Labeo rohita (rohu): 127170003
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Entry
127170003 CDS
T09007
Name
(RefSeq) FERM and PDZ domain-containing protein 1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
127170003
Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
Other domain-containing proteins
FERM domain-containing proteins
127170003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FERM_M
PDZ
RA_2
PDZ_6
FERM_C_FAK1
PDZ_2
FERM_f0
SNX17-31_F2_FERM
Motif
Other DBs
NCBI-GeneID:
127170003
NCBI-ProteinID:
XP_050973683
LinkDB
All DBs
Position
1:35150283..35179808
Genome browser
AA seq
1757 aa
AA seq
DB search
MEERDRSRSPSRRTSRVEQVVGRWLRRSRESLSRERVIDGQVADNGSQEQRSCPIRVTVK
IPLDPTLNSHGFTVSTHTPPQVLDVTEGGPADGKLVPGDQLFKINNVAVDDLSTEQAADI
IRECQNTITLTVLRNTVGPKSSFITPEKRAKLKSNPVKVRFAEEVVVNGHSQGNSLLFLP
NVLKVYLENGQTKAFKFESKTTVKDIVMTLKEKLSISHIEHFSLVLEQQYSISKLYLLHE
EEIIQKVVEKRETHDYRCLFRVCFLPRDFKSMLKEDPVAFEYLYLQSVSDVLQERFAVEM
KCNTALRLAALHVQEKLASSGQSLKTPLKAIMKEWGIESFVSHTLLRNMREKDLKKAISY
HMKKILNQEPKQKVISVDQARLSYLNEMSELKSYGGKAFSATMMLQDRESTVSLLVGAQY
GLSQVINHKLSIMTTITEFSCITRVELLPESDRVSLVKIYLQDIKPITLLMESVAAKDLS
CLVAGYCKLLVDPQICVFPWSPNSKSHRISAEEGYVSHCGSDSDDSDTDVDALLAHVAST
AKSNDAADKPSDKLPEEPEKAQSYMKKNEEVEKEGGKEEEVVEKKEKEEFKENIHESIHG
DNGETAERDNERVGTEKEDKEQEKKPEHPQCVIIVDDPSSEASDSYQTESHFMTSMSSDS
IDALEEDDLMTYFSTRRPCHLPVKDSYCCEDRYSPSLSPRQLHSKDSHSQSDLCSTDSHC
EPDIDQFFCFPALSNIAECLPSPPAASEEEDCEELGIENEKHENGSPEECPGSTVPPPGD
YVFTFEQGDTRHYYNICSNVTPDSARSLPRPLSPPGPMEVQPDQEREEVNQTDTVPIFQP
PPGFGDSSSDDEFFDAQERFTSPEEPFSTAMTENSAESSTILRTVSLREIGICASEQEAE
DLQKKEKEQRKMVSQAESSDFNKRSKKRRSFMETNYTSLVSFPEEDHLGNSYGNCIPNYG
AISVNQGAGRMACFDGGCSDQGPCPTVLCLTDSEGEPAQLDFKPINPSKVNGSGPHNPTD
THSNKAYQRKQQLIEMEPDSMEFKSVTELMSTVSPAIVAVRSHVDLQDKENTSNHSRDDQ
EEGAVGGLVERLFGGHLFFDVSRGQYESRDDQVSKQMEDHFQDSSVTQKSSSLPKLGQVS
PLSLPYFHVPSISYTTSSELNRDDDMVHLQFGMGEHSVQPKERTRSQSLSTSFDNGTSHC
LTKHLFSEHFREPESEETDDICDPSLRELSSSLPSYEPSQRFLLTPCSSGILGRLSASTL
RGKIQNLPLYLSRSQEMLNAISNGSGNAKPARRLSETQLQKNEVEVAKEATEDVTLNAGS
PEVTEVKVVTIVSEEVTEVIEEVREVSHITPKTCGLQKTKSEPKDFSVKAISPLFSKSDN
SFQVSPSSVVVTTQNLNGPWGLVTSSGLQGCSHSPSSTSPHNLISSCGVFANCQSKPTLT
QPQSLPSSKLHEKPNLSCSSVLAMGCDTVMEGAQTPLETCHTVYTNCFSGVLDSASFDDE
LTVYEFSRRTSQGEPGDAVLTSVPPSSLSASPASFSPSSPLPSFPHLVLPASSSTELSTL
LFPLDAPDCFLSDPHEDIITSLLTRRYPLPPTGFLSLQRDVDTLLSVLAGAMKNEDGVHE
HPRDTCVAHFSENKRRLHVEARGLLAGCQRVVRVGQTPEETLQSLSESFRSLVQLTSVCL
CFSSCQRCRERHAQALTGLASVAKTYQDFARAAELVGSAPERKTCHDLSIKLLARQCTAL
TTSVFCLTQLFRTLTAL
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcgggaccgcagtcgctcaccgtctcgcaggaccagcagagtagagcaggtg
gtgggacgctggcttcgccgctccagagagtccctcagccgagagcgtgtgatagatggg
caagttgccgataatggctcccaggagcagagaagctgtccaattagagtcactgttaag
atcccacttgaccccacccttaactcccatggctttacggtctcaacacacactccaccc
caggtgctggacgtgacagaaggtggccctgctgatggaaagcttgtccctggtgaccag
cttttcaaaataaacaatgttgccgttgatgatctttctacagagcaggctgctgacatc
atcagggaatgtcagaacaccataacactaactgtcctgagaaatactgtggggccaaag
tcatccttcataactccagagaagagagccaagctaaagtcaaacccggttaaagtgagg
tttgcagaggaagtggtggtcaatggtcactcacaggggaactctctgctgttcctgccc
aatgttctgaaggtctatctggagaatggccaaacaaaggctttcaagtttgaatctaaa
accactgttaaggacatagtaatgactttgaaggagaaactctcaatcagtcatatcgag
cacttctctttggtgctggaacagcagtacagcatcagcaaactatatctactgcatgaa
gaagagattattcaaaaggtggttgaaaagagggagactcacgactacaggtgtctgttc
cgtgtctgctttctacctagagactttaagagcatgctcaaagaagatcctgtggccttt
gagtatctatacttacagagtgtgagtgatgtattgcaggaaaggtttgcagtggagatg
aaatgtaatacagctctccgactggctgctctacatgtacaggaaaaactagccagcagt
ggacaatcccttaaaacaccactgaaggccatcatgaaggagtggggtattgaaagcttt
gtgtcccacaccttactgcgaaacatgagagagaaggacttgaagaaagccatcagttac
cacatgaaaaagattttgaatcaggagcccaagcaaaaggtgatctcagtggatcaagct
agactgagctacttgaatgagatgtctgaactcaagtcctatggaggaaaggcttttagt
gccactatgatgctccaggacagagagtcaacagtgagtttgttggtgggagctcagtat
gggctgagtcaggtgatcaaccataagctgagcatcatgaccacaataactgaattcagc
tgcattaccagagtggaactattacctgagtctgacagagttagtctggtcaagatctac
ctgcaggatataaagccaataaccttgctgatggagtcagtggcagctaaagatttatca
tgtctggttgctggatactgcaaactgcttgtggacccccagatctgtgtgttcccctgg
tcacctaattcaaagagccaccgcatatcagcagaggagggttatgtgtcacactgtggc
agtgactctgatgactcagacacagacgtggatgctctccttgctcatgttgctagcact
gccaaaagcaacgacgcagcagataaacccagtgataagctaccagaagaaccggaaaaa
gcacaaagttacatgaaaaaaaatgaagaggtggagaaggaaggaggcaaagaagaggag
gtggttgagaagaaggaaaaggaggagttcaaagaaaacatccatgaatctatacatggt
gataatggagagacagcagaaagagacaacgagagagtgggcacggaaaaggaagacaaa
gagcaagagaaaaagccagaacatcctcagtgtgtcatcattgtggatgacccatcatct
gaagcgtctgattcataccaaactgagtcacatttcatgaccagcatgtctagtgactct
atagatgccctagaagaggatgacctcatgacctacttttctaccagacgcccatgccat
ttaccagtgaaagactcttactgctgtgaagatcgctattcaccatcattgtctccacgg
caactgcacagcaaagattctcattcccaaagtgacctgtgctctactgattcccattgc
gagcctgatattgaccaattcttttgctttcctgcactctcaaatattgctgaatgtcta
cctagtccccctgcagccagtgaagaggaagactgtgaagagttgggaatagagaatgaa
aaacatgaaaacgggtcacctgaagaatgtcctggaagcaccgtacctcctcctggggac
tatgtgttcacgtttgaacaaggagacactagacactattacaatatctgctccaatgtt
acccctgatagtgcccggagccttccacgacctctctctcctccaggtcctatggaagta
caaccagatcaagaaagagaggaagtgaatcagacagacacagtgccaatttttcaaccc
ccaccagggtttggagacagcagttcagatgatgagttctttgatgctcaggaaagattc
acatcccctgaagaacccttctcaactgctatgacagaaaattctgcagagtcaagcacc
atattacggacagtaagcctgagggagattggcatctgtgcaagtgaacaagaggcagag
gatctacagaagaaagaaaaggaacaaagaaaaatggtttctcaagctgaatcatcagat
ttcaacaaaagatccaaaaagcgtcgctcattcatggaaacaaattacacatccctggta
tcattcccagaagaggatcatttaggtaacagctatggaaactgcatcccaaactatggt
gctatatcagtcaaccaaggtgctggacgaatggcatgttttgatggaggatgctcagat
caaggtccatgtcctacagtcttatgcctaacagattctgaaggagaaccagcacagctg
gatttcaaacccatcaacccatccaaagtcaatggatcaggaccacataatcccactgat
acacactcaaacaaagcatatcagcggaaacagcaacttatagagatggaaccagattcc
atggagttcaaatcagtaactgaactaatgtctactgtatcgccagctatagtagcagta
cgctcccatgtagacttacaggataaagaaaacaccagtaaccatagcagagatgatcaa
gaggaaggtgcagtgggaggtctagttgaaaggctgtttggaggccacttgttctttgat
gtgtctagaggacagtatgaaagcagagatgatcaagtaagcaaacaaatggaagatcat
ttccaagacagttcagtgactcaaaaaagcagctcactaccaaaactaggccaggtatct
ccattaagtttaccctacttccatgtcccaagcatatcgtacaccacaagctctgaatta
aacagagatgacgacatggtacatctccagtttgggatgggagagcactcagtgcagcca
aaagagaggaccagaagtcagagcttgtctacatcttttgataatggtacatcacattgc
ctaacaaagcacttattttcagagcacttcagagaaccagaatctgaggaaactgatgat
atttgtgacccttcactccgagaactatcttctagtcttccatcctatgaaccaagccaa
aggttccttcttacaccatgttcatccggcatccttgggcgactctctgcctcaacgttg
cggggaaagatccagaaccttcccctctacttatcacgttcccaggaaatgttaaatgcc
atttccaatggcagtggcaatgctaagcctgcaagaagactttcagaaacacaactacag
aaaaacgaagttgaagtagcaaaagaggcaactgaggatgtaacgttgaatgcaggttct
cctgaggtaacagaggtaaaagtggttaccattgtatccgaagaggtcactgaggtcatt
gaggaggtaagagaggtcagccacattactcctaaaacatgtggactgcagaaaaccaaa
agtgaacctaaagatttttctgtaaaagccatatcccccttgttctccaaatcagacaac
tcttttcaagtcagcccctcgtctgtagtggttactactcagaacctaaacggaccctgg
gggctggtaacatctagtgggttacaaggatgtagccactctccctcaagcacaagtcct
cataacttaatttctagttgtggggtttttgcaaactgccagtccaaacctaccctaacc
cagccacaatccttgcccagctcaaagctacatgagaaaccaaacctcagctgcagctca
gtactggctatggggtgtgacactgtaatggaaggtgctcagacacccttagagacttgc
cacacagtatacaccaactgtttcagtggagttcttgacagtgccagtttcgatgacgaa
ctcaccgtatatgagttttcccgcagaacaagccagggtgaacctggggatgctgttctg
acatctgttcctccttcctcgctctctgcatcacctgcatctttctctccatcttctcca
ttgccctcattccctcatctagtactgcctgcttcttcatctacagaacttagtactctt
ctgtttccgttggatgctcctgattgcttcctttcggatcctcacgaagacatcatcact
tcactgctgactcgtcgatatcccctaccaccaacaggattcctttctttgcaaagggat
gtggataccctcctaagtgttcttgctggcgctatgaagaacgaagatggagtccatgag
caccccagggatacctgtgtggctcacttttcagagaacaaaaggcgattacatgtagag
gctagggggcttttagctggatgccaacgcgtggtcagggttgggcagacgccagaggaa
acacttcagtcgttgtctgaaagcttccgctcactggtacagctgacaagtgtgtgttta
tgtttctctagctgccagcgatgcagggagcgccatgcccaagcacttacaggactagca
agtgttgcaaaaacttatcaggactttgctcgggcagcagagcttgtgggaagtgctcct
gaaagaaagacttgtcatgatctcagtattaaactcctggctcgccaatgcactgcacta
acaacttcagtcttctgcctcacccagctttttcgcactctcactgccctttga
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integrated database retrieval system
