Labeo rohita (rohu): 127169215
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Entry
127169215 CDS
T09007
Symbol
ybx1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127169215 (ybx1)
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127169215 (ybx1)
03041 Spliceosome [BR:
lroh03041
]
127169215 (ybx1)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
127169215 (ybx1)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
127169215 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
127169215 (ybx1)
Spliceosome [BR:
lroh03041
]
Common components
Common spliceosomal components
General mRNP proteins
127169215 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
127169215
NCBI-ProteinID:
XP_050972385
LinkDB
All DBs
Position
8:complement(2731294..2737314)
Genome browser
AA seq
313 aa
AA seq
DB search
MSSEAETQQPPQPAADAESPSSPAAAATAGDKKVIATKVLGTVKWFNVRNGYGFINRNDT
KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA
DRNRYRRYPRRRGPPRDYQENYQSDGETREKREEGENAPEGEMQQQQRRPTYPGRRRYPP
YFVRRRYGRRPPYTNTPQRGDMTEGGEGDENQGGPDQGNKPMRQNYYRGFRPRFRPSRGP
PRPRPVREGEEDKENQGEGGQNQEPRQRRYRRNFNYRRRRPQTTKPQDGKDSKAADASAD
KSAAPEAEQGGAD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacacagcagccgccgcagcctgccgccgacgcggagagccca
tccagcccggcagccgcagctaccgcgggggataagaaggtcatcgcaacaaaagtcctg
gggacagtaaaatggttcaatgtaaggaacggctacggtttcatcaacaggaatgacaca
aaggaagatgtctttgtgcaccagaccgccattaagaagaacaacccaaggaaatatctt
cgtagcgttggggatggagagactgtggagtttgatgtcgtagaaggggagaagggtgcc
gaggcagccaacgttaccggcccaggtggcgttcctgtgcagggtagcaagtatgcggct
gacaggaaccgatacaggcggtacccacgcaggaggggcccccctcgcgactaccaggag
aactatcagagtgacggagagacacgggagaagagagaagagggagaaaacgcccctgag
ggtgagatgcagcaacagcagcgtagacccacctatcccggcagacggcgctacccacca
tactttgtgcgaaggcgttacggcagacgccccccatacaccaacacaccccagagagga
gacatgacagagggtggggaaggtgatgagaaccaaggtggtccagaccagggcaacaaa
ccaatgaggcagaactactacagaggcttccgaccaaggttcagaccaagcaggggtccc
ccacgtccccggccggtgcgagaaggtgaggaggataaggagaaccagggcgagggcggg
caaaaccaggagccccgtcagcgtcgctatcgtcgcaacttcaactaccgccgcagacgg
ccccagacaaccaagcctcaggatggcaaggacagcaaggcagccgacgcatcagccgac
aaatcagccgctcccgaagccgaacagggcggagcagattaa
DBGET
integrated database retrieval system
