KEGG   Labeo rohita (rohu): 127170034
Entry
127170034         CDS       T09007                                 
Symbol
wnt5a
Name
(RefSeq) protein Wnt-5a
  KO
K00444  wingless-type MMTV integration site family, member 5
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh04150  mTOR signaling pathway
lroh04310  Wnt signaling pathway
lroh04916  Melanogenesis
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    127170034 (wnt5a)
   04150 mTOR signaling pathway
    127170034 (wnt5a)
 09150 Organismal Systems
  09152 Endocrine system
   04916 Melanogenesis
    127170034 (wnt5a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:lroh00536]
    127170034 (wnt5a)
Glycosaminoglycan binding proteins [BR:lroh00536]
 Heparan sulfate / Heparin
  Morphogens
   127170034 (wnt5a)
SSDB
Motif
Pfam: wnt DUF6973
Other DBs
NCBI-GeneID: 127170034
NCBI-ProteinID: XP_050973741
LinkDB
Position
8:complement(1075789..1085060)
AA seq 374 aa
MLFKLKLMRSGWGGVTDARHGVVAITFCAFFMQVFVEASSWWSLAMNPLLIPEAYIIGGQ
PLCSQLTGLSKGQKKLCQLYQDHMQFIGEGAKTGIQECQYQFRNRRWNCSTVDNTSVFGR
VMQIGSRETAFTYAISAAGVVNAVSRACREGELSSCGCSRAARPKDLPRDWLWGGCGDNL
NYGYRFSKEFVDAREREKTFTKGSVESARLLMNLHNNEAGRRIASDLAHVSCKCHGVSGS
CSLKTCWLQLADFRKVGDALKEKYDSAAAMRLNSRGKLVQVHSKFNSPTSSDLVYIDPSP
DYCVENKTTGSLGTQGRLCNKTSEGMDGCALMCCGRGYDQYKAQLVERCHCKFHWCCYVK
CKRCSRVVDQFVCK
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgttgttcaagctgaagttgatgcgctcggggtggggtggagtcacggacgcacgacac
ggagtggtcgccattaccttttgtgccttctttatgcaagtgtttgtggaagctagctca
tggtggtctctagcgatgaatcccctcctgataccagaagcatatatcataggaggacag
ccactgtgtagtcaactaacaggactgtccaaaggtcagaagaagctttgccagctatac
caagatcacatgcagttcattggagagggtgccaagacaggcatccaggagtgccaatac
cagtttcgcaaccgccgctggaactgcagtacagtggataacacctcagtgtttggcaga
gtcatgcagatagggagcagagagacagcattcacatacgctatcagcgctgctggcgtg
gtcaatgcagtgagccgtgcctgcagagagggggagctgtcgagctgtggctgcagcagg
gcagcgagacctaaagatctgccacgagactggctgtggggcggctgtggtgacaacctg
aattatggataccgcttcagcaaggagtttgtggatgcacgtgaacgggaaaaaactttc
accaaaggttctgtggaaagtgcaagactgctgatgaaccttcataacaatgaagcggga
cggaggatagcgtcagatctcgcccatgtgtcctgtaagtgtcatggcgtgtctggctct
tgcagccttaaaacatgctggttgcaacttgctgatttccgcaaggtgggtgatgctctg
aaggagaaatacgacagcgccgctgccatgaggctgaacagccgcgggaagctcgttcaa
gttcactccaaatttaactctcctaccagcagtgatctggtgtacatcgaccccagtcca
gattactgcgtagagaacaaaactactggctctttaggaactcaaggtcgcctctgtaac
aagacgtctgaaggcatggatggctgcgctctcatgtgttgcggtcgaggttacgatcag
tacaaggcacagctggttgaacgttgccactgcaagtttcactggtgctgctacgtcaaa
tgcaagcgctgttcgcgtgtagttgaccagtttgtgtgcaagtag

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