Labeo rohita (rohu): 127169124
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Entry
127169124 CDS
T09007
Symbol
trim36
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM36 isoform X1
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127169124 (trim36)
04121 Ubiquitin system [BR:
lroh04121
]
127169124 (trim36)
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127169124 (trim36)
Membrane trafficking [BR:
lroh04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
127169124 (trim36)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127169124 (trim36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
zf-B_box
zf-RING_UBOX
SPRY
ANCHR-like_BBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_5
zf-RING_2
Apyrase
Pur_ac_phosph_N
U-box
Transposase_24
zf-CRD
Motif
Other DBs
NCBI-GeneID:
127169124
NCBI-ProteinID:
XP_050972229
LinkDB
All DBs
Position
8:complement(30472302..30494645)
Genome browser
AA seq
749 aa
AA seq
DB search
MSDSEMSEFASIVERIERGEVPMKNIERELICPICKELFTHPLILPCQHSVCHKCVKELL
LPNHDDSISTDAGSESSNPGSPRSRVPSPSMEKLDRLVRSASLRRSFGGRGSISSPGWRR
SSVTPRVTTFPCPGCQHDIDLGERGISMLFRNFTLESIVERYRQAARAAVAIMCNACKPP
VQEATKSCMDCKASFCNECFKMNHPWGTPKAQHEYVGPTTNFRPKVLMCPEHEMEKVNMY
CEVCRRPVCHLCKLGGSHANHKVTSMSSAYKILKEKLSKSIHYLISKEDQVRTQISELEV
LIRHTEENGQLAERRANEHFERLFETLQERKTEMLRSIEQCRNLRVERLRTQVEEYQGML
ENSGLVGYAQEVLKETDQSCFVQTAKLLHVRIQKATDSLKTFQPAATPSFEEFVLDTSKE
EVLLKELSFSGVPDPPVIDLSCCRVYNEGLIHWRLSEDSLPTDHHIVEFRKLGAEDEEEE
ESRWSASERVYGCSTVLSDLVGDSRYAFRVKSCRNGVFSPCSPEVTFHTPPAPVFGFLFN
EKCGFSAERLQLSKRRDSVESVAGMSFLLAAERVQTGSYICLDYIIGDTGISHGRHYWAF
RVEPNSYMVKVGVASDSKLTEWFHNPRDTSSPRYDHDSGHDSGSEDACFEVSQPFTLVTI
GMGRLFIPKASVGAASGDHSSRILPMPQRIGVCLDYDAGRVFFYDADTMRCLYERQVDCS
GTMYPAFGLLGGGAVHLEEFITAKRLSYM
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcggagatgtcagagttcgcgagcatcgtggagcgcattgagagaggcgag
gtgccgatgaagaacatcgagcgggagctgatctgtcccatctgtaaggagctcttcacg
catccgctcatcctgccctgccagcacagcgtctgccacaaatgcgtcaaagagctgctc
ttgcctaaccatgacgactcgatcagcacagacgcgggatccgagagctcgaacccgggc
agccctcgatccagagtgccgtctcctagcatggagaagctggaccgcctggtgcgatca
gcctcgctgaggaggtcgtttggagggagagggtccatatcttctcccggatggaggcgt
tcctccgtcactccccgcgtcaccaccttcccatgtccaggctgtcagcatgatattgat
cttggggagcgagggatcagcatgctcttccgaaacttcacgctggagagcatcgttgaa
cgctaccgtcaagcggcccgcgcggccgtggccatcatgtgcaacgcatgcaaaccgccc
gttcaggaggccaccaagagctgcatggactgcaaggccagcttctgcaacgagtgcttc
aaaatgaaccacccgtggggaacgcccaaagcccagcatgagtacgtgggacccaccacc
aacttcagaccaaaggtgctaatgtgtcctgaacacgagatggagaaggtcaacatgtac
tgtgaggtgtgtcggcgtcccgtgtgtcatctctgcaagcttggcggttctcacgctaat
cacaaagtcacttccatgagcagcgcctacaagatcctcaaggagaagctctcgaagagt
atccattacctaattagcaaagaagaccaagtgaggactcagatttctgagctggaggtg
ttgatccgtcacacagaggagaacgggcagctcgctgagagacgcgccaacgaacacttt
gagcgtctgttcgagacccttcaggagaggaagacggagatgctgcggtccatcgagcag
tgcaggaacctgcgtgtggagcgtctgcggactcaggtggaggagtatcagggcatgctg
gagaacagtggcctggtgggatacgcacaggaagtgctgaaggagaccgatcagtcctgc
ttcgtccagacagccaaacttctgcatgtcaggattcagaaagccaccgattcgctgaag
accttccagccagcagcgacgccgtcgtttgaggagtttgtgttggacacttcgaaggag
gaggtcttgctgaaggagctgagctttagcggtgttcctgaccctccagtgatcgatctc
tcttgctgccgcgtttacaacgagggtctgatccactggcgtctgtctgaagactctctg
cccaccgatcatcatattgtggagttcaggaagctgggggccgaggatgaggaggaagag
gaatcccgctggagtgcgagcgaacgtgtttacggctgcagcacagtgctgtctgatctg
gtcggagactctcgctacgccttcagagtgaagagctgccgtaacggcgtctttagcccc
tgcagtcctgaggtgactttccacacgcctccagctccagtgtttggcttcctgtttaac
gagaagtgcggattcagtgcggagcggctgcagctgagcaaacgcagggactccgtggag
agcgttgcgggaatgagtttccttttggccgccgagcgcgtccagacgggaagttacatt
tgtctcgactacatcatcggtgatacgggcatctctcacggtcgccattactgggctttc
cgtgtggagcccaattcatatatggttaaagtgggagtggcttctgactccaaactaacg
gagtggtttcacaacccacgtgacaccagcagtccacggtatgaccacgacagcgggcat
gacagtggcagcgaagatgcctgtttcgaggtatcgcagcccttcacgctggtcaccatc
ggcatggggcggcttttcatccccaaagcgtccgtcggtgctgcctccggggatcacagc
agccgcatcctgcccatgccgcagagaatcggagtctgcctggactacgacgcgggacgg
gtgtttttctacgacgccgacaccatgcgctgcctctatgaaagacaggtggactgttcg
ggtaccatgtaccctgcgttcggcctcttgggcggtggggcggttcatctggaggagttt
atcacggccaagcggctgtcatacatgtga
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