Labeo rohita (rohu): 127169939
Help
Entry
127169939 CDS
T09007
Symbol
snrpd3
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3
KO
K11088
small nuclear ribonucleoprotein D3
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127169939 (snrpd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127169939 (snrpd3)
03041 Spliceosome [BR:
lroh03041
]
127169939 (snrpd3)
03032 DNA replication proteins [BR:
lroh03032
]
127169939 (snrpd3)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
127169939 (snrpd3)
Spliceosome [BR:
lroh03041
]
Complex A
U1 snRNP components
Sm proteins
127169939 (snrpd3)
U2 snRNP components
127169939 (snrpd3)
Complex B
U1 snRNP components
127169939 (snrpd3)
U4/U6.U5 tri-snRNP components
127169939 (snrpd3)
Complex C
U2 snRNP components
127169939 (snrpd3)
DNA replication proteins [BR:
lroh03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
127169939 (snrpd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
ATP-grasp_2
Kringle
Motif
Other DBs
NCBI-GeneID:
127169939
NCBI-ProteinID:
XP_050973584
LinkDB
All DBs
Position
8:complement(15922893..15924119)
Genome browser
AA seq
127 aa
AA seq
DB search
MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMANITVTYRDGRVSQLEQ
VYIRGSKIRFLILPDMLKNAPMLKSMKNKNQAAGAGRGKAAILKAQVAARGRGRGGPGRG
NVFQKRR
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgtctattggagtgcccatcaaagttcttcatgaagcagagggacacatagtcacctgt
gaaaccaacactggggaggtttacaggggcaaactgatcgaggctgaggacaacatgaac
tgccagatggcaaacatcacagtcacatacagggatggccgtgtatctcagctggagcag
gtgtatattcgtggcagtaagatcaggttcctcatccttcccgacatgctgaaaaatgct
cctatgttaaagagtatgaagaacaaaaaccaggctgctggtgcaggtcgaggaaaagca
gctattcttaaagcacaagtggctgccagaggccgtggccggggtggaccaggacgaggg
aatgtattccagaagaggcgctag
DBGET
integrated database retrieval system
