Labeo rohita (rohu): 127169845
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Entry
127169845 CDS
T09007
Symbol
si:ch73-61d6.3
Name
(RefSeq) LOW QUALITY PROTEIN: occludin
KO
K06088
occludin
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03272
Virion - Hepatitis viruses
lroh04514
Cell adhesion molecules
lroh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
127169845 (si:ch73-61d6.3)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127169845 (si:ch73-61d6.3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
127169845 (si:ch73-61d6.3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lroh01009
]
127169845 (si:ch73-61d6.3)
Protein phosphatases and associated proteins [BR:
lroh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127169845 (si:ch73-61d6.3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
Spectrin_Anc-1
DASH_Dad1
DASH_Dad2
T3SchapCesA
MapZ_EC1
FapA
Keratin_2_head
Motif
Other DBs
NCBI-GeneID:
127169845
NCBI-ProteinID:
XP_050973448
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Position
8:27698406..27711642
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AA seq
532 aa
AA seq
DB search
MFEKQPYDSPPMYTPPSNGFGPPGSFQDPRSEFDPYPAPPGSYYVGEEVPQHFYKWLSPP
GIVKIMIGIVIILCLGIFACVASTLVWDMQYGYGYGSGFSGYPGYGSGYGYGNSYGYGSG
YGGGYGYGGYYNSYPTPYSAKTTMIAVAAINFIVALGFFAASFSKTNTFRSRKFYLAVLV
VCSIMAVIQGIINIVYIVGVNPMAQSSTSSYYNPMLLMCQNLYGSSVTGMGAGFPLYNQY
LYHYCYVDPQEAVAMVCGFLVVAALAVAAFFSYKTRSRIWQYGKPNIYWDRPLMAGPEGR
DVEEWVNHVQDGQSVQEASMVFSEKMAPVLASAPSVGSIPLKTGSVLSSETHNVIGYPER
SFSRPSHSTLLSGEVSSSPSDQTDTIRKPSASRSKRRRRNPELDESQYETEYTTGGETAN
DFDEDFWTRLYPEITSDTQRHEYKKEFDSDLRTYKELCAEMDDINDQINKLSRELDTLEE
GTSKYEAVAEEYNRLKDVKRMPDYQNKKHQCRKLRHKLFHIKRMVKVYDRRQ
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaaacaaccctacgatagtccccccatgtacaccccgccttccaatggcttt
ggaccgccggggagcttccaagacccacggagtgaattcgatccttaccctgcacctcca
ggatcctactatgtgggtgaggaggtaccacagcatttctacaaatggttgtcccctcct
ggaattgtgaagattatgataggaatcgttataatcctctgtctgggaatcttcgcctgt
gtggcctcgactctggtttgggacatgcagtacggatatggttacggatctggattttcc
ggctatcctggatacggaagtggatacggatacgggaacagctatggatacggaagtgga
tacggaggtggatacggatacggaggctactacaattcttacccgaccccttactcggcg
aagactaccatgatcgccgtcgccgccataaacttcatcgtcgctttgggattcttcgcc
gcctccttctccaaaacaaacacgttccgcagcaggaagttctacctggcggtgcttgtt
gtctgttctataatggccgtgattcagggcattataaacattgtgtacattgtaggagtg
aaccctatggcccaaagctccaccagctcatactacaatcccatgcttctgatgtgtcag
aacctctatggcagcagtgtgacaggaatgggggctggatttcccctttataaccagtac
ttgtaccactactgctacgtggaccctcaagaggcagttgcaatggtttgtgggttcttg
gttgtggcggcactggctgtggcagctttcttctcctataagactagaagtagaatctgg
cagtatgggaaaccaaacatctactgggatcgaccactaatggcaggacctgagggcaga
gatgtggaggagtgggtcaaccatgtacaggatggacagagcgtgcaggaagcatccatg
gtgttttcagagaagatggctcctgttctggcttcggcccccagtgttggctccatcccc
ctaaagactggcagtgtcttaagctctgagacccacaatgttatcggttaccctgagcgc
tctttcagccggccatctcactccacattgctgtctggagaagtgagctccagcccctct
gaccagacagacaccatccgcaaaccatctgcctccaggagcaagagacgcaggaggaac
cctgagctggacgagtcccagtacgaaaccgagtacacaacaggaggagagactgccaat
gattttgatgaggatttttggacacgcctgtatccagagatcacatccgacacccagcga
cacgaatataagaaagagtttgactctgacctcaggacctacaaggaactgtgtgccgaa
atggatgacatcaacgatcagataaacaagctcagcagggagctagacacacttgaagag
ggcacgtccaagtacgaggctgtagcagaggaatataatcgtctgaaagacgtaaaacgg
atgccagattatcaaaacaagaagcaccaatgtcgcaaactgcgccacaagctcttccat
attaaacgaatggttaaggtctacgaccggcgtcagtaa
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