Labeo rohita (rohu): 127169756
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Entry
127169756 CDS
T09007
Symbol
smarcad1a
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127169756 (smarcad1a)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127169756 (smarcad1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
DEAD
CUE
HBS1_N
HHH_3
T2SSK
Motif
Other DBs
NCBI-GeneID:
127169756
NCBI-ProteinID:
XP_050973312
LinkDB
All DBs
Position
8:complement(16727866..16738181)
Genome browser
AA seq
975 aa
AA seq
DB search
MSFFNLDRFRFQRDNAVDSHRKSSDGSNSDKENQRAHQRKPDGRCASGKASKHVLEGVSS
DDKVVKMGKDTTSESKHQISKEMEDKIIKLMEMFPQKSKKDLLEVVESTSTLEGAIAHCL
MIYGDDNIVGWKSKGGHSEDDNDQPKKRRKVVRSDSESEEEEEEEDSEDEESQEPSRERQ
EALLKKMRKKLPDIEKEVLRDVLREHDWDYENALGSLLVFSSTDTSSPEDQRKQKSKSSH
SREKKEKSAQKPDSSSSLSRWLTAAPSPMPKVSSVSTPKTQKPAVSKITTKNGSFKRKRG
NESPLNDDSASEEEEEIDSDVESISDDMDSEDEDSISTNLQDKIIQFLQEASLDELALIS
GCSIKKAQKIISLRPFNTWKDVKEQFYKDNGLSIDLVHGCKVVLKERQVVRDLMGRCEKI
AQKMTKDVTQVIEAGMGSMKQPKVLNSNFKLQPYQLIGLKWLILLHQHKLSGILADEMGL
GKTIQAIAFLAHLYEKGIKGPHLITVPSSTLDNWVRELGLWCPSLKVLIYYGSVEDRRYL
RQDILSGVVDFNIIVSTYNLTIGNDHDRSLFRKLRLKYAVFDEGHMLKNMNSLRYRHLMA
INAEHRLLLTGTPLQNNLLELMSLLNFIMPSMFSSSTSQISKMFSTRSSEEESSFHKDRI
AQAKLIMKPFILRRVKSEVLKQLPPKVENIEMCPMSDAQQKLYDKLFKRLKKAPNGDKRE
LCNVMMQLRKMANHPLLHRQYYTSDKLAAMSKAMLKEPTHFDANPALIQEDMEVMSDFEL
HNLCQQYSSISSFQLEKKLLLDSGKFALLTKLLTRLKEKGDRVVLFSQFTMVLDIVEILL
KHLDHQFVRLDGSTPMAERIGLIDKYNTNPEIFVFLLSTRAGGQGINLASANTVILHDID
CNPFNDKQAEDRCHRMGQTRPVQVIKLISRDSIEACMLRVGQEKLKLEQDMTTDGDEEGV
MTEQMAELLKVSLGL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgagctttttcaacctagaccggtttcgtttccaaagggacaatgcagtcgacagtcac
cgtaaatcgtcggacggatccaactcggataaggagaatcaacgggcccatcaaagaaag
ccagatggtcgatgtgcatcaggcaaggcatcaaaacatgtattagagggtgtttcctct
gatgacaaagttgtcaagatgggcaaggatacaacatcagagtcgaagcaccagattagt
aaggaaatggaggacaaaatcatcaaactaatggagatgttccctcagaagagcaagaaa
gatctactggaggtagttgaaagcaccagcacactggaaggggctatagcgcattgtttg
atgatttatggagatgacaatatagtcggatggaaaagcaaagggggacatagtgaagat
gataacgatcagccaaagaaaaggagaaaagttgtgcggtcagattcagaatctgaggag
gaggaggaggaggaagattctgaggatgaggaaagtcaggagccaagcagagagaggcag
gaggctctgttgaagaagatgaggaaaaaactgcctgatattgaaaaagaggtgctgagg
gatgtcctgagagagcatgactgggactatgagaatgctttgggatcactgcttgtgttt
tcatcaacagatacaagttcaccagaagatcagagaaaacaaaagtcaaaatcctctcac
tccagggaaaaaaaggaaaaaagcgcacaaaagcctgacagctcgtctagcctgtctaga
tggctgacagcggcaccgtctcccatgccaaaagtctctagtgtgtctactccaaaaaca
caaaaaccagcagtcagcaaaatcaccaccaagaatggatcctttaagcggaagaggggc
aatgaatcgccattaaatgatgacagtgcctctgaggaagaagaggagattgacagtgat
gttgagagtatctctgatgatatggactcggaggatgaagacagcatctctacaaatctc
caggacaagatcattcagtttcttcaagaggcttccctagatgagctagctctaatatct
ggctgctcaatcaaaaaagcccagaagatcatttcgctgaggcctttcaacacttggaaa
gatgtgaaagagcagttctataaggataatggtctgtctatagatctggtacatggctgt
aaggtcgtgctcaaggagaggcaggtggttagagaccttatgggaagatgtgagaagatt
gcacagaaaatgactaaagatgttacccaggttatagaagcaggcatgggctccatgaag
cagcccaaagtcctgaacagcaattttaaactccaaccgtatcagctgattggcttaaag
tggctgattcttctgcaccaacacaagctaagtggcatcctggcagatgaaatggggctg
ggtaaaactattcaagccattgctttcctggctcatttgtatgaaaaaggaatcaagggc
cctcatcttattaccgtaccctcatccacactggataactgggttcgtgaactgggtctt
tggtgtcccagtcttaaagttcttatttattatgggtctgtggaagaccgcaggtacttg
cgacaagacatccttagtggtgtggttgatttcaacattatagtatccacttacaatctc
acaatagggaacgaccatgaccgcagtctattccgcaagctgaggctgaagtacgctgtg
tttgatgagggccacatgctgaaaaatatgaactctttacgctatcgccacctcatggcc
atcaatgctgagcacagattgctgctgactggaacacctttacagaacaacttgctggag
ctcatgtcccttttaaacttcatcatgccctccatgttctccagcagcacctcacagatc
tctaaaatgttctctacgaggtcatcagaggaagaaagcagttttcacaaggacagaatt
gcacaggccaaactgatcatgaagccattcattctgagacgagtcaagagtgaggtgttg
aaacagcttccgccaaaagtggagaatattgagatgtgtcccatgagtgacgcccagcag
aagctgtatgacaaactcttcaaaagactcaagaaggctccgaatggagacaagcgggag
ctttgcaatgtaatgatgcagctgagaaagatggctaatcatccgctgctgcaccgccag
tactacaccagtgacaaattggctgccatgagtaaagccatgcttaaggagccgacacat
tttgatgccaaccctgcactgatccaggaggacatggaggtgatgtctgattttgagctg
cataatttatgtcagcagtacagctccattagcagttttcaactggaaaaaaaactcctc
ttagactctgggaagtttgcacttttaaccaaattactcaccaggctcaaagaaaagggc
gatagggttgtccttttcagtcagttcactatggtgctggacattgtggagattctgctc
aaacaccttgaccatcagtttgttcgactggatggttctactcccatggcagagaggatt
ggtctcatcgacaaatacaatacaaatcctgagatctttgtgttcctcctgtcgacccgg
gctggtgggcagggaatcaaccttgcgtctgcaaacacagtgattctgcatgacattgat
tgcaatccattcaatgataaacaagcagaggaccgctgtcatcgaatggggcaaaccaga
ccagtgcaggtaatcaagctcatcagcagagattcgattgaggcctgcatgctccgcgtg
ggacaggagaagcttaaactggaacaggacatgaccactgatggagacgaggaaggtgtt
atgactgaacaaatggcagagctgctcaaagtctcactgggcctttga
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