Labeo rohita (rohu): 127169194
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Entry
127169194 CDS
T09007
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127169194 (apex2)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
127169194 (apex2)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
127169194 (apex2)
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Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
127169194
NCBI-ProteinID:
XP_050972342
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Position
8:21456740..21461676
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AA seq
560 aa
AA seq
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MKVVTWNINGIRTFKNGIKKTLDSFNADIICVQETKVTRDLLDEKTAIVDGYNSYFSFSR
GRSGYSGVATYCKDTATPFLAEEGLTGLLANQGEAVGCYGDQVELSSDELLALDSEGRAV
ITQHHFVGTDGPQKLTVINVYCPRADPEKPERKQYKLQFYQLLQCRAEALLSSGSRVIVL
GDVNTSHRPIDHCDPDDVDNFEDNPGRKWLDHFLFGKAEKAQNGNTEDELEEISPKSASG
GKFVDSFRRFHPKRSNAFTCWSTLTGARQTNYGTRIDYIFADHCLVESAFTGVDIMPEVE
GSDHCPVWAQLSCTLQSSPKCPPMCTRHMPEFTGRQQKLSRFFVKVSDKERFSEESLPGS
QDSGEIRENLNPVPQGNSVAKKRPTCKEKDTNAQKAKRSKQMKTESNVKGGLLAFFKPKQ
TPSISSSGNLSPKQTESSQDSLRSESDTRSCPGDVQTETSLSMVTETETENQDEVEGEST
SVEKSKDCKKGPCAGFWKAVLHGPPQPPLCKSHNEPCVLRTVKKAGPNLGKQFFVCARPQ
GHASNPQARCNFFAWVDKGK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttgtaacttggaacataaacggaatacgaacgtttaaaaatggcatcaagaaa
actctggattcattcaatgccgatataatctgcgttcaagagactaaagttacccgtgac
ctgttggatgaaaagacagcaattgtcgatggctacaattcatactttagttttagccga
ggacgaagtggatactcaggcgttgccacctactgtaaggataccgctactccattcctg
gccgaggaaggattgacaggtctgctggccaatcagggagaggctgttggttgctatggt
gaccaggttgagttgtccagtgatgagcttcttgcgctagacagtgaaggaagggctgtc
atcactcagcatcacttcgttggcacagatggaccacagaagctgacggttatcaatgtt
tattgtccccgagctgacccagagaaacctgagagaaaacagtacaagctccagttttac
cagctccttcaatgcagagctgaagctctcttgagttcagggagtcgcgtgattgtattg
ggagatgtaaacacttctcatcgacccatagaccactgtgatccagatgatgtggataac
tttgaagataatcctgggaggaagtggctggatcatttcctttttggaaaagcagaaaaa
gctcaaaatggaaatactgaagatgaacttgaagaaatctccccgaaatctgcctctggt
gggaagtttgtcgactccttccgccgtttccacccgaagcgctccaacgccttcacatgc
tggtccacacttacgggtgccaggcagaccaactatggcacacgtatcgactacatcttc
gccgaccactgtctggtggaatcagcctttactggcgtggacattatgccggaggtggag
ggatccgatcactgtcccgtatgggcgcagctcagctgtaccctccagtcgagtcccaag
tgcccacctatgtgtacacgtcacatgccagagttcactggcagacagcagaaactttca
cgcttttttgtcaaagtttcagacaaagagaggttctctgaagagagtctacctggatca
caagattcaggggaaattcgggaaaacctgaatcctgtaccacaggggaacagtgttgca
aagaagagaccgacatgtaaagaaaaagacacaaatgcacaaaaagccaaaagaagcaag
cagatgaaaacggaaagcaatgttaaaggaggtcttttagctttctttaagcctaaacaa
acaccatcgatctcttcaagtggaaacctgagcccgaaacagacagaatcgtctcaggat
agtctacgtagtgagagcgacacaagaagctgccctggcgatgtgcaaacggagaccagt
ctttccatggtgacagagacggagactgaaaatcaggatgaagtggaaggagaatcgaca
tccgtagagaagtcaaaggactgtaagaaggggccatgcgctggtttttggaaagcggtt
ttgcatgggcctcctcaaccaccactgtgtaaatcacataatgagccctgtgtcttacgc
actgtgaaaaaagcaggacctaatttaggcaaacagttttttgtatgtgcccgtcctcaa
ggccatgcctccaatcctcaagccaggtgtaatttttttgcctgggtagataaaggaaag
taa
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