Labeo rohita (rohu): 127169577
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Entry
127169577 CDS
T09007
Symbol
msi1b
Name
(RefSeq) RNA-binding protein Musashi homolog 1b isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127169577 (msi1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127169577 (msi1b)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
127169577 (msi1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
NID
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
127169577
NCBI-ProteinID:
XP_050973013
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All DBs
Position
8:complement(11889321..11911495)
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AA seq
373 aa
AA seq
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MPIPLSTLSASFLAPYSDGIHSRAMESEGSQSNLSSSDSPHDPCKMFIGGLSWQTTQEGL
KDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAF
PRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVT
FENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSSRGRARVMPYGMDAFMLGIGM
LGYPGFQAATYAGRSYTSLTPGYTYQFPEFHLERTPLLTSPHPPELTAIPLTAYNPMAAA
AAAAAVVRGSTPSRSAGFLGTSSPGPMADLYGTANQDSAVSSYISAASPAPSTGFSHSLG
GPLIATAFTNGYH
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgccaatccccctctccacactttctgcctcctttctcgcaccgtactcggacgggata
cacagccgcgcaatggagtcggaaggcagccaaagtaacctgtcctcctcggactctccg
cacgacccctgcaaaatgttcatcggtggtctgagttggcagactacgcaagagggtttg
aaggactacttctgcaagtttggtgaagtgaaagagagcatggtgatgagagatccagtt
acaaaacgctcgaggggtttcggatttgtcacatttgttgaccaagctggcgtggacaaa
gtcctggcccagaccagacatgagctggactcgaaaactattgacccgaaagttgccttc
ccgcgacgagcccagcctaagttggtgactcggacaaagaaaatctttgttggaggtctg
tcagtgaacactactattgaagacgtaaagcagtactttgaccagttcggaaaggtggat
gatgccatgcttatgtttgacaaaaccaccaacaggcacagagggtttggatttgtgacc
tttgagaatgaagatgtggtggagaaagtctgtgagatccatttccacgagatcaacaac
aagatggtggagtgtaagaaggcccagcccaaggaagtgatgtcacccacgggctcttca
agaggtcgtgctcgtgtcatgccgtatggaatggacgccttcatgcttggcataggaatg
ctgggttatccagggttccaggcagcaacatatgcgggtcgcagctacactagtctcaca
ccaggatacacatatcagttccctgaattccacttagagaggaccccccttctgacatca
ccccacccccctgagctcacagccattcctctaacggcgtacaaccccatggcggcagcc
gcagcagcagcagctgtggtcagaggctcaacaccttctcgctcagctgggtttttaggt
accagcagccctgggccaatggcagatctgtatgggacggccaatcaggactcagctgtc
agtagctatatcagcgctgcaagtcccgctcccagcactggattcagccacagcctcggg
ggccctctgattgctacagcatttactaacggctaccactga
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