Labeo rohita (rohu): 127169302
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Entry
127169302 CDS
T09007
Symbol
hcfc1b
Name
(RefSeq) host cell factor 1b
KO
K14966
host cell factor 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03083
Polycomb repressive complex
lroh04980
Cobalamin transport and metabolism
lroh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
127169302 (hcfc1b)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
127169302 (hcfc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127169302 (hcfc1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lroh01009
]
127169302 (hcfc1b)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127169302 (hcfc1b)
03029 Mitochondrial biogenesis [BR:
lroh03029
]
127169302 (hcfc1b)
Protein phosphatases and associated proteins [BR:
lroh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127169302 (hcfc1b)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
127169302 (hcfc1b)
HMT complexes
COMPASS/SET1 complex
127169302 (hcfc1b)
MLL-HCF complex
127169302 (hcfc1b)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
127169302 (hcfc1b)
Mitochondrial biogenesis [BR:
lroh03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
127169302 (hcfc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
127169302
NCBI-ProteinID:
XP_050972509
LinkDB
All DBs
Position
8:complement(37027401..37055136)
Genome browser
AA seq
1933 aa
AA seq
DB search
MASSGTSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTAT
NQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKPK
APKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRPGSNVAG
WDIPITYGVLPPPRESHTAVVYTEKTSKKSRLVIYGGMSGCRLGDLWTLDIDTLTWNKPA
ISGAAPLPRSLHSATTITNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMLW
ETILMDTLEDNIPRARAGHCAVAINNRLYVWSGRDGYRKAWNNQVCCKDLWYLETDRPQP
PSRVQLVRANTNSLEVSWGAVPTADTYLLQLQKYDIPAATAATSPTVNPTPSLPINSPKS
PAPAAAAPAAQSLPLSGVTMVPQIPSPTTAMPSSPLAASPRGPAILKVAAPHSTPGTSVV
TVRQATPGGKSPVTVTSLPAGVRMVVPAQSTQGTPIGSSPQMSGMAALAAAAAATQKIPP
SSTTTVLNVPAGAIVKTVAVTPGSTSLPATVKVASPVMVTNPATRMLKTAAAQVGTSAIS
TPNTPTRPIITVHKSGTVTVAQQAQVVTTMVGGVTKTITLVKSPITMGGSGPLISSLGKV
MSVVQTKPVQTSAVTGQAGSSPVTLIQTKTPLPAGTILKLVTSADGKPTTIITTTQAGGA
GTKPTILGISTVSPTATNKPGTTIIKTIPMSAIQQGAAGLTSSAGVKSPITIITTKVVTP
GTGTPGKIITAVPKLTAGAGQQGVTQVVLKGAPGQPGTILRTVPMGGVRLVSPGSVSAGK
PTVTTLVVKGTTGVTTLGTVTGTVSSSVAGANVASGNASLVTPVTTLASIATLSSQVINP
TAITVSAAQTNLGTATIQSGAQPTQVTLITTPSGAEAQPAQDLPVSILASPTSEQPSTTG
ADAGDGSGDGATTVTLVCSNPPCETHETGTTNTATTASAKMGTEQICSNPPCETHVTGTT
NTATTASANMGMAQQVCTNPPSETHDTGTTNTATTASCNMGSKEMGTVNSKTAASSTATS
SASGSEPATPVSEGGAGAGSMRPENLRTGTTNTSTTARSNMGSDQTGTVQSSNKSQAAIS
STLMPVSSSPPSETNEADTVNTSLASGAVQQVCSNPPCETHETGTTNTATQSGSSMGSGQ
TNVVQRVCSNPPCETHETGTTNTPTQASSSIGAGQNGTVQRVCSNPPCETHETGTTNTPT
QASSSIGAGQNGVVQRVCSNPPCETHETGTTNTPTQSSSAIGAGQNGTVQMVCSNPPCET
HETGTTNTATTATSSLETGEGAAQQAGDGPSDSGTSSEPTSSTEPANPTTQSRAVTTVTQ
ATPTPGPSVPEISSMAGSAVVAEVPGEAEAMEQTSAEAVAAGEEPMQTECQGELGEEAAV
RVVAIDESAAGEEGTMLQVHVAMEAQPGQGDQAEQMEAGVEGAEAMSLAAQDSEALALPQ
ELMSAEGQQTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVLSES
DGGHDGQQPTTIPIVLTQQELAALVQQQQQLQEAQAAAAQQLSAEAAAAALPTEGLAPAD
SLNDPASESNGHEMATAVTGAVARLLPRTSAETLAPSSTFAPSQPMVVASPAKIQAATAL
AEVANGIESAAGKPEAPPAVVKPPVKKENQWFDVGIVKVTNMVVTHYYVPADDSAVTDDD
SGAIPDYSRMKKIELSPGTAYKFRVAGINACGRGTFSEVSAFKTCLPGFPGAPCAIKISK
SPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQTVEAKASAPAQLAFMRVYCGPNPSCLVQ
SSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETSKDGSAAKPAAKRPVSSPD
MKGAGPKKARSDQ
NT seq
5802 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcagggacctcggttttgcagccgcgctggaagagggttttgggctggtct
ggcccggttcctcgcccgagacacggacaccgagccgtggccattaaagagctgatggta
gtgttcggaggagggaatgaaggcattgtggatgagctgcacgtctataatacagccacc
aatcagtggtttattccagctgtccggggtgacattcctcccggctgtgccgcatatgga
tttgtgtgcgacggcaccagactccttgtgtttgggggcatggttgagtacggaaagtac
agcaatgatctttacgagctacaggccagtcgatgggagtggaaacgtttgaagcccaaa
gcccccaagaacggcccaccaccatgtcctcgcttgggccacagcttttccctggttgga
aacaaatgctacttatttggtggactggcaaatgacagtgaagatcccaaaaacaatatc
cccagatacctgaatgacctctacacactcgagctacgcccgggatctaacgtagcaggc
tgggatatccccatcacatacggtgtgcttccccctccacgtgagagccacactgccgtt
gtctacacagagaaaacatccaaaaagtcacgtctcgtcatctatggcggcatgagtggt
tgccgtcttggagacctctggactttagacatagatactttaacctggaacaaacctgcc
ataagtggtgcggcacctttgccccgcagtctccattctgccaccactataaccaacaag
atgtttgtatttggtggctgggttcctctggtcatggatgatgtcaaagtagcgacacac
gagaaggagtggaagtgcaccaacacactggcctgcttaaatctagactctatgttatgg
gaaaccatcttgatggacacactcgaggataatatcccaagggcacgagccggacactgc
gctgtggctataaacaataggctgtacgtgtggagtggaagagacggataccgcaaagcc
tggaacaaccaagtttgctgcaaagatttgtggtatttagaaacagatcgtcctcagcct
ccatcgcgtgtgcagctggtccgtgccaacaccaactctctggaggtgagctggggggca
gtgcctaccgctgacacttacctgctgcagctgcagaaatacgacatccctgctgcaaca
gctgccacatcaccaacagtcaaccccaccccgtctctacccatcaactcacctaagagt
ccggcacccgccgctgccgctcctgcagcgcagagcctgcccctctctggggtcacaatg
gtgccacaaattccttcacccaccaccgccatgccaagcagcccgcttgcagcctcacct
cgtggaccagctattcttaaagtggcagcgcctcattccacccccgggacatcagtcgtt
actgtgcgtcaggctactccgggaggaaagtccccagtcacggttacatcacttcctgca
ggtgtccgaatggttgtccccgcacagagcacccaggggacgccaatcggtagcagtcct
cagatgagtggcatggctgctttggccgcagctgcagccgccacacagaagatcccgccc
tcttccacaaccactgtgctaaatgttccagccggagccatcgtaaaaaccgttgctgtg
actcctggatccacatctctgcctgctactgtcaaagtagcttcacctgtaatggttact
aatcccgcgacccgaatgctgaaaacagctgcagctcaggtcggcacttccgccatctct
actcctaacactccgactcggccgatcatcactgtgcacaaatcaggcacagtaaccgta
gcccagcaggctcaggttgtcaccaccatggtcggaggagtcaccaaaactataaccctt
gttaaaagccccattacaatgggtggcagcggtcctctgatctccagccttggaaaggtg
atgtctgttgtccagaccaaaccagtacaaacctctgcggtcaccgggcaggctggaagc
agtcctgtcactctcatacaaacaaagactcctctgcctgctggtaccatcctgaaactg
gtcacgtctgctgatggcaagcccaccacaatcattacaactacacaggcaggaggggct
ggcaccaaacccactatcctgggcatcagcactgtctctccaactgccaccaacaaacca
ggaaccaccattattaaaaccattcccatgtctgctatccaacaaggtgcagcaggtctg
acaagcagtgctggtgtcaaatcccccatcacaattatcaccactaaggttgttactcct
ggcactggtactccggggaaaatcataacagctgtgccaaagctgacagcaggtgcggga
cagcagggtgtgacacaggtggtcctgaagggggctcccggacagccaggcactatcttg
cgcactgtgcctatgggtggagtgcgtctggtttcaccaggcagtgtgtctgctggaaaa
ccaactgttaccacgctggttgtcaagggcaccacgggagtcacaactctgggtacagta
actggtactgtatcgtctagcgtggctggggccaatgtggcaagtggtaacgccagcctg
gtgactccagtcaccacacttgcctccatcgccacattgtccagtcaggtgatcaatccc
acagccatcactgtatctgctgcccagaccaaccttggcaccgctacgatacaatcggga
gcccagcctactcaagtaaccctgatcacgactccaagcggtgctgaggcccagcctgcg
caggatctacccgtctccatcctggcctctcccacctcagagcagccctccaccaccggt
gctgatgctggcgacggctctggcgatggtgctaccaccgtgacactggtctgctccaac
cctccgtgtgagacccacgagacaggaacgaccaacacggctacaacggcttctgccaaa
atgggcaccgaacagatttgttccaaccctccctgtgagacgcacgtcacaggcaccacc
aacacagcaaccaccgcctctgcaaacatgggcatggcacagcaggtgtgcaccaaccct
ccctcggagacccatgacacgggcaccaccaacacagccaccactgccagctgcaacatg
ggatctaaagagatgggaactgtgaacagcaagacagcggcgtcgtcgacagctacgtct
tcagcttctggctcagaaccagcaacgcctgtctcagagggcggtgctggtgcgggcagc
atgcggccggagaatctccgcacgggtaccaccaacacctccactaccgcccgctccaac
atgggctctgaccaaacgggaacggtgcagagctccaacaagagccaagctgcgatctct
tctacgctgatgcctgtttcctctagccctcccagcgaaacgaatgaggcagatactgtg
aacacttcacttgcgtctggtgccgtccagcaggtctgctcaaatcctccttgtgagaca
cacgagacgggcacgaccaacacggctacgcagtcaggctccagtatgggcagtgggcaa
accaatgttgtacaaagggtgtgctccaatccgccttgtgaaactcatgaaacgggcact
accaatacgccgacccaggcctcgtcttctattggtgctggacagaatggcactgttcaa
agggtgtgttctaatccaccgtgtgaaacacacgagacgggcaccaccaacacgccgacc
caggcctcgtcttctattggtgctggacagaacggtgtggttcaaagggtgtgctccaat
ccaccctgtgaaacccatgaaacgggcaccaccaacacgccgactcagtcctcatctgct
attggtgctggacagaatggcactgtgcagatggtttgttccaatccaccctgtgaaaca
catgagacgggaaccaccaacacagccaccacagcaacaagcagcttagaaactggagaa
ggagcagcccagcaggccggcgatggaccgagtgacagcggcaccagctcagaacccaca
tcatctacagaaccagccaatcccacgacacaaagcagagccgtcacaacagtaacacag
gccacgcccactccaggaccatcagtaccggagatttcgtctatggctggatctgcagta
gtggctgaggtcccaggggaggcggaggccatggagcagaccagcgctgaggccgtagca
gcgggagaagagcccatgcagaccgagtgtcagggagagctgggtgaagaggctgccgtc
agggtcgttgccatagatgaaagtgcagcaggcgaagagggcaccatgctacaggttcat
gtcgcaatggaagcgcagccaggtcaaggggatcaggctgagcagatggaggctggcgtg
gagggcgcggaagcgatgagtctcgctgctcaagactcggaagccctcgctctgccccag
gagctgatgtctgcagaaggacagcaaaccaccctcatggtgaccggactgacacccgag
gagctggctgtgacggcggcggctgaggctgcagcgcaggctgcggctacagaagaagca
caggctcttgccatccaggcagtcctacaggcagctcagcaggctgtgctcagtgagagc
gacggaggtcacgatgggcagcaacccacaaccatccctatagttctgacccagcaggag
cttgctgctctggttcagcaacagcagcagctccaggaggcacaggcggccgcagcacag
cagttaagcgctgaagcagccgcagctgcgttgccaactgaaggcttggcacctgcagac
agcctcaatgacccagcgtctgagagcaacggccatgagatggcaactgctgttacggga
gctgtggcccgtctccttcctcggacttctgcagagactctagccccatcaagtactttt
gcaccatctcaaccgatggtggtcgccagtcctgccaagatccaagcggccactgcttta
gctgaggtggccaatgggattgaatcggcagctgggaagccagaagcacctccagccgtt
gtaaagccaccagtgaagaaagagaatcagtggtttgacgttggaatcgttaaggtcaca
aacatggttgtcacgcactattatgtgccagcggatgattcggcggttaccgatgatgat
tctggcgcaataccagactacagccgaatgaagaagatagagctttctccaggcactgca
tataagtttcgcgtggccggcatcaacgcgtgcggccgcgggacgttctccgaggtctct
gcttttaagacctgcttacctggcttccctggagcaccgtgcgccatcaaaatcagcaag
agccctgatggtgcccacctgacctgggagcctccttcagtgacgtcagggaagatcatt
gagtattcagtgtatttggctatccagagctcacaaacggtcgaggctaaagcgtctgct
ccggctcagcttgcctttatgcgggtgtactgtgggcccaacccgtcctgcctagtgcag
tcgtctagtctctccaacgcccacattgactacacaaccaaacccgccatcatcttccgc
atcgccgcccgcaacgagaagggctacggccctgcaacgcaagtcaggtggctacaagaa
accagtaaagatggctctgcggccaaacctgcagcaaagaggccggtctcgtcacctgac
atgaaaggcgctggtccaaagaaggccagatctgaccagtga
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integrated database retrieval system
