Labeo rohita (rohu): 127168843
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Entry
127168843 CDS
T09007
Symbol
gigyf1a
Name
(RefSeq) LOW QUALITY PROTEIN: GRB10-interacting GYF protein 1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127168843 (gigyf1a)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127168843 (gigyf1a)
Surveillance factors
Other surveillance factors
127168843 (gigyf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
127168843
NCBI-ProteinID:
XP_050971890
LinkDB
All DBs
Position
7:complement(38596160..38631195)
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AA seq
1025 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVSSPPASPAMPKYKLAEYRYGREEMLALYVKDNKVPEEM
QDKEFAAILQDEPQQPLALLPLTEEEQRNFSMSVNSVAVLRLMGKGXGGAVPAGVNRGRG
SVRGSRGRGRGEGGFYQRSSEEGEGGFGRSVREIHRSQSWDDRNERRFEKPLRREGVRLG
FEEGGPGGRKEFMRSDSENWRILREDQEEEDTGEPGGSWRLTGSRRDDGGPRSAGWREHS
GPGEVRRRKFDFDFRDGGNEGGRRRAGSEGAEEERDGLPEWCTDEEDGEMGTFDSSGAFM
SIKKGPKDPIPEEEFEFQGLEDEEEDGANQEKKNGNDTEKSEKDVTDSAPMSETEVKPVS
PSPPPSLPPTLPTPVPEAVPSAAPSGLEEPQPAPSIPNKLPSEVLSEAMLDLSPSASSSL
PSSPPSSSSAATDLPLPGGDIEDDEGMKHLQQEAEKMVAALQDTSLEEECFTQTLQESRN
TASALPLSHDSAMKWFYKDPQGEIQGPFSTVEMCEWFQAGYFAMNLLVKRGCDEGFQPLG
EVIKMWGRVPFAPGPSPPPLLVRNQAQLRPHPPRGAIGNMDQERLKKQQELAAATALYQQ
LQQQQLFQLINRCGEQGMMPSLNRSMSVPDTGSMWDMHTSASQPAGGEASLWDLMNSSSQ
GPILEQLQKLHERREAELRAKREEEERKRRDEKRREEQKRREEEELYRRKQQQDLLMKLL
QQAPRQGSSGSGSSWSGGPIPGLGKQTKPLNLLDVQQETERMHKQQHRVQQQQRWGDASS
LWGAAGSLDGKVGGSGSPSGGGMGVWDEALKNQSALRNNIGLKNSRSSPSLSEQYMMRNR
KRTEEEERLLKLLQGMKSQDGFTTWCEQMLHALNTSANNSSSSQDVPTIVAYLKEVESPY
DVLNFICSYLGDTVEAKEFARQFLERRAKQKANHQRQQQQLSKEMAGLSMNNFPLQDTVR
GMNPSALQTMFQVHSGKGGVVYDQAAKLKKKQPMMLHSDPSILGYSFHGGPDRYGLNEME
MVEDY
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgaaacacttaactttggcccagaatggctccgtgcactttccagtggaggc
agtgtgtcttcccctcctgcctctcctgctatgccaaagtacaagttggccgagtaccgt
tacggccgagaggagatgctagcactttatgtcaaagacaacaaggtccctgaagaaatg
caggataaggagtttgctgctattctgcaggatgagcctcaacagccactggcactgttg
cctctcactgaggaagagcagaggaacttctcaatgtctgtcaacagtgtggctgtgctg
aggcttatgggtaaggggnngggcggggccgtcccggctggggtgaaccgaggtagaggc
agcgtgagaggcagtcgaggtcgaggacgaggagagggcggattctaccaaagaagcagt
gaagaaggagagggcggttttggtcgtagcgttcgagagatccatcgcagccagagctgg
gatgacagaaacgaaagacgttttgagaaacctctgaggagggaaggtgtgcgcctgggt
tttgaggaggggggtccaggtggcagaaaggagttcatgcgctctgatagtgaaaactgg
cgcatacttagagaggatcaggaagaagaggacacaggagagcctggtggcagctggaga
ctcaccggctcacgaagagatgatggtggtcctcgctcggccggttggcgggaacactct
ggtccgggagaagttcgccgcaggaagtttgacttcgacttccgggatggagggaacgag
ggaggcagaaggagagcaggcagtgaaggagcagaggaggagagagatggtctgccagag
tggtgtacagatgaggaagatggagaaatgggaacctttgattcttctggagcgtttatg
tctatcaagaagggcccgaaagatcctattccagaagaggagtttgagttccaggggttg
gaggatgaggaagaggacggtgctaatcaagagaagaagaacggaaatgatactgaaaaa
agcgagaaagatgtcactgactctgctccgatgtctgaaactgaagtgaaaccggtttct
ccttcccctcctccttctctccctccaactcttcctactcctgtccctgaggctgtgccc
tctgctgccccctctggcctggaggagcctcagcctgccccctccattcccaacaaacta
ccaagtgaagtgttatcagaggccatgttagatttgagccccagtgcctcctccagtctg
ccttcatcgcctccctcttcgtcctctgctgctactgacctcccactaccggggggtgat
attgaggatgatgagggcatgaagcacctgcaacaggaggcagagaagatggtggcagcg
ctccaagacacatctctagaggaagagtgcttcacccagactcttcaggagagcagaaac
acagcctctgctcttcctctctcccatgactcggccatgaaatggttttacaaagacccg
caaggagagattcagggtcctttcagtacagtggagatgtgtgagtggtttcaggcgggg
tatttcgccatgaacctgcttgttaaacgtggttgtgatgagggatttcagccgctgggg
gaagtcattaagatgtgggggcgtgtgcctttcgcccctggcccctcccctccgcccctc
ttggtgaggaatcaagcccagcttcgccctcacccaccccggggggcaatcggaaatatg
gatcaggagcggctgaagaagcagcaggaattagctgctgccacggctctttaccagcaa
ctccagcaacagcagctgttccagctcatcaacaggtgtggagagcagggtatgatgcct
tcgttaaacaggtcgatgtcagtgccagatacagggtccatgtgggacatgcatacctca
gcctcacagccagcaggcggtgaggccagtctatgggacttaatgaattcttcatctcag
ggtccaattctagaacagcttcagaagctacatgagagaagagaagctgaactcagggcc
aagcgtgaggaagaggaaagaaaacggagagatgaaaaaaggcgagaagagcagaaaagg
agagaggaggaggagctttacaggcgcaaacagcagcaggatttgctgatgaagttgctc
cagcaggctccacgtcagggttcctcaggctccgggtcgagctggagcggaggacccatc
cctggtctgggaaagcagaccaagcctctcaacctcctggacgtccagcaggagaccgaa
agaatgcacaaacaacagcacagagtccagcagcagcagaggtggggtgatgcctcttcg
ttgtggggagctgctggatctttggatggaaaggtgggtggcagcggcagcccctctgga
ggaggcatgggagtctgggacgaggccctcaagaaccagagcgcacttcgcaacaacata
gggctgaagaacagccggagcagtccctcgctgagtgagcagtatatgatgagaaaccgc
aaacgcactgaggaggaggagcggctgttgaaactcctgcaggggatgaagtctcaggac
ggcttcaccacctggtgtgaacagatgctgcatgcgctcaacacctccgccaataactcc
tcctcttcccaggatgtgcctaccattgtggcgtacctgaaggaggtggagtccccgtat
gatgtgttgaactttatctgctcctacctgggcgacactgtcgaagccaaagagttcgcc
agacagttcctggagcgccgtgccaaacagaaagctaaccaccagagacagcagcagcag
ctctccaaagagatggctggacttagcatgaacaacttccctctgcaggatactgtacga
ggaatgaaccccagtgccctgcagacgatgttccaggtgcattctgggaaggggggtgtg
gtctatgatcaggcagcaaagctgaagaagaaacagcccatgatgctgcactctgaccca
agcatcttagggtactcattccatggtggccctgatcggtatggtctaaacgagatggag
atggtcgaggattactga
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integrated database retrieval system
