Labeo rohita (rohu): 127169499
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Entry
127169499 CDS
T09007
Symbol
rmi1
Name
(RefSeq) recQ-mediated genome instability protein 1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
127169499 (rmi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127169499 (rmi1)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
127169499 (rmi1)
FA (Fanconi anemia) pathway
127169499 (rmi1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
127169499
NCBI-ProteinID:
XP_050972884
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Position
8:4577086..4581246
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AA seq
558 aa
AA seq
DB search
MSVGEVQVTQAWLRSQWHIQVPHAWLDACVNWIKEEADNESVSQTLLNQRVLEQWLLTDL
RDLSHPVLPERISEAQKTELNNCYCLQMDSLLDVSQPAYTQLQSIRGTDCSNNEVSAVTP
ETQRPWEAKPTRMLMLQLTDGVQSLEGMEYRPIPALNANLPPGTKLQLIGPIIVRLGVLL
LKAENVKVLGGEVEQFLEIYSQRKVLCRTLGLPEENHPQAEEPDDQDLLEAVVDHQVADS
GYSSMASEASLRPPHRESQPRPQATPISRQDDWEMDEIPDDDFRSIPDNFDDVPQNVADV
PEDFDDIPLEELESVMSPIDSEVMPSRQEHSEIKHLNADLPNTEERSLVSFNNRNLNEVP
DVSVASSSMNANLPEEPSQTFHSKNLLSNAHRNEVPQTSVATSFTSTAGSSSCERDAPTP
PYLCMLQAGRWPPAKVQVLQLQAFIVTLIGNLRSSSGVWKLGATISDGTGYLDVDLSDAM
LTKLIGYTATEARVLRKDPARRGEVDGGILHCQRELVDMCCMMSVQVDQTGKGVVLSASP
LSNRECSEMQERVKARRN
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgggtgaagtccaggttacccaggcatggctgcgttctcaatggcacatccag
gtccctcatgcctggctggacgcttgtgtgaactggataaaggaggaagcggataatgaa
tctgtgtctcaaacgctgctgaatcaacgcgtcctggagcaatggctactgactgacctg
cgagatctgtcccacccagtgctccccgaaagaatatcggaggcacagaaaacagaactg
aacaactgttactgtcttcagatggactccctactagatgtcagccagcctgcctacact
cagctgcagagcatacggggcaccgactgctccaataatgaagtctcggcggttacgcca
gaaacgcaaaggccgtgggaggccaaaccgacacgtatgttgatgttgcagctcacggat
ggagtgcagagcctggagggtatggaataccggcccattccggctctaaatgccaacttg
ccacccgggacgaagctacagctaatcggacccatcatcgtccgtctcggagtgttgctt
ttgaaagcagagaacgtgaaggtgttaggtggggaagtggaacagttcttggagatatac
tctcagaggaaagtgctttgcaggacacttggtttgcctgaggagaaccatccacaagct
gaggaaccggatgaccaggacctcctagaagctgtggtagatcatcaagtagctgacagc
ggctacagcagcatggcttcagaagcttccttaagaccacctcatcgtgagtcacaaccc
cgtccccaagcgacacccatttccaggcaagatgactgggaaatggatgaaatcccagat
gatgactttagaagcattccagacaattttgacgacgttccacaaaatgtggcggatgtt
cctgaggacttcgatgacatcccgttagaggagctggaaagtgtgatgtcgcctatagat
tcagaagtcatgccaagcagacaggaacactcggaaatcaaacatcttaatgcagactta
cccaatactgaagaacgaagccttgtaagttttaacaacagaaacctaaatgaagttcct
gatgtatccgttgcaagttcctccatgaatgcaaacttacctgaagagccaagccaaact
tttcactctaaaaatctgcttagcaacgcccaccgtaatgaagttcctcaaacatccgtt
gcaacttcctttacaagcacagcaggatcttctagttgcgaacgagatgcacctactccg
ccgtacctctgcatgctacaggctggccgttggccgcccgccaaagttcaggttttacaa
ctacaagcgttcattgtcaccctaataggaaatttgcgcagtagcagtggtgtttggaaa
cttggggccaccatatcagatggaaccgggtacttagatgtggatctgtccgacgccatg
ctcaccaaactcatcggctacacggcaacagaggcccgagtgctgaggaaagacccggcg
agacgcggtgaggtggacggtgggattctgcattgtcaacgagagctggtggatatgtgc
tgtatgatgagcgtgcaggtggatcagacgggaaaaggagtcgtgctgtctgccagtccg
ctctctaacagggaatgctccgagatgcaggaaagagtgaaagcgaggaggaattaa
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