatgaaatatcagacatat
gaagaggcagctctatccactgtcatcggaaacctggcaaaggatatgtccttaaatttc
tccgatagctctaagaccagtttcagaatgatgaagcagttcaatgcatcttttatcaga
ctccgagaaagcgacggacagctaacaattggagaacgaatagacagagaaaaaatatgt
aagcatacaatcaagtgtctcattgcattcgacgttgtgagtgtctcgaatgagcaattt
aaattaattcatattgaagtggaagtaaaggacatcaacgaccacgctcccgagttcccc
agaaaggaatccactttggaaatttcagaaaacgcagcactcggcactagaattcttttg
gatgttgctatggacgaggacgtgggttcgaactacattcaaagttatcaagtatcagtc
aacagtcactttaccattgatgtgctgaccagagctgatggaattaaatacgcagagttg
gtactaatgaaagaattagacagggagacacatgcctcctatgttttggagctcgtcgca
acagacggaggaaatccaacaaggtccaccagcacaaaaatcaatgtcaaagtaaaagac
tttaatgacaatagcccagtgttcgaccggaacagtttttcagttgatatactggaggac
gcgccagtgggattcttgcttgtggactttaacgcggttgatccagacgagggtttgaat
ggggaagttgtgtatgggttcggaaagcaggtgccctcggagatccggcagcgtttcaat
gttgaccgaaaatccggtcagctgacgctcgagagcccgattgattttgagagcaagaaa
acctatgagttcgatatacaggcatccgacttgggtcctaatccgagctcatccatctgt
aaagtagttgttcatgtgcaggatgtgaatgacaacgcaccagaaatcaccattaccccc
atgacctcagtcaccgcgggaatagcgtacatcacagaggctgctgctaaagaaagcttt
gtggctcttgtcagtatcgcggacaaagactcgggcgccaacggagatattcattgtacc
ctctatggacacaatcacttcaaactccagcaagcctacgaggacagctttatgattgta
acgacatctccacttgatagagaaaaaatcgcagagtataacttaacggttgtagccgaa
gacttaggatcacctccgttcagaacaagtaagcagtatactataaggttaagtgatgag
aatgataacgcccctgtgttcagtaaaccagtctttgaagtctccttgatggagaacaac
gcaccaggcgcatatatcacaactgtggtggccagagaccttgaccaagggcaaaacagc
aaaattagctataaactctcggacacctacatcataggctctccggtgtcaacttttgtc
tctctagatccagctacaggctcgctctatgcgctcagaagtttcaactttgaggtcctt
aaacagctacagctacgtattcaggcaagtgacggaggctcgccacaactccaaggcagt
gcgatcattaatctaaagatagttgatcagaacgacaacgctccttctatcacacagcct
gcgctcatcaataattctgctgaggttctgctgcccaaagacgcgccttcaggttacgtt
ataacccaggtacatgctagggatgctgacgaaggtgtcaacgcggaattgtcgttcaga
atctccgaagatgtcgcttctatgttctctattaacagagccacaggagaaatttatctg
aatcatgaactaaattacgaagtttatgagaacttgagaataacagtaatagtcagtgac
aacgggagaccttccctaactacagcattcgctatcaatttcataatggcaggatctctc
cccagtgaccgcaatgtattcaggcacaacatagatgaggagactcaggaaggggatcat
tcaataattataattgtcgttctggcggggagctgcgcattacttcttgtagccattatt
ataatagcgaccacttgtaataaaggaaaagtggataatcgaggccacagccattctgga
aaggaggacagagttcaggagaagggaaaccacagtgaccctctaatttcaattcacagt
gacatcgtttttgatattcacccttactcaaacaagacaactttttctggcttgatccag
agaggcagtgacatatcctgcagctctgaagatggtacgtgtgtctctgaaggaagtcca
tgtgaactaggggacaaaagcctcggtgtcaagtcagaggggttttccactgtacctagt
tatagtaaagatgcaatgagacagattcgaatttggaaaggcacctcgtacgcaactata
tcagcacgagagcctcatagtggaaaggacagcggaattggagacagcgacttcaatgac
agtgattcagatataagctgcgatggcatgagaaaagacgagcatcaaaacaatactcaa
aacggtctgtgggcatgcacaagcgagtgcaagattttggggcattcagaccactgctgg
agtccaactgcttccaggacaaactgcaatttagcacattcatttactaagaaagtttca
ctttcacaagacactctcaggagggaaaactacaaccaagcccacattccaaaaacggtg
ggattgcagagtgtctgtaagaaagtactggacagagaatacgactatataaccagttaa
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