Labeo rohita (rohu): 127168984
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Entry
127168984 CDS
T09007
Symbol
chrnb1
Name
(RefSeq) acetylcholine receptor subunit beta
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127168984 (chrnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127168984 (chrnb1)
Ion channels [BR:
lroh04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
127168984 (chrnb1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
PAC2
Motif
Other DBs
NCBI-GeneID:
127168984
NCBI-ProteinID:
XP_050972126
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Position
7:complement(37487933..37508361)
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AA seq
492 aa
AA seq
DB search
MKAQDWFIVTCCLYGLSAMTGASETEGQLMKKLFSSYNVKVRPARSPEERVVVRIGMTLS
SFVSLNMKDEEMNTIVIMNLEWNDYRLSWNPKDYGGIDVLRIPSGKVWLPDIVLINNNDG
VFGVALQVHVQAYSNGRVTWTPPALYKSSCGVKVTYFPFDWQNCTMVFHSYTYDASEVDL
QHGLDKRGNEIREIVYDTGFSESGEWHIRHKVSRKNVREDLYEDITFYLIIERKPMYYVF
NIILPCILITIIAIFNFYLPPDAGEKMGLSINVLLTLTVFLLLLANKVPETSLGVPIIVN
YLMFTMILVTFSVILSVVVLNLHHRSPNTHQMPLWVRKIFIHMLPPYLGMLRPKEETPVF
LEKPAKKENIQAISRVADEYFIRKPNNTNFLFPKPHRYQPDGPCTDLKKFIDGPSHYLTL
PPDLKAAVEAITYIAEQLQAEKDYEALKEDWQYVAMVVDRLFLWIFVIFTTLGTLGIFAD
ASFNATPTDPFP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcccaggactggtttatagtcacctgctgcctctatggcctgagcgcaatgaca
ggtgcatcagaaacagaaggtcagctgatgaagaagctgttttcttcatacaatgttaaa
gtgcgacctgcaaggagcccagaggaaagggttgtcgtgaggataggcatgaccctttca
tcattcgtcagcctgaacatgaaagatgaggagatgaacactattgttattatgaacttg
gagtggaacgattatcgcctctcctggaacccgaaagattatgggggaattgatgtgttg
cgtatcccgtctggaaaagtgtggcttcctgatattgttctcatcaataacaatgatggc
gtgtttggtgtagctctacaggtccacgtgcaggcctacagtaacggccgtgtgacgtgg
actccaccagctctttacaagagttcctgcggggtgaaggtgacatactttcctttcgac
tggcaaaattgcaccatggttttccactcgtatacgtatgatgcctcagaagtggatcta
cagcatggccttgataagagaggaaatgaaatccgagagatagtctatgacacaggcttt
agcgagagtggagagtggcacattcgtcataaggtttctaggaagaatgtgcgagaggat
ctgtatgaagacattaccttttacctgatcatcgagagaaagcccatgtattatgtattt
aacatcatcctgccctgtatcctcatcaccatcattgccatctttaacttctacttgcca
cctgatgcaggggagaaaatgggcctttccatcaatgtactgctgactttaactgtcttc
ctgcttctgctggccaacaaagtccctgaaacatctctgggcgttcccattatcgtcaac
taccttatgttcaccatgatcctggtcaccttttctgtcatcctcagtgttgtggtgctc
aaccttcaccatcgctcccccaacacacaccaaatgcctctctgggtgcgcaagattttt
atccacatgttgcctccatacctggggatgctgcgacctaaagaggagacccctgtgttt
ctggagaaacctgccaaaaaggaaaacatccaagccatcagcagagtggccgatgagtac
ttcatccgcaagcccaataacaccaatttcctcttccccaaaccccacaggtaccagcct
gatggtccatgcactgacctaaagaagttcattgatggccccagtcattacctcaccctt
cctccagatctcaaggcagctgtggaggccatcacttacatcgcagagcagctgcaggca
gagaaagattacgaggctttaaaggaggactggcagtatgttgcaatggtggttgatcga
ctcttcctctggatctttgtgatttttactacccttgggacactgggcatttttgctgat
gccagcttcaatgccacacccactgacccctttccttaa
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