Labeo rohita (rohu): 127169651
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Entry
127169651 CDS
T09007
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C a
KO
K08533
RAR-related orphan receptor beta
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127169651 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lroh03310
]
127169651 (rorca)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127169651 (rorca)
Nuclear receptors [BR:
lroh03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
127169651 (rorca)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
127169651
NCBI-ProteinID:
XP_050973121
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Position
8:24093153..24107925
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AA seq
479 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAIYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQERAGGLGNGVSGHAGD
EVGENGSSHGRAYSRGSSTTLSDLDDITTLPDGLLFDLPLTPEEAADYCSLELLGGSGGS
SSSSQSSPESNRQEFSDTTHIKHEYQTLHETGLYSRSLLTPPEGCSLMEIERITQNVVKS
HIETSQYSTEELKKLAWTLYTPEEMRVYQNKSTEMMWQQCAVHITNAVQYVVEFAKRISG
FMDLCQNDQIILLKAGCLDVLLIRMCRAYNPINNTLLFDGKFASPQLFKALGCDDLVGAV
FEMAKTLSRLQLSEEEMALFTATVLLSPDRPWLTDTQKVQKLQEKVYVALQHCLHKSGAP
EEKLAKMVSKLPMMKSICNLHIDKLEFFRLLHPETAYNFPALYREVFCSEISFPDSTEG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgagagcacaaatcgaagtaatcccgtgcaagatttgcggggacaagtcatcaggcatc
cactatggggtgatcacttgtgaaggctgcaagggcttctttcgccgaagtcagcagaac
aatgcgatatactcctgctccaggcagaggaactgccttattgaccgaaccaatcgcaat
cgctgccaacactgccgcctgcagaagtgtctggcgttgggcatgagccgtgatgcggtg
aagtttggacgcatgtcaaaaaagcagcgcgacagcctctatgccgaggttcagaagcac
cagcagtcccaggagcgggcagggggtttgggcaacggtgtatccggccatgctggtgat
gaggtcggggaaaacggcagcagccacggccgggcctacagtcgtggctccagcaccaca
cttagtgacctggatgacataaccacgctaccagacggtctcctgtttgatctgccgctc
acaccggaggaagctgctgactactgcagcctggagctgctgggaggaagcggtgggagc
agttcgtcctcccagagttctcctgagtcgaacagacaggagtttagtgacacgacacac
atcaaacacgaataccagaccctgcacgagacgggactttacagtcgctcgttacttacc
ccacctgaaggctgttccttgatggaaatcgaacggattacacagaatgtggtaaaatcc
cacatcgagacaagtcagtacagtacagaagagctgaaaaaattagcttggaccctctac
acacctgaggagatgcgggtctaccaaaacaagtccacagagatgatgtggcagcagtgt
gcggtgcacatcacgaacgccgtccagtacgtggtggagtttgccaagcgcatctctgga
ttcatggacttgtgccaaaatgaccagattatccttctcaaagcaggctgcctggacgta
ctgttgatccgaatgtgtcgggcctacaaccccatcaacaacactctgttgttcgacgga
aagtttgcaagcccgcaactctttaaagctctcggttgtgatgatctggtgggtgctgtg
tttgagatggctaaaaccctgagtcggctacagctgtctgaagaggagatggccttgttt
accgccaccgtgcttctgtctccagaccgaccttggttgacagatactcagaaggtgcag
aaacttcaggagaaggtctatgttgcactgcaacactgtcttcataaaagtggtgcccct
gaggagaaactggctaagatggtgtccaagttgcccatgatgaaatctatttgcaacctc
catattgataagctggagtttttccgtctccttcacccagaaacggcctataacttccct
gctctctacagagaggttttctgcagcgaaatctccttcccagactccactgagggctaa
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