KEGG   Labeo rohita (rohu): 127168833
Entry
127168833         CDS       T09007                                 
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
  KO
K12587  exosome complex component MTR3
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    127168833 (exosc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lroh03019]
    127168833 (exosc6)
Messenger RNA biogenesis [BR:lroh03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     127168833 (exosc6)
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 127168833
NCBI-ProteinID: XP_050971880
LinkDB
Position
7:32867952..32869003
AA seq 270 aa
MPVDTKRIRGPEESQSPLLFLSPDKAPKASIRQGVRGNGDVRPVFARCGLISQAKGSAYL
EAGNTKIICSVYGPRETERKDETDMKTGRLVCDFRLAPFSCLKRGAWIQGSEERDLSQTL
LESLQPGVCLHRYPRSQIEVNVMVLENDGSILAHAVTCASMALADAGIEMYDVVLGCALR
QNGNACLVDPSYSEECGSWREGYGENQGCVTVALLPNLNQVSGLNADGEMREDILADAMR
TCMDGCHRLYPAVQQALTRAVKKKAPPPEK
NT seq 813 nt   +upstreamnt  +downstreamnt
atgcctgttgacacaaaacgtattcgtggaccggaggagtcgcaatccccgctgcttttt
ctttctccagacaaagctcccaaggccagcatcaggcaaggcgtccgggggaatggagac
gtgcggccagtgtttgcgcgctgcgggctgatcagccaggcaaaaggttcggcgtacctc
gaggctggaaacaccaagataatatgctcggtgtatggacccagagaaactgaacgcaag
gacgaaacagacatgaaaaccggtcgccttgtttgcgacttcagactcgcgccgttttca
tgtttgaaacggggtgcctggatccaaggcagcgaggaaagagacctgtcccagactcta
ctggagagcttgcagccaggagtttgcctacacagatacccgcgctctcagattgaggtg
aatgtcatggttctggagaatgacggctcgattcttgcacatgcggtgacatgcgcctct
atggccctggcggatgccggtatcgaaatgtatgatgtggtgctgggttgtgcactgagg
cagaatggaaacgcgtgtctcgttgacccatcatactcggaggagtgtgggagctggcgg
gagggttacggggagaaccaggggtgtgtcaccgtcgctctgcttcccaatctgaatcaa
gtgtctggactgaatgcggacggagagatgcgggaagacatcctggccgatgctatgaga
acctgcatggacggctgtcacagactttatccggcggtccagcaagctctgacacgggct
gtgaagaaaaaagctcctccacccgagaaatag

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