Labeo rohita (rohu): 127169433
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Entry
127169433 CDS
T09007
Symbol
adamts13
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X1
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127169433 (adamts13)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
127169433 (adamts13)
Peptidases and inhibitors [BR:
lroh01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
127169433 (adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_CR_3
TSP_1
ADAMTS_spacer1
Reprolysin
ADAMTS_CR_2
TSP1_spondin
TSP1_CCN
Reprolysin_3
Reprolysin_5
Reprolysin_4
Adt-1
Reprolysin_2
Peptidase_M10
CUB
Motif
Other DBs
NCBI-GeneID:
127169433
NCBI-ProteinID:
XP_050972764
LinkDB
All DBs
Position
8:complement(8262941..8292615)
Genome browser
AA seq
1551 aa
AA seq
DB search
MWSNRRTALIWLFLVPCLLKTTGLLISQCTLQRDFLDSLKPQDLFYYFDTISMKSVPHFE
LVWVNCSRNESFRGLWRCLFQSEGESFELGQHRDEQPVSCPTSLEMVINLTVSVVKKRED
MCCEQLKLLRPAHTRTLLPICHGQLQGLIQSGERRLYIRPMLQKHTDHLKELSTDLPSGV
PHLLLTHTLPVRTRLKQPKSQFRLRRTPLGSEVTHLELAVVVGPDVYDFHRQDTERYILT
NLNIASELLRDVTLGANIRVHLVRMVILTEPKPDIQISENITSSLKSVCEWGQKVNPDAD
TDPLHADLLLYITRFDLVLPNGNKLVRGVTQLGGVCSSQWNCVITEDTGFDLGITIAHEI
GHSFGINHDGLGNTCSSSGFMMASDGGYNSVDLTWSQCSRAQLHNFFSSGKAECVKDVPV
LGGSVQDWRPGLFYGVDDQCRIAFGSSATACSFTNGDMATCRVLSCHINPHDRSSCTRLL
VPLLDGTECGPSQWCLKGRCVSPSTLGSSVMVHGSWSSWSEFSPCSRTCGGGITYRKRQC
NNPRPAFGGNVCKGQDTEAELCNQQPCESTQLEFMSQQCSATDQQPLSVSPDSGSVYTWI
PAVGYSSGDAQCKLMCRSREQDFMVSRGSQFIEGTRCEAGHTIPRGAISACLGGKCQLFG
CDGVMHSGKVEDVCGVCGGNGSTCQFISSTYSGGEAGEYVTFLNLPLNASQVHVINTKPV
FTHLAVLLNDKYVVSGDGNPGLSIKYPSPLEKSPIIYNLYLTPDHLPQTEELTISGPVTD
KIHIQVFRKYGQEYGDLTTPNISYQYYSSEAVSVKRAAEGRWSTVISACSVTCGTGIQKI
SQHCVDVLTSDRLEDELCSSSPQTADQLQPCFQPDCPPSWEVGEFGACSAPCGVGERVRS
VTCVQKQGTVKVKLPASDCTLDSKPQTTESCNPQICPARWQVSEPGECSAVCGPGEAQRT
VSCVRSHHGSDSEVDQNLCSEPKPPEHIPCVVDVCPVGWDSQSKVIHTGLHVMPRSRMVS
VYVWSPVIGQCSKTCGNGSQQVWFSCVDHQSHLEVPEFLCDRTSKPEMYTQPCSLSICPV
TWRYIQGPCSVSCGGGVAKRVLYCSQRMEGGDGNRDLVVGESACQSVARPAEVVECNTEA
CPARWQAGELGDCSVSCGMGVTVRSVQCVQYEGGIERVVEEDRCDPVNKPPITAPCFTHV
CSFHWDVHEWSECSVSCGDGIQSRTVSCMGPSSPLPVSPFLCLHLPKPITIQACYSPDCS
SAQTSTPEPKSTHIQSEPRRGEGTQRTTPAPAPAVRMKMWKSFSAIAPTADVIKSTISTT
TKEPPQTSICGQLLLQDSGTIDLRNVTQMRCIFAIGRPLDEVIQIKIISSTLKCQQKENI
ALYDRRILMRLCERMTGKTLKSRSNVLLVRQSLLTPGNGVLLFYQSTKNKKSHHGECDVQ
LFSPSGVIENPIKSAAASNTQNCRVFIDAPPAFRIQIRALSVLNNTDTNFTYILIRDVDA
LKTTIFRGSQLFLWSSSGNRAEVEFHGEYQQIKGMFRAEYSYINPSEEQPV
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcaaacaggagaacagctctgatctggctctttctggttccatgtttgttaaaa
acaacaggtctactgatttcacaatgcactttgcagagggattttttagattcactgaaa
cctcaagatttattttattactttgatactatttccatgaaatcagtgcctcactttgag
ctggtgtgggtgaattgctcaagaaatgagtctttcagagggctatggaggtgcttattt
cagagtgaaggagagagttttgagctgggccaacacagagatgaacaacccgtgtcctgt
cccacaagtctggagatggtgatcaacttgacagtcagcgtggtgaagaaacgggaggat
atgtgctgcgagcagctgaagttactgagaccagcacatacaagaacgcttctccctatc
tgccatggccaattacaaggtctgattcagtcaggggagaggaggctgtatattcgccca
atgcttcaaaaacacacagaccatctgaaagagcttagtacggatttaccttctggtgta
cctcacctgctattaacccacacattaccagtgaggacacgtcttaaacagcctaagagt
cagtttaggttacggaggacacctctggggtcagaggtcacacatctggagctcgcagtg
gtggtgggtcctgatgtctatgattttcataggcaagacactgagagatacatcctaacc
aacctcaacattgcctctgagcttctgagagatgttactctcggtgccaatataagagtt
caccttgttcgtatggtcattctcactgagccaaagccagacattcagatctccgaaaac
atcacttcttctctaaaaagtgtttgtgagtggggtcagaaggtcaaccctgatgctgac
actgaccctttacatgcagatctgctgttatatattaccaggtttgatctggtgttaccc
aatgggaataaacttgtgagaggtgtgacccagctgggcggagtctgttcttctcagtgg
aactgtgtgattacagaggataccggctttgatcttggcatcaccattgctcatgagatt
ggccacagttttggcataaatcatgatggactaggcaacacatgcagctccagtggtttt
atgatggcatctgatggaggttataacagtgtcgatctcacatggtcccagtgcagcaga
gctcagctccacaacttcttcagttctggtaaggcagagtgtgtgaaggatgtgccggtt
ctgggtggttcagtgcaggactggaggcctggtctcttctatggagtggacgatcagtgt
cgtatagcatttggcagctcagctactgcttgctctttcactaatggcgatatggcaacc
tgtcgtgttttgtcctgtcatatcaaccctcatgaccgtagctcatgcactcgtctcctt
gttccactcttggatgggacggagtgtgggcccagtcagtggtgtttgaagggccgctgt
gtgtctccttctactttgggttcctctgtgatggttcacggctcttggtcttcatggtct
gaattctctccctgctcacgaacatgtggaggaggaatcacttaccgcaaaagacagtgc
aacaaccccaggccagcctttggcggtaacgtctgtaaaggacaggacacagaagctgaa
ctttgtaatcagcagccctgtgagtcgactcagctggagttcatgtctcagcagtgctca
gccacagaccagcagcctctgtcagtgtctccagactccggctcagtctacacctggatc
cctgctgtcggctacagctcaggtgatgctcagtgtaaactgatgtgtcggtcacgtgag
caggacttcatggtgagtcgtgggtctcagttcatcgaggggacgcggtgtgaagctggt
catactataccacgtggtgccatttctgcctgtttgggtggaaagtgccagctgtttggc
tgtgatggagtaatgcattctgggaaggtggaggatgtgtgtggagtgtgtgggggcaat
ggctccacctgtcagttcatctcaagcacctattcaggcggagaagccggagagtatgtc
acattcctcaaccttcctctgaacgcctctcaggttcatgtgattaacacaaagccggtt
tttacacatcttgcggtgttattaaatgataaatacgtggtgtctggagatggaaaccca
ggtctgagcatcaaatacccttcacctctggagaaaagccccataatctataacctgtac
cttacacctgaccacctgcctcaaactgaagagctcactatctctggaccagtcacagac
aaaatccacatacaggtgtttcggaaatacgggcaagaatatggagaccttaccacccca
aacatctcataccagtactactcatccgaagctgtttcagtgaagagagctgctgagggc
agatggtccactgtcatatctgcatgctcagtgacctgtggcacaggcatccagaaaatc
agtcagcattgtgtggatgtgctcacaagtgatcgtctggaagatgagctctgcagttca
tcccctcaaacagcagatcagctgcagccctgcttccagcccgactgcccacccagctgg
gaggtcggtgagtttggagcctgcagcgccccctgtggtgtgggagagcgagtgcgctct
gtcacatgtgttcagaagcagggtacggtgaaggtaaagctgcctgcatcggactgtacg
cttgactctaaaccccaaaccactgagagctgcaaccctcaaatttgtcctgccagatgg
caggtgtctgagcctggtgagtgttcggctgtgtgtggacctggagaggctcagagaaca
gtgtcgtgtgtccgctcccatcacggatctgattctgaggttgaccaaaacttgtgctct
gaacccaaacccccagaacacattccctgtgtggtggacgtttgtcctgtcggctgggat
tcccaaagtaaggtgatccatacaggcctgcatgtaatgccccgctccagaatggtttcg
gtttatgtttggagtcctgtgattggccagtgctccaagacctgtgggaacggatctcaa
caggtttggttctcctgtgtggatcaccagtcacatctagaagtgccagagttcctttgt
gatcgtaccagtaaaccagaaatgtacacccagccctgcagcctatcaatatgtcctgtt
acgtggcgttacatacagggcccatgcagtgtgtcttgtggaggtggtgtagcgaagaga
gtcctgtactgttcccagaggatggagggaggagacggaaacagggatctggtggtggga
gaatctgcttgtcagtctgtggccagacctgcagaggtagtggagtgtaatactgaagcc
tgtccagccaggtggcaggctggagagctgggcgactgttcggtgtcatgcgggatgggt
gtaactgtgaggagtgtgcagtgtgttcagtatgagggaggtatagagagggtcgtggag
gaggacaggtgtgacccagtaaacaagcctcccatcacagcaccatgtttcacacacgtg
tgttctttccactgggacgtgcatgagtggagtgagtgttcagtctcatgtggtgatggg
atccagtctcggactgtgtcctgcatgggcccgtccagccctcttcctgtcagtcccttt
ctttgcctccacttaccaaaacccatcaccatccaggcctgctatagtcctgactgttcc
tcagctcagacctccacaccagagcccaagagcactcacatccagtcagagccccggagg
ggagagggaacacagaggaccacaccagctccagctccagctgtcagaatgaagatgtgg
aagagtttctcagccattgcgcctacagcagatgtgataaaaagcaccattagtactacg
acaaaagaaccaccacagaccagtatctgtgggcaactcctgcttcaagactcaggaact
attgatctgcgtaacgtgactcagatgaggtgtatatttgctatcggtcgacctcttgat
gaggttattcagatcaaaatcatatccagcactcttaaatgccagcagaaggagaacatc
gccttgtacgacagacgcatcctgatgcgtctctgtgagaggatgacgggtaaaacacta
aaatctcgatcaaatgtcctactggtgcgtcagagcctcctgacccccggcaacggagtg
ctgctgttttatcagagcacgaagaacaaaaaaagccatcatggagaatgtgacgttcag
ctgttctctccttctggagtcattgagaatccaatcaagagcgcagccgcctccaacact
cagaactgtcgcgtgttcatcgatgctccacctgctttcaggattcagatcagagcgctt
tctgtgctcaacaacactgatacaaacttcacatacatactgattcgggatgtggatgcc
ttgaagacgaccattttcagagggtctcagctcttcctctggagctcctcaggaaacagg
gctgaagtggaattccatggggagtatcagcaaatcaaaggcatgttcagggctgagtat
tcatacataaacccttctgaagaacaaccagtgtag
DBGET
integrated database retrieval system
