Labeo rohita (rohu): 127168942
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Entry
127168942 CDS
T09007
Symbol
sox19b
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127168942 (sox19b)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127168942 (sox19b)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
127168942
NCBI-ProteinID:
XP_050972065
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Position
7:34654144..34656122
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AA seq
293 aa
AA seq
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MMYSMMEHELKTAGPPHPHQTGPGMSPPVSGVGNAHHGSKTSCPPGGDPMDKVKRPMNAF
MVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDTEKRPFIDEAKRLRAVHMKEYPDY
KYKPRRKTKALMKKDNPVGKYPLAAGNLLASAVAQGQGGSPRMDGYGWGHTGGYMGMQGE
ALGYPQQLHRYELSALQYPSAQSYMNGASAYSQMSYSGSPQQPSPVMSMVKPEPLSHSPT
GVPNHHRGAFQGDLRDMISMYIPGGDASDSSNQRGYPGVQQHYLGGTVPLTHI
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacagcatgatggagcatgaactgaagaccgcgggtccacctcatccccaccag
accggtccggggatgtctcctccggttagcggggttggaaatgcgcaccacggttcaaaa
acttcttgtccacccggcggggaccccatggacaaagtgaagcgccccatgaatgcgttt
atggtctggtcccggggtcagcggaggaagatggcacaggagaatcccaaaatgcacaac
tcggagataagcaaacgcctcggggcggaatggaaacttttaacggacaccgagaagcgg
ccgttcatcgatgaggccaaacggctgcgggccgtacacatgaaggagtaccccgactac
aaatacaaaccaagacgcaaaaccaaagcccttatgaagaaggacaaccccgtcggtaaa
taccctctcgcagccggcaacctcttggcgtccgccgtggcacagggacaaggtgggagc
ccgagaatggacggctatggctggggtcacaccggtggttatatgggcatgcagggtgaa
gcacttggatacccgcaacaactgcaccggtacgaactgtcagctctccagtatccgtcg
gcacagtcgtacatgaacggcgccagcgcttacagccagatgtcatatagtggcagccct
cagcagcccagtccagtgatgtctatggttaaaccagaacccctatcccactcacctact
ggagtaccaaaccaccaccgtggcgctttccaaggggacctgagggacatgattagcatg
tacattccaggtggtgatgccagcgatagctcaaaccagaggggttaccctggtgtccaa
cagcactatcttggtggaactgttccccttactcatatctga
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