Labeo rohita (rohu): 127169704
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Entry
127169704 CDS
T09007
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127169704 (hnf1a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
127169704 (hnf1a)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
Homeobox_KN
HTH_37
HTH_5
APP1_cat
Motif
Other DBs
NCBI-GeneID:
127169704
NCBI-ProteinID:
XP_050973216
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Position
8:complement(11801240..11811718)
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AA seq
564 aa
AA seq
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MEGGEGRRAGGERSSRLSALQEQLVWSLLGSGLSKELLIQAMGDLERERASAGAERTDRA
DGESSEEGDMDNPPPIFRELERLPPDEAARQRAEVDQLLQEDPWHVAKMVKSYMQQHNLP
QREVVESTGLNQSHLSQHLNKGTPMKNQKRAALYSWYVKKQAEINQQFNNASRGVVSGEE
SGEDVRKGRRNRFKWGPASQQILFQAYERQKNPSKEEREGLVEECNRAECLQRGVSPSQL
AGLGSNLVTEVRVYNWFANRRKEEAFRHKLALDVPYSSQSAPSTGQTLVSSPSPVLKYSQ
PVVCESLGTVRSSSGEDRGDSGRLASPVQLQPSHTLLDTHHHKQVSGGGSLPPVSTLTSL
HGVSGSSAAPPGLIMASLPSVMSLGDSSLLIGLTSSQPQTVPVINNVGGGFTTLQPISFQ
QQLHASQQQPIAQQLHSHIGPSSFMATMAQLPCHMYSKADLSSYPSSSLLSQAMVIADSN
SLGTLTNLTAVRQILTSDSEGHADTPIEEESLHLQSTSPEPVSSGSLELYPQTQTSETHP
SHLLSSSPGDIDPYIPTQMVSTAQ
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggagggaggcgaggggaggagagcaggaggagaacgaagcagccggctatcggccttg
caggagcagcttgtgtggtctttactgggatcagggctgtcaaaagagctgctgatccag
gccatgggagatctggagcgagaacgagcctcggctggcgccgagaggacggaccgggcc
gacggcgagagttcggaggagggagacatggataatccacctcctatcttccgtgagctg
gagaggctgccgccggacgaggctgcgaggcagagggctgaagtcgaccagctgttgcaa
gaggatccttggcatgtggctaaaatggtaaagagctatatgcagcagcacaacctacca
cagagagaggtagtggagtccactggcctcaaccaatcccatctctcccagcacctcaac
aagggcacacccatgaagaatcaaaagcgagccgctctgtacagctggtatgtcaagaaa
caggcagagatcaaccagcaattcaataatgccagtcgtggtgtcgtgtcaggagaggaa
tctggggaagatgtgagaaagggacggaggaatcgattcaaatggggcccagcgtcccaa
caaatcctgtttcaagcctatgaacgacagaaaaaccccagtaaggaggaaagggaggga
ctggtggaagagtgcaacagagcggagtgtcttcagaggggagtttctccatctcagctg
gctggcctgggctctaatttggtcacagaggttcgtgtatataattggtttgcaaatcgc
cgtaaagaggaggcatttcgccacaaactggcactggatgtgccctacagtagccagtca
gctccctctacaggccagacactagtatccagtccatcaccagttctgaagtacagtcag
ccagtggtgtgtgagagtctgggcacagtgagaagctctagtggtgaagacagaggtgac
agtggtcgtctagccagtccagtccaactacaacccagtcatacactcctggatacacac
catcacaaacaagtatctggtggtggctccttacctcctgtcagtactctcacttccctg
catggagtgtcaggatcctctgctgcccctccaggactcatcatggcctccctaccaagt
gtaatgagtctgggggactcctcactcctcataggcttgacatcctctcaaccacagaca
gtccctgtcattaacaacgtaggcggaggctttactacccttcagccaatctcgtttcag
cagcagcttcacgcttcacagcagcagccaatagcgcagcagcttcacagtcacattggc
ccaagctccttcatggcaacaatggcacagttaccatgccacatgtacagcaaggcagac
ttgagctcttacccctcctccagtctcctgtcccaggctatggtcatcgcagacagcaac
agccttgggacactgactaacctcacagctgttcgacagattctcacctcagattctgag
ggtcacgcagacactcccattgaagaggagtctttacatctgcagtccacttcacctgag
ccagtgtcttcgggcagtttggagctctaccctcagacccagactagtgaaacccatcct
tctcacctgctgtcttcctcacccggagatatagacccttacatccctacacagatggtt
tctactgcacaatag
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