Labeo rohita (rohu): 127169374
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Entry
127169374 CDS
T09007
Name
(RefSeq) IQ motif and SEC7 domain-containing protein 2 isoform X1
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127169374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127169374
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
127169374
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
IQ_SEC7_PH
SOS1_NGEF_PH
PH_19
RHG20_PH
MYCBP_helical
SlyX
Motif
Other DBs
NCBI-GeneID:
127169374
NCBI-ProteinID:
XP_050972653
LinkDB
All DBs
Position
8:21294512..21380876
Genome browser
AA seq
1558 aa
AA seq
DB search
MDAGQGSPESPNRAVEYLLELNNIIESQQKLLETQRRRIEELEVQLDRLSQENKDLRLDR
QPCPPPPPPPIHPVQPPTSNASTSTNIYANQSHNSGPIPIPIPAPAPPPPPPPVPPRDRR
INANTHMRLGQSLSAGANATERERDRDRERERDGATTSLGSSLPRQPEGDSSNKDSVEGD
PHCPDTASFSDSTCSQGPYLGNSERYGNIRNIPGPQGPPVAPSSPATLAWAQRTRNQPAS
LALRKQEEEESKRCKALSDSYELSTDLQDKKVEMLERKYGGYFLSRRAARTIQTAFRQYR
MNKNFQRLRSSASESRMTRRIILSNMRSQYSFDERQPQVQPQTPQQQQQGRYTSHHTSTL
SSASQTGTTNTQQDTDSPAHCPSDREEYSHTDDAFNKQVTSLADSMDDTLTCQSGRGDSQ
DGGGGGGEESEDFGECVWSNKPTSRRGVMGEQERLGVMHEDSTATSYSDVTLYMDDGMPC
SPLSIERVPSSTDTEYWGVSSGAGGREDSRDTEGGGSNNSRRSTPCTECRDFRLRGSHLP
VLTIEPPSDSSVDMSDRSDRGSLSRQLLYEQEPTAGGSPQGTLKHNPVPRTPNPCAAQGQ
TRPPGRPIPSPLPTHVPHHTMMHHHHHPHLHHPLHHHPLPHIHHPYQDPTSPSPTQPPLT
PLSSSSSAPLPATGLEHSDGDNDSLNSTTNSNETINCSSGSSSRDSLREPLPPLGKQTYQ
RESRHSWDSPAFNNDVVQRRQYRIGLNLFNKKPEKGIQYLIERGFVSDTPVGIARFILER
KGLSRQMIGEFLGNRQKQFNKDVLDCVLDEMDFSGMDLDDALRKFQAQIKVQGEAQKVER
LVEAFSQRYCVCNPALVRQFQNPDTIFILAFAIILLNTDMYSPNVKAERKMKLEDFIKNL
RGVDNGQDIPRDMLVGIYQRIQKWELRTNDDHVSQVQAVERVIVGKKPVLSLPHRRLVCC
CQLYEVPDPNRPQRSGVHQREVFLFNDLLVVTKIFQKKKTSVTYSFRQSFPLVEMQVHMF
QNSYYPHGIRLTSAMPGSERKVLIVFNAPSQQDRTRFTSDLRESVAEVQDMEKYRVESEL
EKQKGVMRPGLLSGDGGGVGGIKTEAVNGTLGRPSLDDTYTAGEGLKRTALSSSLRDLSE
TGKRGRRNSVGSLDSTIEGSIINSPQPHQRLPMGGAVPGCYGLEDYRPHRPILSPGVGVG
GGPGQLHNAVGNMGGVPGISDRGGGPGSSSGGSNSGSFLGSLFGSKRAKPPAPLIPPGPH
YPAPVPPPTTGGPPPPSPSALSQSDPGGPSKIQALHAQYCHNNFGQPPPPYHHHHRYHMQ
AVAPGHPPVIHHTLQRGSLPRRGPPIPSHAQLQQQLSHHAMQQGRYVNMACTPPPLSPHS
PNSPIAPFTFYHMHPNPIRHVRVPGPTGKLPLTLSHSQPHPHAHSHVHSHIHSHPVHAHS
PHPLLDHSGHQTHFVFSPPPQAPSSITARHIPQGAAHYIPQYPPLSSIPPPPPHSPLPPP
SSPHTPLTPLTPLSPLAPQLPGPMGVQSGGGGGGGGASNSSTVGSSKSKPINRISTVV
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgggcagggcagcccggagagccctaaccgggcggtggagtacctgctggag
ctcaacaacataatcgagagccaacagaagcttctggaaactcaacggcggcgtattgag
gagcttgaagtgcagctggaccggctcagccaggagaacaaagacctgaggttggaccga
cagccttgcccgcccccacctccacctcccattcaccccgtccagccaccaacttccaac
gcttcaacctccactaacatctacgccaatcagagccacaacagcgggcccatcccgata
cccatcccggctccggctcccccgcccccacctccacccgtgccaccacgggaccggcgc
atcaatgccaacacgcacatgaggctcggccaaagcctgtcagctggagccaatgccacg
gagcgagagagggaccgagacagggaacgagaaagagacggcgccactaccagtttggga
agctctctgccgagacagccagaaggagactcgtccaacaaagacagtgtggagggagat
cctcattgtccagacacggctagcttttccgacagcacctgtagtcagggcccatacctg
ggcaactcggaacgctacgggaatatccgaaacattcccggcccacaggggcctcctgtg
gccccttcaagcccagcgaccctggcctgggcgcaacggacccgcaaccaacccgccagc
ctggcactccgcaagcaagaggaagaagagagcaagcgctgcaaagcgctctctgacagc
tatgagctctccacggacctgcaggacaagaaggtggagatgctggagaggaagtatgga
ggttacttcctgagcagacgcgcagctcgcacgatacagacggcgttccggcagtatcgc
atgaacaagaactttcaacggctgcgcagttctgcctctgaaagccgaatgactcgccgg
atcatcctgtcgaacatgcgttcgcagtactcgtttgacgagcgacagccacaggttcag
ccccagacgccccagcagcagcagcaaggtcgatataccagccatcacacttcgactctg
agctcagccagccagacaggaaccacaaacacacagcaggacactgactcacccgcacac
tgtccttcagacagagaggagtactcgcatacagacgatgccttcaacaaacaggtaaca
tctctggctgactctatggacgacactctgacgtgtcagtccggccgaggggactctcag
gatggtggtgggggaggcggtgaggagagtgaggatttcggcgagtgtgtgtggagcaac
aaacctacctcgcgtaggggggtcatgggggagcaagaacgtttgggggtcatgcacgag
gacagcacagctacttcgtacagtgacgtcacgctttatatggacgacggcatgccgtgt
tctccactatccatcgagcgggttccctccagcacggacacagaatactggggcgtcagc
agtggggccggaggacgcgaagatagccgggatacagagggcggtgggagcaataacagc
cggcgtagcacgccatgcaccgaatgccgagatttccggttgcgggggtcacacctaccc
gttctcactatagagccacctagtgacagctctgttgacatgagtgaccgttcagatcga
ggctccctcagcaggcagctgctttatgaacaggagcctacggcaggtggatcacctcaa
ggcactctcaaacacaaccctgtccctcgcacgcccaatccctgtgcggcacagggccag
acgcgacccccgggtcgccccatcccatctcctcttccaacacacgtaccacaccacaca
atgatgcaccaccatcaccaccctcaccttcaccatccgctgcaccaccaccctttgccg
cacatccatcacccctaccaagaccccacgtctccctcacccactcagcctccactcacg
ccactttcttcctcgtcctccgcgccactaccagctactggcttggagcactcagatggg
gacaacgactccctgaactccactaccaactccaacgagaccatcaactgcagctcaggc
tcttcgtctagggacagtctaagggaaccgttgcctcctctaggaaaacagacctatcag
agagagagcaggcatagttgggactcgcccgccttcaacaacgacgtggtgcaaagaagg
caataccgcatcggactgaacctcttcaacaagaaaccagagaaggggatccagtatttg
atagagaggggttttgtatcagacacacctgtgggcattgcacgtttcatcctggagagg
aaaggcctaagcagacagatgatcggggagtttctgggaaaccgacagaaacagttcaac
aaggatgtgttggactgtgtgttggatgagatggatttctcaggcatggatctggatgac
gccctgaggaagtttcaggctcagattaaggttcagggggaagcccagaaggtggaaaga
ctggtagaggccttcagtcagagatactgcgtgtgcaaccctgcgctcgtccgccagttt
cagaacccagacactatctttatcctggcatttgccatcatccttctcaacacagacatg
tacagccccaatgtcaaagctgagaggaagatgaagctggaggattttatcaagaacctt
agaggagtggataatggacaggacattcccagggatatgttagtgggcatctatcagcgc
attcagaaatgggaactcaggacaaacgatgaccatgtatctcaagtgcaggctgtggaa
agagtcatcgtaggcaagaaacctgtgctttctctgccacatcgcagactagtgtgctgt
tgtcagctgtatgaagtccctgaccccaatcgaccccagcgaagtggagttcaccagcgt
gaggtcttcctctttaatgacctgctagtggtaacaaagatctttcagaagaagaagacg
tctgtgacgtacagtttcagacagtcttttcccctggtggagatgcaggttcatatgttc
cagaactcctactatcctcacggtatcagactgacatcagcgatgcccggcagtgagcgt
aaggtcctgattgtgttcaacgctccaagccagcaggaccgaacgcgcttcaccagtgac
cttcgtgagagtgtcgctgaggttcaagatatggagaaataccgtgtagagtctgagttg
gagaagcagaagggtgtgatgcgtccagggctcctgagcggagatgggggcggggttggt
ggaatcaagactgaagctgtgaacggcactctgggtaggcccagtctggatgacacgtac
acagcaggggaggggcttaaacgaacagcacttagctcctcactgagagacctctctgag
acaggaaaacgaggccgtagaaacagcgttggctctttggatagtactattgaaggatcc
atcattaacagtcctcagccgcatcaacgcttgcccatggggggcgccgttcccggctgc
tatgggctggaggactaccggcctcaccgccccatcctgagccccggagtaggggtgggg
ggtgggccggggcaacttcacaacgccgtaggcaatatggggggggtccctggcatcagc
gatcgaggtggggggccggggagcagttctggagggagcaattccggttccttcctgggc
tccctgtttgggagcaagcgcgccaaaccccctgctccccttattccccccgggccacat
tacccggcccccgtgccacctcctactacaggaggaccgccgcctccgtccccctccgcc
ctcagccagtcagaccccggtgggccatccaagatccaggccttgcacgctcagtactgt
cacaacaactttggccagcctccacccccataccaccatcatcatcggtaccacatgcag
gccgtcgcccctggccatccgcccgttatccatcataccctacaacgagggtccctccca
cggcgcgggccgcccattccttcacacgcccagctccagcagcaactatcccatcatgct
atgcagcaaggccgctacgtcaatatggcctgcacccctccgcctctgtccccgcattcg
cccaattcccccatcgcccctttcaccttctaccacatgcatcccaatcccattcgccac
gtacgggtgcccggtcctaccggcaagcttcctctcaccctgtctcattctcagccccac
cctcacgcccactcccacgttcactctcatatccacagccatcctgtccacgcccacagc
ccacacccattgctggatcactccggccatcaaactcacttcgttttttcgccgccccct
caggcaccatcctccatcaccgcccgccacataccccagggcgccgcccactacatcccg
cagtatccgcccctctcctccatcccacctcctccgccacattccccgttaccgcctcct
tcgtccccacatacccccctcacccctcttaccccgctctccccgctggccccgcagctc
ccaggaccaatgggggtgcagtcgggcgggggcggaggaggaggcggagccagcaacagc
agcacggtcggcagctccaaatccaaacctatcaaccgcatcagcacggtggtgtga
DBGET
integrated database retrieval system
