Labeo rohita (rohu): 127169554
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Entry
127169554 CDS
T09007
Symbol
rapgef1a
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127169554 (rapgef1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
127169554 (rapgef1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
CCD
Motif
Other DBs
NCBI-GeneID:
127169554
NCBI-ProteinID:
XP_050972972
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All DBs
Position
8:28610291..28649055
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AA seq
1082 aa
AA seq
DB search
MSGKIDSKQESQRSHLTSFTMKLKDKFHSPKIKRTPSNKKSKPPPEQPVKSPEKTVTKSL
SRLEEHEKEVVSALRYFKTIIDKMAVDKKVLEMLPGSASKVLEAIMGLVQLDGKILSSSR
VSSCLSRLYQSLANLIRWSDQVMLEGVNLEDKETVATVTTVIKAVLDGVKELVKVAIEKQ
EHPSPTTPVKTLPSVASPQRVPEPPVIESKETVSNDTPTPAETTETPNDAPDEEVAPPKP
PLPGLKVPEHCPPALPPKKRQSAPSPTRIAVVAPMSRTTSGSSLPIGICRQDNEALQRRF
SGGSHSYGGESPRLSPCGSIGILSKSDEQLSSLEQDSGQCSRNTSCETLDTAESYDPDYD
FLHQDLSSIDQIPPAHTGGCLSPLPESHNESSSLPVQLQSIPPALPKKERRPPPPQVERL
YSQYDNVPDEDVQTPPFPLFASMPPSNPGVFMGNYGPAENAQIPQSPPPLPEKKSRHILK
YMQFMEDYSEPLPSVFYQTPQSESIYEQRNRKRFQEVYGLSDSFSSSDETLPPPALPPKQ
RQLASSHSASPSSSSSSSLSCQLQQCASGPGPGETETALSLSASNSSLNRQGSLPVPTSE
SANDEGGEGEYVNLYSSNQANGDVTLSNGDSSCGAEDSLQDSASEHSKDPADREGWKQKC
VDSEMTSDKVDELYLIDHDEIISHLTLKQENDDGPDVRSGSGDILLVHATETDRKDRVLY
CEAFLTTYRTFLTPEDLIKKLRYRYTRFSLSSDIIRQRASKNTFFVLVRVVDELCLVELT
EDILKQLMELVFNLLCNGELTLARVLRKNILDKVQQKKLLQYTNSLKTLAARGVAARPGT
LHDFRSHEIADQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRS
LIIQQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLE
EYCTLIDSSSSFRAYRAALADVEPPCIPYLGLILQDLTFVHLGNPDLIEGKINFSKRWQQ
FNILDTMRRFQQVHYDLKHNDDIVSFFNDFSDHLAEEALWELSLKIKPRNITRRKTEREE
RT
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaaaaatagacagtaagcaagaatcccagcgttcccacttgacgtcctttacg
atgaaactaaaggacaaattccactctcccaaaatcaagcggacaccatcaaacaaaaaa
tccaaaccgccaccagaacaacccgtgaagtctccagagaagaccgtgaccaagagtctg
agtcgattagaggaacatgagaaagaagtggtcagcgctttgcggtactttaaaacgatt
attgacaagatggcagtggacaagaaggtcttggaaatgcttcctggttctgctagcaaa
gttctggaggccatcatgggcttggtacaacttgatggcaagatcctgagcagttcaaga
gtgtcctcctgtctcagtcgactctatcaaagtcttgcaaacctcattcgctggtcggac
caagtgatgctggagggggtgaatttggaagataaagaaacagttgcaaccgtcaccact
gtgatcaaagcagtgctggatggtgttaaggagctggtaaaagtcgccattgagaagcag
gagcacccctcccctacaacacctgtcaaaaccttgccttctgtcgccagcccacagcgt
gtcccagagccccctgtcattgagtcgaaggaaaccgtctcgaatgatacccctacccca
gctgagaccacagagaccccaaatgatgctcctgatgaggaggtggcccctcctaaaccc
cctctacctggactcaaagtgcctgaacattgtccaccggctctccccccaaagaaacgt
cagtcggcaccgtctcccacaaggattgccgtggttgcgccaatgagtcgtaccacaagt
ggatcaagtcttcctattggtatctgtcgacaggacaatgaggccttacaaaggcgtttt
tcgggaggcagtcactcctatggaggggaatcgccacgactgtccccatgtggcagcatt
ggcatactgagcaagtcagatgaacagctgtcgtctttggagcaggacagcggacagtgc
tctcgtaacaccagctgtgagactctcgacacagcagagagctacgaccccgactatgac
ttcctacatcaggacctgtctagcatcgaccagatccctcccgcacacacggggggttgt
ctgagccctctccccgagtctcacaatgaatcatcctccttgcctgttcagcttcaatcg
ataccgcccgctcttccgaagaaggaacgacgaccccctccgcctcaggtggaacgactg
tactctcaatatgacaatgttcctgatgaggacgtgcagactccaccgtttcctctattt
gcttccatgccaccctcaaaccctggagtgtttatgggaaactatggccctgctgagaac
gcacagatccctcagagccctccgcccctgccagagaagaagagccgccacatcctaaag
tacatgcagtttatggaggactattctgagccgctgccttccgttttctaccagacgcct
cagagcgaaagcatttacgagcagcgcaataggaagcgttttcaggaagtgtacggtctc
agcgactcctttagcagcagtgacgagaccctccctccgcctgcgctgccacccaaacag
agacaactggcttcctcacactctgcgtctccttcctcctcctcttcctcctctctgtca
tgtcagctgcagcagtgtgcgtccgggcctggccctggtgagacagaaaccgctctcagc
ctttccgcatctaactcctctctgaaccgccagggctccctgcctgtccctacgagcgaa
agtgctaatgatgaaggtggggagggtgaatacgtcaatctgtattcatccaaccaagcc
aatggagatgtgactctctccaatggagactcttcctgtggcgctgaggactcacttcag
gactcggcttcagaacacagcaaagatccagctgacagagaaggctggaagcagaagtgt
gtggactcagagatgacctcagacaaggtggacgagctctatctgatagatcacgatgag
atcatttctcacctaacactaaagcaagagaacgatgacggccctgatgtcagatctgga
tcaggcgatattttattagttcatgccaccgaaacagatcgcaaagatcgagttttatac
tgtgaagcttttttgaccacataccgaacgtttcttaccccagaggacctcattaaaaag
ctccgctatagatatactagattttctctcagctctgacattatcagacaacgagctagt
aaaaacaccttcttcgtgctggtgcgcgtcgtggacgagctttgtttggtggagctgaca
gaagacatcctgaagcagctcatggagcttgtgttcaatcttttgtgtaacggtgaactc
actttggcccgggtgctgcgcaagaacatcctagataaagtccaacagaagaagttgctg
cagtacactaattctctcaaaacgttggctgcacgaggtgtggctgccaggcccggcact
ctgcatgacttccgtagtcatgagatcgcagaccagctgactctcctcgatgcagaactg
ttttataaaatagagatcccagaggtgttactttgggcaaaggaacagaatgaggaaaag
agccccaacctgacccagttcacggagcacttcaacaacatgtcatactgggtccggtcc
ttaataatccagcaggagaaagctcaggatcgggaaaaacttcttttaaagtttatcaaa
attatgaagcacttaagaaaactcaataacttcaactcctacttggcaatattatcagcg
ttggattcagcgcctatcagaagactggaatggcagaaacaaacgtcagagggtttggag
gaatattgcactttaattgacagttcctcctccttccgggcgtacagagcagctttggcg
gatgtggagcctccgtgtataccgtatctaggtctcatcctccaggacttaacttttgtg
catcttgggaatcctgacctcatcgaaggaaagataaacttttccaaacgctggcagcag
ttcaatatcctggacactatgaggcgcttccagcaagtgcactatgacctcaaacacaac
gacgacattgtctcgttcttcaacgacttcagtgaccatctagccgaggaggcattgtgg
gagctctctttgaagatcaagccccgcaacatcactcgccgaaagacagagcgagaggaa
aggacgtag
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