Labeo rohita (rohu): 127170034
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Entry
127170034 CDS
T09007
Symbol
wnt5a
Name
(RefSeq) protein Wnt-5a
KO
K00444
wingless-type MMTV integration site family, member 5
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04150
mTOR signaling pathway
lroh04310
Wnt signaling pathway
lroh04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
127170034 (wnt5a)
04150 mTOR signaling pathway
127170034 (wnt5a)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
127170034 (wnt5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lroh00536
]
127170034 (wnt5a)
Glycosaminoglycan binding proteins [BR:
lroh00536
]
Heparan sulfate / Heparin
Morphogens
127170034 (wnt5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
wnt
DUF6973
Motif
Other DBs
NCBI-GeneID:
127170034
NCBI-ProteinID:
XP_050973741
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Position
8:complement(1075789..1085060)
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AA seq
374 aa
AA seq
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MLFKLKLMRSGWGGVTDARHGVVAITFCAFFMQVFVEASSWWSLAMNPLLIPEAYIIGGQ
PLCSQLTGLSKGQKKLCQLYQDHMQFIGEGAKTGIQECQYQFRNRRWNCSTVDNTSVFGR
VMQIGSRETAFTYAISAAGVVNAVSRACREGELSSCGCSRAARPKDLPRDWLWGGCGDNL
NYGYRFSKEFVDAREREKTFTKGSVESARLLMNLHNNEAGRRIASDLAHVSCKCHGVSGS
CSLKTCWLQLADFRKVGDALKEKYDSAAAMRLNSRGKLVQVHSKFNSPTSSDLVYIDPSP
DYCVENKTTGSLGTQGRLCNKTSEGMDGCALMCCGRGYDQYKAQLVERCHCKFHWCCYVK
CKRCSRVVDQFVCK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcaagctgaagttgatgcgctcggggtggggtggagtcacggacgcacgacac
ggagtggtcgccattaccttttgtgccttctttatgcaagtgtttgtggaagctagctca
tggtggtctctagcgatgaatcccctcctgataccagaagcatatatcataggaggacag
ccactgtgtagtcaactaacaggactgtccaaaggtcagaagaagctttgccagctatac
caagatcacatgcagttcattggagagggtgccaagacaggcatccaggagtgccaatac
cagtttcgcaaccgccgctggaactgcagtacagtggataacacctcagtgtttggcaga
gtcatgcagatagggagcagagagacagcattcacatacgctatcagcgctgctggcgtg
gtcaatgcagtgagccgtgcctgcagagagggggagctgtcgagctgtggctgcagcagg
gcagcgagacctaaagatctgccacgagactggctgtggggcggctgtggtgacaacctg
aattatggataccgcttcagcaaggagtttgtggatgcacgtgaacgggaaaaaactttc
accaaaggttctgtggaaagtgcaagactgctgatgaaccttcataacaatgaagcggga
cggaggatagcgtcagatctcgcccatgtgtcctgtaagtgtcatggcgtgtctggctct
tgcagccttaaaacatgctggttgcaacttgctgatttccgcaaggtgggtgatgctctg
aaggagaaatacgacagcgccgctgccatgaggctgaacagccgcgggaagctcgttcaa
gttcactccaaatttaactctcctaccagcagtgatctggtgtacatcgaccccagtcca
gattactgcgtagagaacaaaactactggctctttaggaactcaaggtcgcctctgtaac
aagacgtctgaaggcatggatggctgcgctctcatgtgttgcggtcgaggttacgatcag
tacaaggcacagctggttgaacgttgccactgcaagtttcactggtgctgctacgtcaaa
tgcaagcgctgttcgcgtgtagttgaccagtttgtgtgcaagtag
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