Labeo rohita (rohu): 127169227
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Entry
127169227 CDS
T09007
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 5
KO
K08620
a disintegrin and metalloproteinase with thrombospondin motifs 5 [EC:3.4.24.-]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127169227
Peptidases and inhibitors [BR:
lroh01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
127169227
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ADAMTS_spacer1
ADAMTS_CR_2
Reprolysin
Reprolysin_5
TSP1_ADAMTS
Reprolysin_3
TSP_1
ADAMTS_CR_3
TSP1_spondin
Reprolysin_2
Reprolysin_4
Peptidase_M10
Astacin
DUF4953
Motif
Other DBs
NCBI-GeneID:
127169227
NCBI-ProteinID:
XP_050972407
LinkDB
All DBs
Position
1:49592231..49620010
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AA seq
895 aa
AA seq
DB search
MWRIVLLCCALEGSVAFSAFRPPANASLLAPARGVVRTVDRIYHGGGKAGYLLYMDEQRF
QLDMERDESILSHHLGLNADASPPRRECVYRGTVNSNAESLAVFNLCGGGLDGFFALDHA
RYTITPLIRAKGHENDAHIVEDADATRALHYYTRDSFSFEAMQERHSCGTRDRKTRRDKK
RKRDEDARRWWTKFEKPDALTRRKRSVSRARHVELLLVADASMTKKYGKDLHHYLLTLAS
IASKLYGHASIENPIRLSVVKVAILSENEKGIEVTKNAAATLKSFCKWQNQQNPLDDDHQ
HHHDAAILFTRQDLCGHHSCDTLGMADVGTVCSPERSCAIIEDDGLHAAFTVAHEIGHLL
GLSHDDSKFCEERFGSTEDKRLMSSILTSIDASKPWSRCTSATITDFFDDGNAECLLDVP
HLPLLGPEELPGQKYDAVQQCRLAFGPEYTVCPGMDVCSRLWCAVIRKGQMVCLTKKLPA
VEGTPCGKGRICLQGKCVDKTRKRHYSTSNHGSWSSWGPWGSCSRTCGGGVQFAHRLCNN
PPPRNNGRYCTGKRAVYRSCNVTPCPSAGKSFRQEQCELRNGPQTDPKGVKTFVEWVPKF
AGVLPKDMCKLTCRAKGTGYYVVFSQRVVDGTECRPYSSSVCVKGKCVRTGCDGIIGSKL
QYDKCGICGGDGNSCIRVAGNFTKKSKGYTDVVKVPEGSTHLKVRQYKAKGQSRYTAYLA
LRRPGGEYLLNGKFMISTSETIIPLNGSVLNYTGWSQRDEALHSLGPGAIQESLVVQILA
TDAKKPLDIRYSFFMPRKLPLPPRTIATASGTAAALSSAEIVTFTTEVPVTTDPPTTTPA
GPRWVTGSWMTCSRTCDTGWQSRTVQCKDLQGKLSKSCALNTRPSAFKHCLIKKC
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgtggcggattgttttgttgtgttgcgctctggagggttccgttgcgttcagcgcgttc
cggccacctgcgaacgcgtctctgctcgcacctgcccgcggcgtcgtgcgcaccgtggat
cggatttatcacgggggaggaaaagccggttaccttctgtacatggacgagcagcgcttt
cagctggatatggagcgggacgagtcgatactgtctcatcacttgggtttgaacgcggac
gcgtcgccgccgcgtcgggaatgcgtttaccgcggcaccgtcaattcaaacgcggagtct
cttgcggttttcaatctgtgcggcggcggacttgacggctttttcgcgctggatcacgca
cggtacaccatcacgccgctcatccgggcgaaggggcacgagaatgacgcgcacatcgtc
gaggacgccgacgcgacgcgcgctctccactactacacgcgcgacagcttcagtttcgaa
gcgatgcaggagaggcacagctgcggcacgcgcgaccgcaaaacgcgcagggataaaaag
cggaagcgcgacgaggatgctcgcagatggtggacgaagtttgagaagcccgacgcgctg
acgcgacgcaagcgctccgtgtctcgcgctcggcacgtggagctgctgctggtcgccgat
gcgtccatgacgaagaagtacggcaaggacctgcaccactacctgttgacgctcgcgtcc
atcgcgtccaaactctacggccacgccagcatcgagaaccccatccgcctgtcggtggtt
aaagtcgcgattctgtccgagaacgagaaggggatcgaagtgaccaaaaacgccgccgcg
acgctcaagagcttctgcaagtggcagaatcagcagaacccgctggatgacgatcatcag
catcaccacgacgcggcgatcctcttcaccaggcaggatctgtgcggtcatcactcgtgt
gatactctcggtatggctgacgtgggaactgtgtgttcgccggagcggagctgtgccatc
atcgaagacgacgggctgcacgccgccttcaccgtagcacatgagatcgggcatctgttg
ggtctgtcccacgacgactccaagttctgcgaggagagattcggctccaccgaagacaag
cggctgatgtcgtccatcctgacctccatcgacgcgtccaaaccctggagccgctgcaca
tccgccaccatcactgacttcttcgatgacggaaacgccgagtgtctgctggacgttcct
catctgcctctcttgggaccggaggagctgccgggtcagaaatacgacgccgtccagcag
tgccgtctggccttcgggcccgagtacaccgtttgtcccgggatggacgtgtgctcgcgt
ctgtggtgcgccgtcatcaggaagggacagatggtgtgtctgaccaagaaactgccggct
gtggaaggaactccgtgcgggaagggccggatctgtctgcaggggaaatgtgtggacaaa
actcgaaagagacactactcgacgtcgaatcacggcagctggagctcctggggtccgtgg
ggttcgtgttctcgcacgtgtggtggcggggtccagtttgcacatcgtctctgtaacaac
cctcctccccgaaacaacggccgctactgcaccgggaagagagccgtctaccgctcctgc
aacgtcaccccgtgcccttcagccggtaagagtttccgtcaggagcagtgcgagctgcgt
aacgggcctcagacggatcctaaaggagtaaagaccttcgtggaatgggtgccgaagttt
gccggcgtgcttcccaaagacatgtgcaaactcacctgcagggccaaagggacgggatac
tatgtcgtgttctcacagcgggtggttgatgggacggagtgccggccgtacagcagttct
gtgtgtgtgaaggggaagtgcgttcgaaccggctgcgacgggatcatcggctctaaactt
caatatgacaagtgcggcatctgcggcggcgacggaaacagctgcatcagagtggctgga
aacttcaccaagaagagtaagggctacacagatgtggtgaaggttcccgagggctcgacg
cacctgaaagtccgacagtacaaagccaaaggccagtcgcgctacactgcgtatctggcg
ctgcggcggcccggaggagaatacctgctcaacggaaagttcatgatctccacgtccgag
actattatcccactcaacggctccgttctcaactacaccggctggagtcagcgggacgag
gcccttcacagcttgggccccggggccattcaggaaagcctggtggtgcaaattctggcc
acggacgctaagaaaccactagacatccgctacagcttcttcatgccgcgcaaattgccg
cttccgccgcgaacgatcgccacggcttcgggaacggccgcggcactgtcgtcggcggag
attgtgacgtttacgaccgaggttcctgtgacgacggatcctccgacgacgacgcccgcg
gggccacgttgggtgacgggatcgtggatgacgtgctccagaacttgcgatacgggttgg
cagagtcgcacggtgcaatgcaaggaccttcaagggaagctgtccaagagctgcgcgctc
aacacccggccgtctgccttcaaacactgcctgattaaaaaatgttga
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