Labeo rohita (rohu): 127169002
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Entry
127169002 CDS
T09007
Symbol
itga11a
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-11a
KO
K06587
integrin alpha 11
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
lroh04810
Regulation of actin cytoskeleton
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127169002 (itga11a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127169002 (itga11a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
127169002 (itga11a)
04810 Regulation of actin cytoskeleton
127169002 (itga11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127169002 (itga11a)
Cell adhesion molecules [BR:
lroh04515
]
Integrins
Integrin alpha subunits
127169002 (itga11a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
FG-GAP_3
FG-GAP_2
Integrin_A_Ig_3
Motif
Other DBs
NCBI-GeneID:
127169002
NCBI-ProteinID:
XP_050972154
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Position
7:29621078..29668114
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AA seq
1190 aa
AA seq
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MEYYWIHLLWILWSVMPGFHDCFNIDTKNHRIIKGPRQTQFGYTVQQHMAGGQKWLLVGA
PLETNGQHQTGDVYKCSLSRRSGGPSCTKLNLGRISLTNVSERKDKMRLGMTLSSNPKDN
SFVACGPLWSYECGSSYYSTGICSRVNASFKFSRTIAPAFQRCETYMDIVIVLDGSNSIY
PWNEVQDFLINILRKFYVGPGQIQVGVLQYGEKVVSEFQLNDFRSVEEVVQAARKIGQRG
GEETNTALGISVARSEAFKQGGRRGAKKVMIVITDGESHDSADLQQVIEDSEKDGITRYA
IAVLGYYNRRGINPEAFLNEIKYIASDPDDKHFFNVTDEAALNDIVDALGERIFSLEGTS
KNGTAFGLQMSQAGFSTHIVEDGVLVGAVGAYDWNGAVLKETRQGKVVPPKSSYEQEFPE
ELKNHGAYLGYTVTSVVSARSGQLFVAGAPRFNHTGKVIIFTLKNTGELTILHSLKGQQI
GSYYGSEIAPVDLDDDGVTDNLLVAAPMFFSGGWEKGKVYIYRVTEQPRFILEGSLEILD
QGQNARFGSALAPVPDLNGDSFNDVVIGAPLEDDHKGAIYIYHSQRNRILRKYKQRIGAV
QLAPGLQYFGRSIHGKMDMNGDDLVDLAVGSLGAAVLLWSRSVVRIHATVRFEPSKINIF
NKDCRRGGKDVTCMSAIVCLNITSRTPIRPAEEIALSYNAFFEEKRFNPRAVFDDPDRQQ
PQNLTLHPGEETCQHIYFHVMETTDYARPIIFTVETELLDLDQGPVLDDSWPTTVKTQLP
FWNGCDEDDHCVPDLVLQSQTDLMNRKQFCAQAFRSASLLCRNQTPEEPSERIIEGSRRR
MVVDVRLENRGENAYGAQLNITNTPNLRFSSLVVKDNSDIHIDCRSETRRKYEKSCNISA
PFMRAKSQVTFRLEFEFSHSVLLDHVRIILEVTSEGEEVVLHDNINDIFYTLKYEADLLF
TRDFYPTRYDLKYDLSLEEPGSFNPPFNFTFQVQNLGYFPVQDLQLYIAIPELTKNGNQL
LQIRDFHIDQVGGSHCIPPQHVAHSRASPEDLSRTSRLNYSNTLTVPVQCTVNLPSYRDV
SVKIGGSLRTDALHALKFKTLELVTTASVELNPSSPMFLPEERPVRHIILEIRKEEDYRV
PIWIIIGSTLGGLLLLSLLILALWKLGFFQRQKRREETENEANGKMMEER
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggagtactactggatccacctactctggattctctggagcgtgatgccagggttccat
gactgtttcaacattgacaccaaaaatcaccggatcataaagggccccaggcagacacag
tttggctacactgtccaacaacacatggctgggggacagaagtggttactggtaggagcc
cctctggaaacaaatggacagcatcagacaggagacgtgtacaaatgttccttaagtaga
agatctggaggacccagctgcaccaaactcaatcttggaaggatatcgttgacaaatgtc
tctgaacgaaaggataagatgagacttggaatgaccctttcatccaaccctaaagacaac
agctttgtggcctgcggtcccctttggtcgtacgaatgtggcagctcatactacagcact
ggaatttgctccagagtaaacgccagctttaaattttcccgtactatcgctcctgccttc
caaaggtgtgagacatacatggacatagtgatagtcctggacggatcaaattcaatctat
ccctggaatgaagttcaagacttcctaatcaacatcctgcggaaattctatgttggacca
ggacagattcaggttggagtactgcagtatggagaaaaggtggtgtccgagtttcagctg
aatgacttccgctctgtggaggaagtggtccaagcagcccgtaagataggccagcgagga
ggagaagagaccaacactgcgctgggaatcagtgttgcacgctcagaggcctttaaacag
ggaggtagaagaggagcaaagaaggtcatgatcgtcatcacagatggagaatcacatgac
agtgctgacctgcagcaggtcattgaggacagcgagaaggacggcatcacccgatatgcc
attgctgtactgggctactataaccgcagaggcatcaacccagaagctttcctcaatgag
atcaagtacatcgctagcgaccccgatgataagcatttctttaacgtgacagacgaagca
gctctgaatgacattgtggacgctctcggagagaggatcttcagtttagaggggactagc
aagaatgggacagcatttggtctccagatgtctcaagctggcttctccacacacatagtg
gaggacggtgttttagtgggagcagtgggagcttatgactggaatggggcggtactgaag
gagactcgtcagggtaaagtggtcccaccaaagtcttcttatgaacaagagttcccagaa
gaactgaagaaccatggagcatacctgggttacaccgtgacctcagtggtttcagctcgc
agtggccagttatttgtagcgggagctcctcggtttaaccacacgggcaaggtcatcatc
ttcaccctgaaaaatactggggagctcactatattacactcactcaaaggacagcagatc
gggtcatactatggcagtgagattgctccagtcgatctggatgatgatggagtgactgat
aacctgctggtggctgcgcctatgttcttcagtggaggctgggaaaagggcaaagtctac
atttacagagtcacagagcagcctcgttttatactggagggctcgctggagatcttagat
caaggtcagaatgcccgtttcggctctgcgctggccccagtgcctgatcttaacggggat
tcatttaatgatgtggtaataggagctccgttagaggatgaccacaaaggagccatttac
atctaccacagtcaacgcaacagaatactgagaaaatataaacagaggatcggtgctgtt
cagcttgccccgggtctgcagtattttggtcgtagtatccatggaaagatggatatgaat
ggagatgacctggtggatctagctgtgggctcccttggtgctgcggtacttctttggtct
cgaagtgttgtccgaatccatgccactgttcgatttgagcccagcaagatcaatatattc
aataaagactgccggagaggagggaaagatgtgacctgcatgtcagctattgtatgcctg
aatatcacatctcggactcctatcagacctgcagaggaaatagctcttagctacaatgct
ttctttgaggagaagcgcttcaaccctcgagctgtgtttgatgacccagatcgccagcag
ccacagaatcttacactgcatcctggagaggagacgtgccaacacatctacttccatgtt
atggagactacagactatgccagacccattatattcactgtagagactgagctattggat
ctggatcaaggcccagtgctggatgatagctggccgactactgtaaaaacacagcttccc
ttctggaacgggtgtgacgaagacgaccactgtgttccagacttggtgttacaatctcag
actgatctaatgaatcgcaagcagttctgtgcccaggcgtttcgatcagccagtctatta
tgtcggaatcagacgccagaagaaccttctgaacgcattatagagggatccaggaggagg
atggtagtagatgtacgtctggaaaacagaggggagaacgcatatggggctcagcttaac
atcactaacactccaaacctacgcttctccagccttgtagtgaaggataactctgatata
catatagactgccgcagtgagaccaggcgaaaatatgaaaaatcttgcaatatcagtgca
ccctttatgagagcaaaatcacaggtaacatttcgtttggaatttgaattcagtcactct
gtgctgctggatcacgtccggatcatattggaggttaccagtgagggtgaggaggttgtc
ctacatgataacattaatgacattttctacactctgaaatacgaggctgatctgctcttc
acaagggatttttaccctacccgatatgatcttaaatatgacctatctctagaggaaccg
ggtagtttcaaccctccgttcaacttcacctttcaggtccagaaccttggttattttcca
gtccaagatttgcagctgtacattgcaatccctgagctcactaaaaatggcaatcaactc
ctgcagatcagagattttcatattgaccaggtaggtggaagtcattgtatcccccctcag
catgtggcacacagtcgagcatctccggaggacctctcacgcacatcacgactgaactat
tccaacaccctaacagtgccagtgcagtgtactgtcaacctgccttcctacagagacgtc
agcgtgaaaattggcggatccctccgtactgatgcactgcatgcactgaagttcaaaacc
ctcgagctggtgacgacagcctcagtggagctgaacccttccagccctatgtttctgcct
gaagagaggccggtcagacatataatcctagagatcaggaaggaggaggattaccgtgtt
cccatctggattatcataggcagcacacttggaggcctgttacttctttcgctcctcatt
ctggcactttggaagttgggttttttccaaaggcagaaaaggcgagaggagactgagaat
gaggctaatggcaagatgatggaagaacgataa
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integrated database retrieval system
