Labeo rohita (rohu): 127169678
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Entry
127169678 CDS
T09007
Symbol
notch2
Name
(RefSeq) neurogenic locus notch homolog protein 2 isoform X1
KO
K20994
Notch 2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127169678 (notch2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_2
EGF_CA
Ank_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
EGF_Teneurin
Ank_4
EGF_3
JAG1-like_EGF2
EGF_DL_JAG
cEGF
Motif
Other DBs
NCBI-GeneID:
127169678
NCBI-ProteinID:
XP_050973173
LinkDB
All DBs
Position
8:complement(23591305..23647016)
Genome browser
AA seq
2505 aa
AA seq
DB search
MGQLPGVSSGKVILIVICCLKVSFALQCVDPVKPCVNNATCVTFHNGTGYCRCAPGFLGD
YCQHNDPCYVGYCLNGGECTVSVAGVPGSPSCVCPLGFTGQHCEIQKNSTCFPNNPCTNG
GKCSLLSNDQYKCQCPRRWTGRHCEQEDTCLSGPCANGGTCRALPNREFSCTCPSGYHGP
HCLNDTDECASSPCKNEGVCLNTPGSYRCNCQPGFTGIHCETDYVPCFPSPCLNGGTCRQ
MTDTTYICHCLPGFNGTNCELNIDDCPNHRCQNGATCMDGVNTYNCQCPPEWTGQFCTDD
VDECRLQPNACQNGGTCSNTRNGYNCVCVNGWSGPDCSENIDDCAAEPCTAGSTCIDRVA
SFVCSCPPGKTGLLCHVDDACTSNPCKMGAQCDTNPVNGKFNCNCPSGYKGSTCAEDIDE
CVIGPNPCEHGGSCKNTEGSFTCNCAPGYTGPRCEQDINECGSNPCQNDATCLDQIGDYT
CICMPGFEGLHCEIDINECASSPCLNNGRCLDQVSRFVCECPQGFTGEMCQVDIDECAST
PCHNGAKCLDRPNGYECECAEGFTGALCTDNINDCEPEPCHHGECIDGIATFTCKCYPGY
MGPICSEQIRECLSDPCQNRGRCVDMVNMYQCNCQPGTSGVNCEINYDECASNPCQHGIC
EDGINEYKCVCKPGYTGERCSEEINECSSNPCLSGGTCVDKVNGFQCLCPLGTHGPLCHS
GADHCSPMPCKHGECIEQQDGYVCACEPGWEGKNCEREKNECQSNPCHNGGICKDHHNGY
TCVCARGFAGFNCEININECESNPCLNQGTCVDGVNSYSCHCTLPYKGRRCEEKLVPCDS
QPCQRRGVCQPSLDYTSYTCLCHSGWEGAQCTEDVDECKKNPCQNGAHCRNTVGSYRCEC
QPGYTGVNCQTNIDDCSSNPCRNGGTCVDKVGRFLCECRDGFYGERCEQEMDECASNPCW
NGGRCTDYVNSYTCQCPPGYDGINCERDIPDCTETSCLNNGTCVDGINRFTCRCRHGFSG
QFCQFELNECDSHPCKNGGTCIDGLGTFHCTCPLMYNGKTCESMVNVCSKIKCQNGGTCV
QKEMDWRCSCQHGWTGLYCDIPNMSCQAVAKNKGVAVDMVCKHAGRCIDKDNTHQCMCQR
GYMGSYCEQEVDECLSNPCRNGGTCMDYQGGYDCKCKAGYQGVNCEYDVDECQSNPCHNG
GTCIDLINRFSCACPPGTKGLQCEVDVNECAPEFGAHCKNGGQCVDGLGRYTCSCPPGFT
GEHCEGDVNECLSGPCHPTGSIDCVPLTNNYQCRCRLGYTGQHCELMVDLCQSKPCHNNG
RCAMNTSSLHGYTCNCQPGYTGFNCGDFEIFSCASLLCQNGGQCVEIKGRPQCRCQIGFT
GPHCESTTNRCMCLNGGTCVTDKSNKFSCQCLPGFTGPTCQSLVSCPYLECEQRAGDKVC
DPQCKNPECDWDGGDCTLFWDKPWKNCTASVPCWDLFHNGRCDPECDNAGCLFDSFECHK
GSSTGPSMCKYDRYCADHYANGHCNQGCNTESCGWDGLDCATDTPPKLAEGTLVVVVLLQ
PEEFLGDLKGFLRSLGTLLRTNLRLKLDEQKRPMVYPYYGSEENEFKNNIASMKQRGKRE
LEKEVIGSKVHLEIDNRQCSQHSDECISSADQAAAFIAAESLISALPYPVYSVASDPNPD
PPVQVFLYLVAVAAAIIMLILVLGVLAAKRKRKHGTLWLPDGFLAKKDSKRREPVGQDDF
GMKSMQKPQDGGLMDGSSTHHWSEEDLTKKPRVRDGTSTALKMTDPFVYDQSEWTPPTSQ
MEDKPLLPVGVDGGVDRREWTLQHHKAADITLTPPQADIDMDSLDVNVKGPDGFTPLMLA
SLRNGSSPDCGSMLGDEEEESGADEPGTNVITDLIGQGASLNAQTDRTGETALHLAARYA
RADAAKRLLDAGADANAHDNMGRTPLHAAVAADAQGVFQILIRNRATDLDARMNDGTTPL
ILAARLAVEGMVEELVHCHADVNAVDDHGKSALHWAAAVNNVDATLVLLKNGANRDMQDN
KEETPLFLAAREGSFEAAQVLLDHYSNRDITDHLDRLPRDTAQERMHHDIVRLLDQYNLV
HSPHSGPNHVGNGGGHSSMVCGTNGTGFMIGMRPGPQGKKNRRAGGKANAVAAGTAKDLK
EMKAKRRKKPAGGEVPNVVAVAGGSGNVTKAAGGLSESSVTMSPVDSLESPHSYAGEAVA
TSSTASSPPLLSSPSVRPMLPPVSHMLGQQQSWVGLAKHGYNGHMFGLMQPHQMNAGHTS
MQQQHHSPGMLTPMNVTMTREQLPPIVTFQMMAAGNGQSLLKQAQQSQMQAQGQNQAQSQ
HLHCNQSMMFPMPDVAMQHGLSHTLSHPHGHNHALPHGLPESQARQVASYQPRQSPVDKY
PTPPSQHSYATAGSEGTTPGHPAHNPSEHPYLTPSPESPDPWSSSSPHSNSDWSDVTTSP
TPLGNPHTLPPSCHTHIPEQAQLQPPSQAAQPTQSQQSQRSSVYA
NT seq
7518 nt
NT seq
+upstream
nt +downstream
nt
atgggccaattacccggtgtctcttcgggcaaagtcatccttatcgttatttgctgcctt
aaagtatcatttgctctgcagtgtgtggaccccgtgaagccctgtgtgaacaatgctacc
tgtgtcacttttcacaatggaacaggctactgcaggtgtgctcctggtttcttaggcgat
tactgtcagcacaatgacccatgctatgtgggatattgtctgaatggaggagaatgcact
gtgagtgtggctggcgtacctgggagccccagctgtgtgtgtcctctagggttcacaggc
cagcactgtgagatccagaaaaactccacctgctttcccaacaacccttgcaccaatgga
gggaaatgctcactcctctccaacgaccagtacaaatgccagtgcccccgtcgatggaca
ggtcggcattgtgagcaagaggacacatgcctgtctggcccatgtgccaacggtggtacc
tgtcgtgctctgcccaatcgtgaattctcctgtacctgtccttctggttaccatgggccc
cattgtctcaatgacacagatgaatgtgcctcctccccatgcaagaacgaaggcgtgtgt
ctgaacaccccaggctcttatcgatgtaactgccagcccggttttaccgggatccactgc
gagacggattatgtgccctgctttccatccccctgcctcaatggtggaacctgccggcag
atgacagacacaacttatatatgccactgcttgccaggttttaatggaacaaactgtgag
ctgaacattgatgattgtccgaatcaccgctgtcagaatggagccacatgcatggatgga
gtgaacacttacaactgccagtgcccacctgaatggactggtcagttttgcaccgatgat
gtggatgaatgcagactgcagcccaacgcctgtcagaacggaggcacgtgcagtaacaca
cgcaatggttacaactgcgtatgtgtgaacggctggagcggccctgactgctccgaaaac
attgatgactgtgcagctgagccctgcaccgccggctccacttgcatcgaccgcgtagct
tccttcgtttgcagctgccctcccggcaagactggtttgctgtgtcacgttgatgatgcc
tgcaccagtaacccttgcaagatgggagctcaatgtgacacaaaccctgtcaatggcaag
ttcaactgtaactgcccctcagggtacaagggcagcacgtgtgcggaagatattgatgag
tgtgtcatcggtccaaacccatgtgagcacggtggctcgtgtaagaacacagagggctcg
ttcacctgtaactgtgctccgggttacaccggtccgcgctgtgagcaggacatcaacgaa
tgtggctccaacccctgccagaatgacgccacctgcttggaccagattggagattacacc
tgcatctgtatgccaggctttgagggcttgcactgtgagatcgacattaatgagtgtgcc
agctcgccttgtctcaataacggtagatgtctagaccaggtcagccggtttgtctgcgaa
tgtcctcaaggtttcactggggaaatgtgtcaagttgacatcgacgagtgtgccagcacg
ccttgccataacggggctaagtgtctcgaccgtccgaacggctatgagtgtgaatgtgct
gaaggtttcacaggggcattgtgtacagacaacattaacgactgtgaacccgaaccctgt
caccatggcgagtgtatagacggaatagctaccttcacatgcaagtgttacccaggttac
atggggcccatatgcagcgagcagatacgcgagtgcttgagtgacccctgccaaaacagg
gggcgctgtgttgacatggttaacatgtaccaatgcaactgccagccaggcacatcagga
gtgaattgtgagatcaactatgatgagtgtgctagtaatccctgccagcacggaatctgt
gaggatggaattaacgagtacaaatgtgtctgcaaacctggatacacaggggagcgatgc
tccgaggagataaatgagtgcagttcgaacccgtgtctgagtggagggacgtgcgtggac
aaagtgaacgggtttcagtgtttgtgtccacttgggactcatggtcctctgtgccactca
ggtgcagaccactgcagccccatgccttgcaagcatggagagtgcattgagcagcaggat
gggtatgtttgtgcatgtgagccaggctgggaaggtaagaactgtgagcgagagaagaac
gagtgtcagtccaacccgtgccacaatggtgggatctgtaaagaccatcataatggctac
acctgcgtgtgtgcccgtggttttgcaggtttcaactgtgagataaacattaatgaatgc
gagtcaaacccctgtttaaatcagggaacctgtgtggatggagtcaacagctacagctgc
cactgcactctgccttacaaagggagacgatgtgaggaaaagttagtcccctgtgactct
cagccctgtcagagacgaggggtctgtcagccatccctggattacaccagctacacctgc
ctgtgccacagcggatgggaaggagcccagtgcacagaggatgtagacgagtgcaagaag
aacccgtgtcagaatggagctcattgtcggaacacagtgggcagctaccgatgcgagtgt
cagcctggatacactggggtcaactgccagaccaacatcgatgactgcagctccaatcca
tgtcgtaatggtggtacgtgtgttgacaaagtgggccggttcttgtgcgagtgcagagat
ggtttctacggcgagcgctgtgagcaggagatggacgagtgcgctagcaatccctgctgg
aatggaggtcgctgcactgactacgtgaacagctacacgtgccagtgtccacctggctat
gatggcatcaactgcgaacgtgatatcccagattgtactgagacctcttgtctcaacaat
ggaacgtgtgtggatggaattaaccgttttacctgccgctgtcggcatggattttctggt
caattctgccagtttgaactgaatgagtgtgactctcacccttgtaaaaatggtggcacc
tgcatagacggcctggggaccttccactgcacctgcccactgatgtataatggaaaaacc
tgcgagtcaatggtgaatgtgtgcagtaaaatcaagtgtcaaaatggaggtacgtgcgtc
cagaaggagatggattggagatgcagctgtcagcatggctggacaggcctgtactgtgac
atccccaatatgtcctgccaagctgttgccaaaaacaagggtgtggcggtggacatggtg
tgtaagcacgcagggcggtgtatcgacaaagacaacacacaccagtgtatgtgccagaga
ggttatatgggcagttactgtgagcaagaggtggatgaatgtctctccaacccctgtaga
aatggagggacatgtatggactaccagggtggatatgactgcaagtgtaaagcaggttat
cagggtgtgaactgtgaatatgatgttgacgagtgccagtcgaatccctgccataatgga
ggaacctgcattgatttgatcaaccgcttctcctgtgcatgtcctcctggcaccaaaggt
ttgcagtgtgaggtggacgtgaatgaatgtgccccagaattcggcgctcactgtaagaat
ggcggccagtgtgtggacggcttgggccggtacacttgctcctgccctcctggtttcacc
ggagagcattgtgagggagatgtgaatgaatgtctttctggaccttgccatccaaccggc
agcattgactgtgtaccgctcaccaataactatcagtgccgctgtcgtctcggttatact
ggacaacattgtgagttaatggtggatctatgccaatccaagccatgccacaacaacggc
agatgtgccatgaacacgagttcattacatggatacacctgtaactgccaacccggttac
actggcttcaactgcggtgattttgagatcttctcctgtgccagtttgctctgtcaaaat
ggcggacagtgtgtggagattaaaggtcgcccacagtgccgctgccaaattggttttacc
ggaccacactgcgagagcaccacaaaccgctgcatgtgtctaaatggtggcacctgtgtg
acggataagtccaacaagttcagctgccagtgtctacctggcttcaccggaccaacctgt
caaagtttagtttcctgcccgtatttggagtgcgaacagcgtgcaggagacaaagtatgt
gacccacaatgtaagaacccagaatgcgactgggatggaggcgactgtacgctgttctgg
gacaagccctggaagaactgcacagcttccgtaccctgctgggacttattccataatggc
cgctgtgacccagagtgcgacaatgcaggctgcctctttgacagctttgaatgccacaaa
ggttcatcgacgggcccaagcatgtgcaaatatgacagatactgtgcagatcattacgcc
aatggtcattgtaaccagggctgcaacacagaatcatgtggctgggatggtctggactgt
gccacagatactcctcccaagctggctgaaggtacactagtggtcgtggtgctgctgcag
cccgaggagtttttgggtgacctcaaaggtttcctgcgctctttggggacactcctgcgc
accaacctgcgacttaagctggatgagcaaaagagacctatggtgtacccatactatgga
agtgaggaaaatgaatttaaaaacaatattgccagtatgaagcaacgaggaaaacgagag
ctggagaaggaggttattggatcaaaggttcacctggagattgacaatcgacagtgttct
cagcactcagacgaatgcatttccagtgcagaccaggctgcagccttcatagccgccgag
tcactgatatcagcgctgccataccccgtctactctgtggccagcgatccaaatccagat
ccccccgtgcaggtttttctgtacctggttgctgtggctgcagctatcattatgttgatt
ttggtgctgggtgtgttggctgccaagcgcaaacgcaagcatgggactttgtggcttcct
gatggcttcctggcaaagaaagacagcaagcggagggagccagtgggacaggatgatttt
ggcatgaagagcatgcagaagccacaggatggagggttgatggatggcagttctacccat
cactggtctgaggaggatctaactaaaaaaccaagggtaagagatggtacctccacagcc
ctgaagatgacagatccctttgtttatgatcaatctgaatggacccctccaacctcacag
atggaagataagccattgcttcctgttggagtggatggaggagtggacaggagagagtgg
accctgcagcatcacaaagccgctgacatcactctcactccccctcaggcggacatagac
atggacagcctggatgtcaatgttaaaggaccagatggtttcactcctctcatgctggca
tctctacgaaatggcagcagccccgattgtggcagcatgctgggagatgaggaggaggaa
agtggcgctgacgagcctggtacaaacgtcataaccgacttaattggccagggtgcgtcg
cttaatgcccagacagatcgcacgggagagactgccctccacctcgctgcacgatacgcc
cgagctgatgccgcaaagagactgctggatgctggggctgatgccaacgctcatgataac
atgggccgcactcctctacatgcggccgtggcagcagacgcccaaggagtcttccagatt
ctcatccgtaaccgtgctacggatcttgatgcccgtatgaatgacggcaccacaccactc
atcctggcagccagactggcagtggagggcatggtggaggagcttgtgcactgccacgca
gatgtcaatgctgtggatgaccacggcaagtcagctttgcattgggccgcggctgttaat
aatgtagacgccactctagtgctattgaagaatggagccaatcgggacatgcaggacaat
aaggaggagacccccttgttcctggctgccagggagggcagctttgaagcggcccaagtc
ctcctagatcattattcaaatcgtgatatcaccgatcatctagaccgcctgcctcgtgat
actgcacaagaaagaatgcatcacgacattgtgcgtcttctagaccagtacaacctggtg
cacagcccacactccgggcctaaccacgtgggcaacggcggaggacactcctccatggtt
tgtgggacaaatggcacaggattcatgatcggcatgcgcccaggtccgcagggcaaaaag
aaccgccgagcaggaggaaaagcaaacgctgttgcagccggaacagccaaggatcttaaa
gaaatgaaggcgaagaggcggaagaagccggccggaggagaggtcccgaatgtggtggcg
gtggccggaggcagcggaaatgtcaccaaagcagctggtggcctctcagagagctcagtc
acaatgtcacccgtggattccctggagtctccacactcgtatgccggagaggcagttgcc
acctccagcacggcgagttcgcctccgctgcttagcagcccctccgtgaggcccatgctg
cctcctgtgagccacatgttgggccagcagcaaagctgggtgggtctggccaaacacggc
tacaatggccacatgtttggcctcatgcagccccaccagatgaacgcgggccacaccagc
atgcagcagcagcaccacagccccggcatgctcaccccgatgaacgtcaccatgacacgt
gaacagctaccgcccattgtcaccttccaaatgatggcggctggcaacgggcagagcctc
ctcaagcaggcgcaacaaagccagatgcaggcgcaggggcaaaatcaggcgcaaagtcag
cacctgcactgtaatcagagtatgatgttccccatgcctgatgtggcaatgcagcacggg
ttgtcgcataccctttcgcacccccacggtcacaaccacgcactccctcacgggctgcct
gagagccaagcacggcaagttgcgtcctaccagccacgccagagccccgtggataaatat
cctacaccaccttctcagcacagctacgccaccgccggctcagagggaaccacccctggt
catcccgcacacaatcccagcgagcacccctacctcactccttcccctgaatcgcccgac
ccctggtcctcctcgtcgccgcactccaactcagactggtccgatgtcaccacaagtccc
acccctctaggaaacccccatacactgcctccttcctgccacacacacattcccgaacaa
gcccagctgcagccaccatcgcaagccgcgcagccgactcagtctcagcagtcacagcgc
agcagtgtgtacgcgtag
DBGET
integrated database retrieval system
