Labeo rohita (rohu): 127169977
Help
Entry
127169977 CDS
T09007
Symbol
dmxl1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
127169977 (dmxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127169977 (dmxl1)
Membrane trafficking [BR:
lroh04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
127169977 (dmxl1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
127169977 (dmxl1)
RAVE complex
127169977 (dmxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_SPT8
VPS11_N
Beta-prop_IP5PC_F
DUF1081
Motif
Other DBs
NCBI-GeneID:
127169977
NCBI-ProteinID:
XP_050973654
LinkDB
All DBs
Position
8:30706566..30755659
Genome browser
AA seq
2938 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSVNNQPFTAYASGCDIVILGSDFERIQIIPGAKHGNIQV
GCVDCSLQGGQIAASYGNIVCMFEPVEVSPQGKAQNQKLNYHWQKSGQFVLQSVAHILTW
HPTGSYLLTGSACLQMWCDFQSSTETGEEAETAGPQRSWRCVWQCKSAAPTHFIKFSPDG
EFFATAGQDDCLVKVWYSTSKWQADITKLFTPLDVRSGAEINFSFIYLAHPRSVTGFSWR
KTSKYMPSGTVCNVLLTCCKDSVCRLWAETLLPSDCLLSGLRHNYSSNDMKANNMKKSSS
NMRAQNQNPMELKLKPSWREEVRCLSQLSYTGPLPQQQNKHYAHRTNMLHANALCHFHIA
ASINPATDIPLLPSISSMNGSDEEEPGGPFTVHWLNNKELHLTLSMEVFLQQLRSSGEQN
GPTERYDADEEGSAADAAAPSSIALPAAAVDHQVDVLLGDWNRAADMLFSIHPMDGSLLV
WHVDWLDEYQPGMFRQAQVSFVSRIPVAFPTGDANSLSRSVVMYACNRNVDLAIQHGRQR
PAGLPHSSSALIGLSHNKPTSNSLRLSIFTPSVLMISKHADGSLNQWAVSFAEDSAFSTV
LSVSHKSRYCGHRFHLNDLACHSLLPLLLTTSHHNALRTPDGEAALTRPTAAPSRRSRVS
SGGVSQDPNAIYSELILWRVDPVGPLSFSGGVSELARINSLHASAFSNVAWLPALIPSNC
LGVYGNSPSACFIASDGHSLRLYQAIIEAKKLLSELSNPDISKYVGEVFNIISQQSTARP
GCIIELDAITDFQGKETQLLHVFEEDLILGNEKIDDYLQDSVPSRTLFSARFFLVVMEIT
QSGRSLLHMWHLQLDAVPAIMGQTPDRENVAPSPLNNSQFNFETVGSPQTPRPKLNTSNL
QSACRLTLTNTKVFSQELDLPQGVEVLRVSPAAGHLSASSLQPAGQAPYLLATSCSDGSV
RFWRCSAVTDPDGSAAPSYVWEEWPLLVEEGVASSSALSVSGQLMGLSCCHTSRVAVAHR
SDVMTAIEPLMHVSIFQCDSTGGSQWILEQTLKVCGSYSPSANDCDRSLNNDCLFVGSKK
QVHLDWVSREDGSHTLTVGLGSKLYMYGMLSGKPPDLGLSDSSREHRSSRMVLLRVVDLV
SSVEGSPPIPVSLSWVRDGILVVGMDCEMHVYSQWQPPAPIKPTLGGSVTSLNSVVKQDG
LSLNPSKKTLTRSMTSLAQKLSGKRTVYDLPAEMEDSGLFEAAYNLFPTLPQYHPVQLLE
LMDLGKVRRAKAILSHLVKCIAGEIVSMKDTTINQERRLRSLTISASGSTSRDPKMFSKA
ESSDYTEIDSIPPLPLYALIAADEETAPSAKERTESVSTHGARTSSQTDAYDELFQTTGV
STDDLDPFDGDEEDANAKVIDLSKYSPTFFGSEHAQVLSGHLLHSSLPGLTRMEQMSLMA
LADTIASTSTDIGESQGKGQGGETLDECGLRFLLAVRLHTFLLTSLPPAHRAQLLCQGLS
TCHYAWAFHSEAEEELLNMLPTLQKGEPTWPELRAMGVGWWLRSTNKLRRCIEKVAKAAY
QRNNDPLDAALFYLAMKKKAVVWGLYRSHQNVKMTAFFSNNFSEDRWRKAALKNAFSLLG
KQRFQHSAAFFLLAGSLKDAVEVCIEKMQDLQLALVVCRLYESEFEMSCTYKRILQRHVL
GQDHQIAGHQDPFLRSMAYWVLDDYSKALDTLLEPNIDTSHEGSAGSSPCSPDVFNFYTY
LRTHPLLLRRHFGSSDKAKVGLTAEGRAVDSISLTERRLFFTAAYAHLQAGCPMLALEVL
SKMPKVVKRSKPCENPSASLSEHKDQASALDWSQPVLNGLESVSSLSSPREDSQSDSVLS
FDWSQPSVTLQDEPLELKWDSDKDESDEEESGLAMKTIHPEKDGGAPEVTSTPSDYVEDD
SPALTEDILAAQLKFSSCLKILTTELRTLSTGYELDGGKLRHQLCHWLERAVAALQRCCG
YNPFLQHLPEGISADLSQVEDLEEQGAAEQARELQHRRRLWLKRNQPLLRIFLSYCSLHG
SHGGGLASVRMELILLLQESQQDGGLQISAPASQHLSVPLFLAWTASSKTVVANPIVHLT
NLTHDILHTINALDAPPHPDIVNNEIYVMHTLAASLSACIYQCLCDGHSYSHVNPFTGIT
YQSVLLTHQPPVRSVSMEEAVLPNTSPAQWPGVSVLMRLLSASGEENQPGLPVVLCEILT
AVFLSLFVHGLATHSTHELFRIVAHPLNSKLWVAVFGGGARVHVPEKPSSPTVEDVERKQ
RRFHLRSSRSNSREVPDSPLSPRPMAMEPESSVCKERFVPPELSIWDYFIAKPYLPSSVS
RVEYDSEESQGSEDEEEDDDDDEDDGDSFDPNSPLAEHSNNNSYSWCLMRLAMVQTVLFN
LKTFYPMAGHDLLDLPVCSPLCHAALKTLQRWEQLLLKRLEIFGGPPSKFICTQLLDESV
LSGPALLRHKALFEPSNTPFRSRRRSALPVKRLWQYLVKQEEVQETFIRNIFTKKRDQNE
ETDSVKCSVPPESTHNQIEADLGFPGGKARIIHKESDIITAFAINKANRNCLVVASTHDI
QELDVSSILATQILTWVDDENETEVKGTDDFLVVHAREDFTTLHGTTPYTHSSPGTPINM
PWLGGVQTGRGAAVLIKRNINNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQITCFRS
PGNSRVTRIRFNYQGNKFGIVDADGALSLWQTSTSGNTPKPYLTLQCHNKTANDFVFVGS
SSLIATAGLSTDNRNVCLWDTLVTPAYSLVHAFSCHESGSTVLALASKQQLLISGGRKGW
ISVLDLSMKIQRQSFQAHDSPVKALAVDSTESCFISGSAEGNIKVWSMSTQSLLHTFSNE
HARQSLFRNLGTGVMQIETGPANHVFSCGADGTMKMRVLPDALSLYCSGVKNDVKFIM
NT seq
8817 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaccaggtgctcacgggggccgtcaatcccggagacaactgcttctctgtg
ggcagtgtcaacaaccagcccttcacggcgtacgcctctggctgtgatattgtcattctg
ggaagtgactttgaaaggatccagatcatcccgggagccaaacatggtaacattcaggtg
ggctgcgtggactgctcactgcagggtggacagatcgctgcgtcgtatggaaacattgtt
tgtatgtttgagccggtggaggtcagtccgcaagggaaagcacaaaaccagaagctgaat
tatcattggcagaagagcgggcagtttgttctgcagtcggtcgcacacatcctgacatgg
caccccaccggttcatatctcctgacgggctcggcgtgtctgcagatgtggtgtgatttt
cagtccagcacagagaccggagaagaggccgaaacagctggtcctcagcgctcctggaga
tgcgtatggcaatgcaaatctgcggctcccactcacttcatcaagttttccccggatgga
gagttttttgcgaccgcaggacaggacgactgtctggtgaaggtgtggtacagcaccagt
aaatggcaggcggacatcaccaaactcttcacgccgctggacgtgcgctcaggagccgag
atcaacttctccttcatttacctggctcaccctcgatccgtcactggcttctcctggagg
aagaccagcaaatacatgcccagtggcaccgtgtgtaatgtcctgctgacctgctgcaag
gacagcgtgtgtcgcctatgggccgaaacactgttgcccagtgactgtctgctgtctgga
ctcagacacaattacagcagcaacgatatgaaggctaacaacatgaagaaatcctccagc
aacatgcgagcgcagaaccagaacccgatggagctgaagctgaagccgtcgtggagagag
gaggtgcgctgtttatctcagctctcatataccggtcctctgccccagcagcagaacaaa
cactatgcccaccgaaccaacatgctgcacgccaacgcactgtgccactttcacatcgcc
gccagcattaacccagccacagacatccctctgctgccctccatctcatccatgaacggc
tctgatgaggaggaaccgggcggccccttcaccgttcactggctcaacaacaaagagctg
cacctgacgctgagtatggaggtgtttctacagcagctgaggagcagcggcgagcagaac
ggacccacagagcgctacgatgctgatgaggaggggagcgctgctgatgctgcggctccg
agctccattgctctccctgcggcggctgtggatcatcaggtggacgtgctgctgggtgac
tggaaccgagcggcagacatgctgttcagcatccaccccatggacggatcactgctggtg
tggcacgtcgactggctggacgagtaccagcccggcatgttccgacaggcacaggtttcc
ttcgtgtccaggattcccgtggccttccccaccggtgacgccaactcactcagccgcagt
gtggttatgtatgcctgcaacagaaacgtggacctggccatccagcatggccgtcagcgt
cctgcgggcctcccgcactcgtcctccgctctgatcggcctgagtcacaacaaacccacc
tccaacagcctgcgtctcagcatcttcacccccagcgtcctgatgatctccaaacacgcc
gacggctcgctcaaccagtgggccgtcagcttcgctgaggactcagccttctccacggtg
ctcagcgtctctcacaagtcacgatactgcggccaccgcttccacctcaacgatctggcc
tgccactcgctgctgccactgctgctcaccacctcgcaccacaacgccctgaggacacct
gacggggaggccgctctgacccggcccaccgctgcaccgtcccgcaggagcagagtgtca
tccggcggtgtctcacaggatcccaacgccatctacagcgagctgatcctgtggcgggtg
gatccggtgggtccgctgtcgttctcaggcggcgtgtcggagctggccaggatcaactcg
ctgcatgcatctgccttctctaacgtggcctggttacccgcgctcatccccagcaactgc
ctcggtgtgtatggaaactcacccagtgcctgcttcatcgccagtgacggacactcgctc
cggctctatcaggccattatcgaggccaaaaagctgctgagtgaactctccaaccctgac
atctccaaatatgtcggagaggtgtttaacatcatcagccagcagtcgacggccagacca
ggatgcatcattgagcttgatgccatcacagactttcaggggaaagagacgcagctgttg
cacgtgtttgaagaggacctgatcttgggaaacgagaaaatagacgattaccttcaggat
tctgttcccagccggacgctcttctccgctcgcttcttcctggtggtgatggagatcact
cagagcggcaggtcactcctgcacatgtggcatctacagctggacgcagttcctgccatt
atggggcaaactccagacagagagaatgtggctccatcacctttgaacaactcacagttt
aactttgagacggtcggctcaccacaaaccccgagacccaaactaaacacgtccaacctc
cagagcgcctgccgcctcactctgaccaacaccaaagtcttcagccaggagctcgatctg
ccacagggtgtggaagtcttgcgtgtatcacctgctgcaggtcatttgagcgcttcatct
ctgcagccggccggccaggctccgtatctgctggccacgtcctgctcagacggatccgtc
aggttctggaggtgcagcgccgtcactgaccccgatggctctgctgccccgtcatacgtc
tgggaggagtggcctctgctggtggaggagggcgtggccagcagcagcgctctgagtgtg
tccggtcagctcatgggtctcagctgctgccacaccagcagagttgcagtagcgcacagg
agcgacgtaatgaccgccattgagccgcttatgcatgtcagcatattccagtgcgactct
actggaggatctcagtggatactagagcagacgcttaaagtctgcggctcctacagcccg
agtgcgaacgactgtgataggagcctgaataacgattgtttatttgtcggcagtaagaag
caggtgcacttagattgggtttccagagaagacggttctcatacattaactgtgggtctg
ggatccaaactttacatgtacgggatgctttcaggaaaacctccagatctgggactgtcc
gatagcagtagggagcaccgcagctcccgcatggtgctcctgcgagtggtggatctggtg
tcatcggttgaaggttcgccacccattcctgtctctctgtcttgggtgcgagatggcatc
ttagtagtcgggatggactgcgagatgcatgtctactctcaatggcagccgccggctccg
atcaaaccgacacttggcggtagcgtgacgtcgctcaactctgtggtgaaacaggatgga
cttagtctgaatccttctaaaaagaccctcaccagatccatgactagtttggctcagaaa
ctcagtggaaagagaacagtgtacgacctcccggctgagatggaggattctgggttgttt
gaggcggcgtataaccttttcccgactttgccgcagtatcatccggtgcagctgctggag
cttatggacctcgggaaggtgcgacgggccaaagctatcctgtcccatctggtgaaatgc
attgctggggaaatcgtgtctatgaaggacactacgattaaccaggagcgccgtctgcgc
tcactcaccatcagcgccagcggaagcacctccagagacccgaagatgttcagcaaggct
gaaagctcggactacaccgagatcgactcaatcccgccgctgcctttgtatgcgctgata
gccgccgacgaggaaacggctcctagtgccaaagaaagaacagagagcgtgagcacccac
ggtgcccgtacatccagccaaacggatgcttatgacgagctcttccagaccactggcgtc
agtacagatgacttggatccttttgacggagacgaggaggacgctaatgctaaagtcatc
gatctgtcaaagtacagccccacgtttttcggctctgagcacgcacaggtgttatcggga
cacctgcttcactctagcttaccggggcttacgcgcatggagcagatgtctctgatggcc
ttagcggacaccatcgcttccaccagcactgacattggagaaagccaagggaaaggacaa
ggtggagagacactggatgaatgtgggctaaggtttctcctggccgttcgtctgcacacc
ttcctcctcacgtctctacctccagctcatcgagctcagctcctctgtcaaggattgtcc
acctgccactacgcctgggcgttccactccgaggctgaagaggagctgctcaacatgctt
ccaaccctgcagaaaggagagcctacatggccggagctgagagccatgggagtgggctgg
tggcttaggagcaccaataagcttcgcagatgtattgagaaggtagcaaaagctgcttat
cagagaaacaacgacccgttagatgcagccttgttttatctggccatgaagaagaaagct
gtggtctggggactctacaggtcccaccagaacgtgaagatgacggcgttcttcagcaat
aacttcagtgaagaccgctggaggaaggcagcactgaagaacgcattctctctgctcgga
aagcaacgttttcagcattcagcggctttctttctgctggctggatccctgaaagatgct
gttgaggtttgtatagagaagatgcaggatcttcagctggctctggtggtctgtcggctg
tacgagtctgagtttgagatgtcctgcacctacaagcggatcctgcagaggcacgtgttg
ggtcaggaccaccagatcgcgggccatcaggaccctttcttacgcagcatggcgtactgg
gtgttagatgactacagcaaggctttggacacactgctcgagcccaatatagacacgtca
catgaaggaagcgccggatcgtctccctgtagtcctgatgtttttaacttctacacctac
ctccgcacgcacccgctgctgcttcgccgtcacttcggctcctctgataaagctaaagtg
ggtctgaccgctgaaggacgtgccgtcgattccatcagcctcacggagcggagactcttc
ttcaccgccgcttacgctcacttacaggctggctgtcccatgctggctttagaagtgctc
tccaaaatgccaaaggtggtaaagcgctcgaagccatgcgagaatccgtccgcgtcgttg
agcgagcacaaggaccaggcctcggctctggactggtctcagccggttctcaacggtttg
gagtctgtgtcctcgctctcgtctcctagagaggacagtcagtcggattcggtgctcagt
tttgactggagtcagccgtccgtcaccttgcaggacgagcctctggagctcaagtgggac
agcgacaaagacgaatcggacgaagaagaatcaggcctggcgatgaagaccatccatccg
gagaaagacggcggagctccagaagtgacgtccaccccctcggattacgttgaagatgat
tcacccgccctgaccgaggacatcctcgccgcccagctgaagttcagctcctgcctgaag
atcctcaccactgagttacggacgctctccacgggctacgagctggacggaggaaagctg
cgccatcagttgtgccactggctggagcgtgccgtggcggcactgcagagatgctgcgga
tacaacccctttctccagcacctgcctgaaggcatctcggccgacctgagccaggtggag
gatctggaggagcagggtgcggcggagcaggccagagagctgcagcaccggcgcaggctg
tggctgaagaggaaccagcctttgctgcgcatctttctgagttactgcagcctgcacgga
tctcacggaggaggactggcctctgtcaggatggagctcattctgctgctgcaggagtct
cagcaggatggtggtctgcagatctccgctcccgcttcgcagcacctgtcagttcctctt
ttcctggcgtggaccgccagctccaaaacggtagtggccaatcccatagtgcacctgacc
aacctcacgcacgacatactgcacaccatcaatgctctggatgcgcctccgcaccccgat
atcgtcaacaacgagatctatgtgatgcacacgctggcagcctctctctccgcctgcatc
tatcagtgtctctgtgacggacacagttacagccatgtgaatccgttcacgggcatcacc
taccagagcgtcctgcttacccatcagcccccggtgaggagcgtcagcatggaggaggcc
gtcctgcccaacacctctcccgcgcagtggcctggtgtgagcgtcttgatgcggctgctg
agcgcgtccggagaggagaatcagccgggcctgcctgtggttctttgtgagatcctgact
gctgtcttcctcagcctgttcgtccacggtctggccactcactccacccacgagctcttc
cgcatcgtcgctcacccgctcaacagcaagctgtgggtggctgtgttcggcggtggagcg
cgtgttcatgtgccagagaaacccagctcacccacagtggaggatgtggagcggaagcag
cggcgtttccatctgcgctcatcacgcagtaactccagagaggttcccgacagtccgctc
agtcccagacccatggcgatggagccggaatcatccgtctgtaaagagcgtttcgtgccg
cctgagcttagcatctgggattattttatcgcgaagccgtacctgccttcgtctgtcagc
cgagtggagtacgactctgaggagagccagggcagtgaggacgaggaggaggatgatgat
gatgatgaggatgatggagattcctttgatcccaactctccgctagcagaacattccaac
aataactcgtacagctggtgtctgatgcgtttggccatggtgcagacggtgctcttcaac
ctcaagaccttctacccaatggcaggtcacgatctcttagatctgcccgtgtgttcgccg
ctctgtcatgccgctctcaagacgcttcagcgatgggagcagctgttgctcaaaaggctg
gagattttcggaggtcctccgtcaaagttcatctgcacgcagctgctggatgagagcgtg
ctgtcgggtccggctctgctaaggcacaaggccctgtttgagccctccaacacacccttc
aggtctcggcgacgctctgctctgcccgtcaaacgactgtggcagtatctggtcaaacag
gaagaggttcaggagacgttcatacgcaacatcttcaccaagaaacgagatcagaacgag
gagactgacagtgtgaaatgttctgtgcctccggagtccacacacaaccagattgaagct
gatctggggtttcctggtggaaaagctcgtatcatccataaggagtctgacatcatcacg
gcgttcgccatcaataaggccaatcgcaactgtttagtggtcgcctcaacccacgacatc
caggagctggacgtgtcttctatcctcgccacgcagatccttacctgggtcgatgacgag
aacgagacagaggtcaaagggacggatgatttcctggtggttcacgcacgggaagacttc
accacgctgcacggcaccacgccctacacccacagtagccccgggacgcccatcaacatg
ccctggctgggcggtgtgcagacgggcagaggagccgccgtgctcatcaaacgcaacatc
aacaacgtgaggcggatgacgtcacaccccacactcccctactatctgaccggagctcaa
gatggtagtgtgcggatgtttgaatggggtcactcacagcagatcacctgcttcaggagc
cccggaaactccagggtcaccaggatacgcttcaactatcagggcaataagtttgggatc
gtggatgcagacggagcactcagtctctggcagaccagcacctcaggaaacactcccaaa
ccctacctgacgcttcagtgtcacaataagacggcgaatgactttgtgtttgtgggctcg
tcatctctcatcgccaccgcaggcctgtccacagacaacaggaacgtgtgtctatgggat
acgctggtcacgccagcatacagtctggtacatgccttcagctgccacgagtccggctcc
acggttctggctctggcgtccaaacagcagctgctgatcagcggaggccggaagggctgg
atcagcgtcctggacctcagtatgaagatccagcgccagagtttccaggcgcacgactcg
cccgtcaaagcgctggctgtcgactccaccgagagctgcttcatcagcggctcggcggag
ggaaacatcaaggtgtggagcatgtccacccagagccttctgcacaccttcagcaacgaa
cacgcccgccagtcactcttccgcaacctcggcaccggcgtcatgcagatcgagacgggt
ccggccaatcacgtcttctcctgcggggccgacggcaccatgaagatgcgtgttctgccg
gacgccctgagcctctactgcagcggcgtcaagaatgacgtcaagtttatcatgtag
DBGET
integrated database retrieval system
