Labeo rohita (rohu): 127169710
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Entry
127169710 CDS
T09007
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04142
Lysosome
lroh04144
Endocytosis
lroh05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127169710 (cltcl1)
04142 Lysosome
127169710 (cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
127169710 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127169710 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127169710 (cltcl1)
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
127169710 (cltcl1)
Exosome [BR:
lroh04147
]
Exosomal proteins
Proteins found in most exosomes
127169710 (cltcl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
HEAT_Nup120
TPR_Vps41
TPR_1
LVIVD
Gp18_dom_I
ATP-synt
TPR_Vps8
Motif
Other DBs
NCBI-GeneID:
127169710
NCBI-ProteinID:
XP_050973231
LinkDB
All DBs
Position
8:complement(32453928..32511382)
Genome browser
AA seq
1683 aa
AA seq
DB search
MAQILPIRFQEHLQLQTLGVSPASIGFSCLTMESDRFICIREKVGEQNQVVIVDLSDPTN
PIRRPITADSAIMNPASKVIALKAARTLQIFNMEMKSKVKAHTMTDEVLFWKWISVNTVA
LVTDTAVYHWSMEGDSQPIKMFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVGA
MQLFSVDRKVSQPIEGHAAAFGHYKLEGNPNASTLFCFSVRGQAGGKLHIIEVGQPQAGN
QPFTKKAVDVFFPPEAQTDFPVAMQIGTKHGVIYLITKYGYFHMYDLESGVCIYMNRISA
ETIFVTAAHESTSGIIGVNKKGQVLSVCVEEDNIVNYVTNVLQNPELALRLALRSDLPGA
EELLTHKFNTLFSQGSYTEAAKVAASAPKGVLRTAETIRRFQAVPAQGGQPSPLLQYFGV
LLDRGQLNKLESVELCRPVLQQGRTQLLEKWLKGEKLECSEELGDLVRAADVTLALSVYL
RANVPAKVIQCFAETGQFQKIVLYAKKMGYSPDWVMLLRSVMRSGPDQGLQFAQMLVQDE
EPLVNISQVVDVFMEGNLVQQCTSFLLDALKNNRPEEGPLQTRLLEMNLIHAPQVADAIL
GNQMFTHYERAHIAQLCEKAGLLQRALEHYSDPYDIKRAIVHTHLLNPEWLVNFFGSLSV
GDSIECLRAMLAANLRQNLQLSVQVATKYHEQLGTQTLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERVCRESNCYNAERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDTIKNLILAVRGDF
STDQLVEEVEKRNRLKLLLSWLESRVQEGCEEPATHNALAKIYIDSNNGPERFLRENLHY
DSVIVGRYCEKRDPHLAFVAYERGQCDLELIQVCNENSLFKSESRYLVRRKDPDLWAQVL
QETNPYRRPLIDQVVQTALPETQDPEEVSVTVKAFMTADLPNELIELLEKIVLENSIFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFSIFKKFDVNTS
AIQVLIEHMGNLDRAYEFAERCAEGSVWSRLAQAQLQNGLVKEAIDSYIKAGEPSAYMEV
VDAASRNENWEDLVKFLQMARKKAREAYVETELIFALAKTNRLTELEDFINGPNNAHIQQ
VGERCYEESMFEAARLLFNNVSNFARLASTLVHLGEFQAAVDSARKASCTRTWKEVCFAC
VDGEEFRLAQISGLHIVTHADELEELINYYQDRGYFEELIVLLEAALGLERAHMGMFTEL
AILYSKYKPQRMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIMTMMT
HPTDAWKDASFKELISKVANVELYYKSLQFYLDYKPLLLNDLLSVLAPRLDHSRAVSYFS
RVNQLRLVKPYLRSVQSHNNRSVNEALNNLLMEEEDYQGLRASIDAYDNFDSIGLAQRLE
THELIEFRRIAAYLYKSNQRWAQSIQLCKKDKLYKDAMQFAAESQDGAQAQDLLRWFVEE
GKRECFAACLFSSYDLLAPDVVLELAWRHGLVDFAMPYFIQVMREYLSKVDELSRQVKVD
KLQEAEDKRAAEDQTPEASSIVYGQQLMLSGSQTPVAPQAGFPAYGYAAPGFAPPAYGFN
LQP
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagattttaccgatccgcttccaggagcatctgcagctgcagacgctgggagtg
agcccggccagcatcggcttcagctgcctgaccatggagtcggaccgcttcatctgcatc
cgagagaaggtgggcgagcagaaccaggtggtgatcgtggacctgagcgacccgaccaac
ccgatccgccggccgatcacggcagacagcgccatcatgaacccggccagcaaagtcatc
gcgctgaaagcggcgcggacgctgcagatctttaacatggagatgaagagtaaagtgaag
gctcacaccatgaccgatgaagtcctgttctggaagtggatctcggttaacaccgtcgct
ctggttacggacacggccgtctatcattggagcatggagggagactctcagccaatcaag
atgttcgatcgtcacgccagccttgccggatgccagatcatcaactacagaacagacgag
cagcagaagtggctcctgctcatcgggatatcggcacagcaaaatcgtgttgtcggtgcc
atgcagttgttctctgtggaccgtaaggtttctcagcccatcgagggtcacgcagctgcg
tttggacattataaactggagggaaacccaaacgcttcaacgctcttctgcttctctgtc
agagggcaggctggaggaaagctgcacatcatcgaggttggtcagcctcaggccggtaac
cagccgttcactaagaaagcagtggacgtgtttttccctcctgaagcgcagacggacttt
cctgtggccatgcagatcggcactaagcacggcgtcatctacctcatcactaaatacggt
tattttcacatgtatgatctggagtcgggcgtgtgcatttacatgaaccgcatcagcgct
gaaaccatattcgtcacggcggctcacgagagcacgtccgggatcatcggggtcaataag
aaggggcaggtgttgtctgtgtgtgtggaggaggacaacatcgtaaattacgtgactaac
gtgctgcagaatcccgagctggcgttgcgtttggcattacgcagcgatcttcccggagcc
gaggagcttctgacacacaagttcaacacgctcttctctcagggcagctacacggaggcg
gccaaagtcgctgcgtcggctcccaagggtgtcttgcgaacggcagagaccatccggcgg
ttccaggcggtcccggctcagggcggccagccgtctcctctgctgcagtatttcggggtt
ctgctggaccgcgggcagctcaataagcttgagtcggtggagctgtgcaggccggtgctg
cagcagggacgaacacagctgctggagaaatggctcaagggagagaagcttgaatgttcg
gaggagttgggtgatctggtgagggcggctgacgtcactctggccctcagcgtttacctg
cgagcgaatgttcccgctaaagtcatccagtgctttgctgagacgggtcagttccagaag
atcgtcctctatgctaagaagatgggatattctccagactgggtgatgctgctgaggagt
gtgatgagatccggtcctgatcagggtcttcagttcgctcagatgctggttcaggatgaa
gaaccgctagtcaacatcagccaggtggtggatgtctttatggaggggaatctagtgcag
cagtgtacttcattcctattggacgctctgaagaacaacagaccagaggaggggcctctg
cagacacgcctcttggagatgaaccttattcacgcccctcaggtagcagacgccatcctg
gggaatcagatgttcactcactatgagcgcgctcacatcgctcagctgtgtgagaaagcc
ggtttactgcaaagagctctggagcattacagcgacccctacgacatcaaacgggccatc
gtacacacacacctgctcaaccctgagtggttggtgaatttctttggctctctgtctgtt
ggggactccattgagtgtttaagggccatgttggccgcaaacctgcgtcaaaacttgcag
ctgagcgttcaggttgcgaccaagtaccacgagcagctgggaacgcagacgctggtggag
ctttttgagtccttcaagagttatgagggtctgttttattttctgggctctatcgtgaac
ttcagtcaggaccccgatgtgcacttcaagtacattcaggcggcatgtaagacgggtcag
atcaaagaggtggagcgcgtttgtcgagagagcaactgctacaacgcagagcgtgtcaag
aacttccttaaggaagccaaactcactgatcagcttcctctgatcatcgtgtgcgaccgc
ttcgatttcgtccacgatctcgtgctctacctgtaccgcaatagcctgcagaaatacatt
gagatctacgtacagaaggtcaatcccagccggctgccggtggtggtcgggggtctgctg
gatgtcgactgctctgaggacaccatcaagaatctgatcctggccgtacgaggagatttc
agcaccgaccagctggtggaggaagtggaaaaaagaaaccgactgaagctgctcttgtcc
tggctggaatctcgtgttcaggaaggctgtgaagaacctgctacccacaatgcattggca
aagatctacatagacagtaacaacggtcctgagcgctttctccgagaaaacctgcactac
gacagcgtgatagtgggccgatactgcgagaagagagacccgcatctcgcctttgtggcc
tatgagagaggacagtgtgacctggagctcatacaggtgtgcaatgaaaactccctgttt
aaaagcgagtcgcggtatctggtgcgccggaaagatccagatctttgggctcaagttttg
caggagacaaacccctacagacggccgctgatagatcaggtggttcagacggctctgccg
gagacacaggatccagaggaagtgtctgtgacggtgaaggcgtttatgacggccgatctg
cccaatgaactcattgaacttctggagaagatcgttctggagaattctatattcagtgaa
cacaggaacctgcagaacctgctgatcctgacggccatcaaagcggaccggacgcgggtc
atggagtacatcaaccggctggacaattacgacgctcctgacatcgccaacatcgccatc
agcaacgagctgtacgaagaggccttctccatcttcaagaagtttgatgtcaacacctca
gcgatacaggttctgatcgagcacatggggaatctggaccgggcatatgagtttgcggag
cgctgcgccgagggttcggtctggagtcggctagctcaagctcagcttcaaaacggtctg
gtcaaagaagccatcgactcctacatcaaagcaggagagccgtcggcctacatggaggtg
gtggatgccgcaagtagaaatgagaactgggaggatctggtgaagtttcttcagatggcg
agaaagaaagccagagaggcatacgtcgagacggagctcatctttgctcttgctaaaaca
aaccgtctgactgagctggaggacttcatcaacggccccaacaacgctcacatacagcaa
gttggcgagagatgttatgaagagagtatgtttgaagccgcccggctgttgttcaacaac
gtgtctaatttcgctcgtctggcgtccacacttgttcacctcggcgagtttcaggcggcc
gttgacagcgcaagaaaggccagctgcacacgcacatggaaagaggtgtgttttgcgtgt
gtggatggagaggagttcaggttagcgcagatctctggtcttcacatcgtcactcatgct
gatgaactggaggagctcattaactactatcaggaccgtgggtattttgaggagctgatc
gtgctgctggaggcagcgttagggctggagcgcgctcacatgggcatgttcactgagctg
gccatcctctactccaaatacaaaccccagaggatgagggaacatctggagctcttctgg
tctcgagtcaacatccccaaggtgttacgagcggctgaacaggcccatctgtgggcggag
cttgtgttcctgtatgataaatatgaggagtttgacaacgccatcatgacgatgatgaca
caccccaccgacgcctggaaagacgcttccttcaaagagctcatcagcaaggtggcgaat
gtggagctctattataaatctctgcagttttatttggactacaaaccgctgctgctcaac
gatctgctgtctgttctcgctcctcgactcgatcacagtagagccgtcagctacttcagc
agggtaaatcagttgcggctggttaaaccgtatctcagatcagtgcagagccacaataac
agatctgtgaatgaagcgcttaacaaccttctgatggaggaagaggactatcagggtctg
cgtgcctccatcgacgcgtatgataacttcgactccatcggtttagctcagaggctggag
acacacgagctcatcgagttcagacgcatcgctgcgtatctctacaagagcaaccagcgc
tgggctcaaagcatccagctctgcaagaaagacaaactctacaaggacgcgatgcagttc
gctgccgagtctcaggacggcgctcaggctcaggatctcctgcgctggtttgttgaggag
gggaagcgtgagtgtttcgccgcgtgtctcttcagctcgtatgatcttttggctcctgac
gtggtcttagagctggcctggagacacggcctcgtggacttcgccatgccttacttcatt
caggtgatgagggagtacctgagcaaggtggatgagttatccagacaggtgaaggtggat
aaactgcaggaggcggaggacaagagagcggccgaagaccagactcctgaagcttcctcc
atcgtctacggacaacagctgatgttgagtggcagtcaaacacccgtcgctcctcaggcg
ggtttccccgcttacggatacgccgctcccgggttcgctcctccggcgtacggcttcaac
cttcagccttga
DBGET
integrated database retrieval system
