Labeo rohita (rohu): 127168966
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Entry
127168966 CDS
T09007
Symbol
nfatc3a
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 3 isoform X1
KO
K17333
nuclear factor of activated T-cells, cytoplasmic 3
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04010
MAPK signaling pathway
lroh04020
Calcium signaling pathway
lroh04148
Efferocytosis
lroh04218
Cellular senescence
lroh04310
Wnt signaling pathway
lroh04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127168966 (nfatc3a)
04310 Wnt signaling pathway
127168966 (nfatc3a)
04020 Calcium signaling pathway
127168966 (nfatc3a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127168966 (nfatc3a)
09143 Cell growth and death
04218 Cellular senescence
127168966 (nfatc3a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
127168966 (nfatc3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127168966 (nfatc3a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
127168966 (nfatc3a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
127168966
NCBI-ProteinID:
XP_050972103
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All DBs
Position
7:28404174..28480788
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AA seq
1074 aa
AA seq
DB search
MTTANCPGNEELDFRLIFGEDGQQPQLGPADLETDENTSFYILNVGQPPSVVHQSHSHQR
HGGPPPAQLIATSPSLQAHHKAYEPSYEHQDSKYTPTGVGGGGNGPPKAFECPSIQITSI
SPSCQQEMETNEDEMRAKGPDGDYHDRPLSRDHLYLPLDHSYRDSSLSPSPCSSLSSRSW
FSDASSCESISHVYDDVDSELNEAAARFTLGSPLTSPGCSPQAGPQEEVWQQQHHQHHPA
FTHSLSHSHGHSLSPRQSPCHSPRTSVTDENWLSPRSPSRPSSRPTSPCGKRRHSSADIC
YLGSLSPHHSPTATPGPSPRGSVTEDTWIGSPSMGMSPFQCCPSEADIPSKTRKTSQDCT
TAIQSGKGDLGMDDSGNVSPLLDSTADEAMHGLKKDGSGEQFLSVPSHFTWNKPKPGHTP
IFRASSLPPLDWPLPNQYGQYELKIEVHPKAHHRAHYETEGSRGAIKAASGGHPIVKLVG
YNEKPVNLQMFIGTADDRYLRPHAFYQVHRITGKTVATASQEIIIASTKVLEIPLLPENN
MSASIDCAGILKLRNSDIELRKGETDIGRKNTRVRVVFRVHIPQPSGKVVSLQAASIPVE
CSQRSAQELPQVEKASISSCPVSGGEEMVITGSNFFPESKVIFLEKGPDGRPQWEVEGKI
IREKSQGSSIVVEVPPYHSKTVTSAVQVQFYVCNGKRKRSQSQRFTYLPVRVKQEHRDDL
DSPAVPPMSMPLVHAASLVCAQPLSSPEHSHPPDGLLSSSPRGLAAGLHPLQAPCAPIGS
PTLPHLPHLQAQGLNAPPECQMPFHPGPAATARPSYPPIQHNMPFNGQHSLPMTAGSPQA
YERMPFQADPAGCHTLGLGMVYGPASSTPTSGVPPGPGSSPSHAACTGSNQVMAHSAPHL
HSLGYHCPTPGQVPSPTHTLGQPPPQLQRPLVYHPAGQRSASCPTPSSAPAHMVPSPHSG
PSSPQLHSLPYHSPTSPSPTSNSPLGPMALSGQPSPQASSPVLAGLSPSGPLVHPLTQQG
ERLSIKQEPVDREPTFRTIGLQDITLDDVNEIIGRDMSQAPEAHGGSPAAHSQS
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgactactgcaaactgccccgggaatgaagagctggacttcagattgatcttcggggag
gacgggcagcagccgcagctaggccccgcagatctagaaacggatgaaaacacatcattt
tacatccttaatgtggggcagcctccttcagtggtgcaccaatcacacagtcaccagcgg
catggaggcccacccccagcccaactgattgccacctccccctccctgcaggcccaccac
aaggcctatgagcccagctatgagcaccaggactctaaatacacacccacaggtgtgggc
ggaggagggaacggcccaccaaaggcctttgaatgtcccagcatccagatcacctccatc
tccccgagctgccagcaggagatggagaccaacgaggatgagatgagagcgaagggtccg
gatggagactaccacgacagacctctgtctcgagaccatctgtacctgcctctagatcac
tcgtatcgagattcatccctgagcccgagtccctgtagcagcctttcctctcgtagttgg
ttctcagatgcgtcgtcctgcgaatccatctcgcatgtgtacgacgacgtggattcagag
ctaaatgaagcagcggcgcgtttcaccctgggctcgccgctcacctcgcccggctgctct
ccgcaggctggaccgcaggaggaagtgtggcaacagcagcatcatcagcatcacccggcc
ttcactcactccctttctcattcgcatggccattctctctcgccccgccagtcgccttgc
cactcgccccgtaccagcgtcacagacgagaactggctgagccctcgatcaccttcacga
ccctcatcacgtccgacatcgccgtgcgggaagagacgccactccagtgctgatatatgc
tacctgggctctttatcaccccatcactccccgactgccacgcccggcccctcgcccagg
ggcagcgtgaccgaagacacctggataggaagcccatcaatgggtatgtcccctttccag
tgttgtccctctgaggctgacataccctccaagacaaggaagacctcccaggactgtaca
acagcaattcagtcaggaaagggcgaccttggcatggatgactccgggaatgtatctcct
ttgcttgactcaactgctgatgaggccatgcacggattaaagaaggatggatctggagag
cagtttctttctgtcccatctcatttcacatggaacaaacccaaaccaggacacacgcct
attttcagggcatcatccctgcctcccctggactggccgttgccgaatcaatatgggcag
tatgaactgaagatcgaggttcatcccaaagctcatcacagagctcattacgagaccgaa
ggcagccgaggagccatcaaagctgcatctgggggacaccctatcgtcaagcttgttggc
tacaatgagaagccagtgaacctgcagatgttcatcgggacagcggatgaccgttatttg
aggccacatgcgttctaccaggttcaccgcataacaggaaaaactgttgctacggcaagc
caggaaattatcatcgccagcacgaaggttctcgagattcctctccttcctgaaaacaat
atgtctgccagtattgattgtgctggaatcctgaagttgaggaattctgacattgagctg
aggaaaggagagactgatattggacggaaaaacactcgggtccgtgtggtgttccgggtt
cacatcccacaacccagtggaaaagtggtctcactgcaggctgcttcaattccagtcgag
tgctcccagcgctcagcacaggagttacctcaggttgaaaaggccagtattagcagctgc
ccagtgagtggaggagaggaaatggtcatcactggctccaacttcttccctgagtcaaaa
gtcattttcctggagaaaggtcctgatggacgaccgcagtgggaggtggagggaaagatc
atcagagagaagagtcaaggatctagcatcgtggtggaggtgcctccttatcacagtaag
acagtcacttcagcagtgcaggtgcagttctacgtgtgcaatggcaaacggaaaagaagc
cagtcacagcgctttacttatctgccagtacgggtcaagcaggaacatagggatgatctg
gactcccctgccgtgccgcccatgtccatgcctctggtccatgctgccagtttggtctgt
gctcagccgctgtcctccccagagcactcccacccaccggacggccttctgtccagctct
ccacgtggcctggctgcaggcctgcaccctctccaggccccctgcgccccgataggctcc
ccaactcttccccacctgccccaccttcaggctcaagggctgaatgcacctcccgaatgc
cagatgcccttccacccaggccctgctgccactgccaggccgtcttacccacccatacag
cacaacatgcccttcaatggccagcacagtcttcctatgactgcgggctccccacaggca
tacgagcgaatgcccttccaggccgaccctgccgggtgtcacaccctgggtttggggatg
gtgtacggcccggcttcttcgacacccacctctggagtgcctccggggcctggctccagc
cccagccacgcagcctgcacaggtagcaaccaggtcatggcccactctgcacctcaccta
cactctctaggctatcactgccccactccagggcaggtcccgtcacccacccacacgctg
ggacagccacccccacagctccagcgtcccctggtttaccacccagccgggcagcggtcc
gcctcctgccctacaccctccagtgctcctgctcatatggtgccatctccccactccggg
ccttcatccccccaactccattccctaccctaccactcacccacctccccatcacctaca
tccaacagccccctggggcccatggcactctctggacagccttctccccaagctagcagc
cctgtcttggctgggttgtccccttcaggtcccttggtgcaccccctgacccaacaggga
gagaggctgagcatcaaacaggagccagtggatagagagcccacctttcgtaccattggc
ctgcaggatattacgcttgatgatgtgaacgagatcataggcagagacatgtctcaggcc
ccagaggctcatgggggctccccagctgcacacagtcaatcctag
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