Labeo rohita (rohu): 127168774
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Entry
127168774 CDS
T09007
Symbol
psip1a
Name
(RefSeq) PC4 and SFRS1 interacting protein 1a isoform X1
KO
K25057
PC4 and SFRS1-interacting protein
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127168774 (psip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127168774 (psip1a)
Spliceosome [BR:
lroh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
127168774 (psip1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Med26
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
127168774
NCBI-ProteinID:
XP_050971804
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Position
1:complement(31322656..31398908)
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AA seq
424 aa
AA seq
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MARDFKPGDLIFAKMKGYPHWPARIDEIPYGAVKPSNIKFPIFFFGTHETAFLGPKDIFP
YLPNKDKYGKPNKRKGFNEGLWEIENNPKVELNGHKIMNAGAGSVKDLSSSQEGDDEKRR
KSAQVAGSEVEVEEDEEGEEEKEEKEKDDCGDMEVSDQGHMKDEDPSQKDTTNVSAKVKR
GRKRKIEAEQDSDTENSSPTSSAPGLDLLSAGGPVPLLKRRGRKPKMEKSLLLQRASKEP
LRLGKDGKRDDRKGDKRKEVSTESRLQKLHGDIKTSLKIDNLDVRKCLVALDELSSLHVT
TQHLQRHCELIATLKKIRRFKASQDVMDKATMLYNKFKSMFLMGEGESVLSQVLNKSLTE
QRQFEEAKRGVLKNTEQTKEQKDTNILNGDFNPEEDAETGKDRSGENVLSVVKNNVTSPS
EESV
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggctcgggatttcaaacctggcgatctgatttttgctaaaatgaagggttatccccac
tggccagcaaggattgatgagattccttatggagctgtcaaaccgtcaaatataaagttt
cctatcttcttttttggcactcatgaaacagcatttttgggtcctaaagacatctttccc
tatttgcctaataaagacaagtatggcaaacctaacaaaaggaagggctttaatgaaggc
ttgtgggagattgaaaacaaccctaaagtggagcttaacggacataagataatgaatgct
ggagcaggttctgttaaggacttaagcagcagccaagagggggatgatgagaagaggaga
aagtctgctcaagtggctggaagtgaggtcgaggtggaggaggacgaggagggggaggag
gagaaggaggagaaggagaaggatgattgtggtgacatggaggtttctgatcagggtcat
atgaaagatgaagacccatcacagaaagataccacaaatgtctctgccaaagttaaaaga
ggaaggaagagaaagattgaagctgaacaagactctgatacagaaaactcaagccccact
tcaagtgctcctgggttagatttattatcagcaggtggaccagttccattactaaagcgc
agaggaaggaaacctaaaatggagaaatcactactacttcaacgggcttcaaaagagcca
ctgaggttaggaaaagatggaaagagagatgacagaaaaggagacaagagaaaggaagtt
tctacagagtccagactacagaagttgcatggggatattaaaacatctttgaagattgat
aaccttgatgtgaggaaatgtttagttgcattggatgagttaagttcattgcatgttaca
actcagcatcttcagagacactgtgaactcatagctactctaaaaaagatccgcaggttc
aaagccagccaggatgtgatggacaaagccacaatgctttataataagtttaaaagcatg
tttttgatgggagaaggagaatcagtactcagtcaggtgctcaataaaagtctaactgaa
cagagacagtttgaagaggccaagaggggagtgctaaaaaacacagaacagaccaaagag
cagaaagataccaatattttgaatggagacttcaatcctgaagaggatgctgagacagga
aaggacagatcaggagagaatgtcttatctgtggtgaaaaacaatgtgaccagtccttca
gaagagtctgtctga
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