Labeo rohita (rohu): 127170044
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Entry
127170044 CDS
T09007
Symbol
cacna2d3a
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent calcium channel subunit alpha-2/delta-3
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04010
MAPK signaling pathway
lroh04260
Cardiac muscle contraction
lroh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127170044 (cacna2d3a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
127170044 (cacna2d3a)
04261 Adrenergic signaling in cardiomyocytes
127170044 (cacna2d3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127170044 (cacna2d3a)
Ion channels [BR:
lroh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
127170044 (cacna2d3a)
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
Flagellin_N
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
127170044
NCBI-ProteinID:
XP_050973752
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All DBs
Position
8:880195..1050669
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AA seq
1082 aa
AA seq
DB search
MKCVLYCGFFLLLWITPNTRVCASQQGIPLSVVKLWASAFGGEIKSIAAKYSGSQMLQKK
YKEFEQLVRVEEIDGIKLVKKLAGKMEQMFHKKAEAIKRLVEAAEEAHLNHEEDPELQYE
YFNAVLINEMDEEGKTVELGGEFILQPNEHFNNLSVNLSLSVVQVPTNMYNKDSAIVNGV
YWSEALNKVFVDNFKRDPSLIWQYFGSAKGFFRQYPGIKWTPDEHGVLEFDCRNRKWYIQ
AATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAYNEELHYVEPCLN
GTLVQADIANKDHFRDRLDKLFAKGIGMLDVALTEAFELLSNFNETGRGSVCSQAIMLVT
DGAVETYDTVFAKYNWPDRKVRVFPYLIGRESAFADNLKWMACANKGYFTQISTLADVQE
NVMEYLHVLSRPKVIDREHDMVWTEAYVDSTRPQAQKLEDAQGPVLMTTVAMPVFSTKNE
TRNKGILLGVVGTDVPVSEILKAIPKYKLGIHGYAFAITNNGYILTHPDLQPLYEEGKKR
RKSSYSSVDLSEVEWEDKEDELRNAMVNRQTGSFSMKVKKTVDKGKRVLVLHNDYYYTDI
KGTPFSLGVALSRGHGKYFFRGNISAEEGLHDLEHPDVVLANEWTYCNTEEHPEHNFLTQ
IDAIKLHFNGEPHLKCDKNLIQEVLFDAVVTAPLEAYWTSLALNKSENSDKGVEIAYLGT
RTGLTRLNLFVMPDQLTNQDFLTGEDKEVVFSADHFPLWYKRAAEQVPGTFIYSLPFGTG
SENKSVVLASSAIHLLDERESPIAAAVGIQMKLEFFQRKFWTASRQCAALDGKCSISCDN
DEISCYLIDNNGFIIVAEDLSLTGVFFGEAEGAVMSKLVSMGSFKRVNLYDYRAICRVYS
QTSDTAHTLLHPYFALFAAVRWLLTEFVIFLVEFNLYSWWYSDLTIRAQRGGKTMLVPCD
KEYPAFVSERTIKETVGNIDCESCVKSFVIQQIPSSNLFMVVIDNTCDCSDFGPVTMDPI
EIMYNESLKCERLKFQKDRRRPDTCHPFHHEENSMECGGSVDLTPSLTATVLIVLIVTFF
PR
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtgttttgtattgtggatttttcctcctgctgtggattacacccaataccaga
gtatgcgcatctcaacaaggaattcccctgtcagttgtaaaactctgggcttcagctttt
ggtggagagattaaatccatcgccgccaagtattctggctctcagatgttgcaaaagaag
tacaaggagtttgagcagttggtgagggtggaggagattgatggaatcaaactggtgaag
aaacttgctgggaaaatggagcagatgttccacaagaaggctgaagccataaagcggttg
gtggaagcagcagaggaagcccacctgaatcatgaggaggatcctgaactacagtatgag
tactttaatgcagtgctgatcaatgagatggatgaggaggggaagactgtggagctgggt
ggagaatttatcctgcagccaaatgaacatttcaacaatctgtctgtgaacctcagcctc
agtgtcgtccaggttccaactaacatgtataacaaagactcagccatagtgaatggggtg
tactggtcagaggcactcaataaggtgtttgtggacaactttaaaagagacccttctctc
atatggcagtactttggtagcgccaaaggtttcttcagacagtatccaggtataaagtgg
acacctgatgaacatggggttctagaattcgactgtcgaaatcggaaatggtatatccag
gctgctacatctcctaaagatgtggtcattttggtagatgtgagtggcagtatgaagggg
ctacggctgaccatagctcggcagactgtctcctccatattggatacacttggggatgat
gacttttttaacattattgcttacaatgaggagctacattatgtggagccgtgtctgaac
ggaacattggttcaagctgacattgccaacaaagatcatttccgtgatcgtcttgacaag
ctttttgctaaaggtataggcatgctggacgtggctctgacagaggcttttgaacttctc
agtaattttaatgagacgggccgaggcagtgtgtgcagtcaagccattatgttggtgaca
gatggagctgtggaaacatatgacactgtttttgccaagtacaactggcctgatagaaag
gtgcgtgtgttcccttacctgattggtcgggagtctgcctttgctgataatctgaaatgg
atggcgtgcgctaataaaggttattttacccagatctccacactagcagatgttcaggag
aatgtgatggagtatctgcatgtgcttagtcggccgaaggtcattgatcgagagcatgac
atggtgtggacagaagcctatgttgatagcactcgtccacaggctcaaaagctggaagat
gctcagggtcctgtgctcatgactactgtggctatgcctgtattcagcaccaagaacgag
actagaaataaaggaattcttcttggagtagttggcacagatgttccagtgtctgaaata
ctgaaggccatccccaaatacaagctgggaatccatggttatgcctttgccatcaccaat
aatggatacatactcacccatcctgacttgcagcctctgtatgaagaagggaaaaagagg
agaaaatccagctacagcagtgtggatctgtctgaggtggagtgggaagacaaggaggat
gagttgcgtaatgccatggtgaacaggcagacgggaagcttctctatgaaagtgaagaag
actgtggataaagggaagcgtgtgcttgttctacacaatgactactactacacagacatt
aaaggaactcccttcagcttaggagtggccctgtccagaggtcatggcaaatatttcttc
agaggaaatatctctgctgaagaaggactacatgatttggagcacccggatgttgtatta
gcgaatgaatggacatactgtaacacagaggaacatccagaacacaattttctaactcag
attgatgccatcaagctccattttaatggagaaccacatctgaagtgtgataagaatctg
atccaggaggttctgtttgatgctgtggtcacagcaccactggaagcgtactggaccagc
ctcgctctcaataaatcagaaaattctgataaaggggtggagatagcttacctcggcact
cgaactggactaacacgcctcaacctttttgtgatgccagaccaactgaccaatcaagac
ttcctgacaggagaagataaggaggtggtgttcagtgctgatcattttcctctgtggtac
aagcgggctgctgaacaggtgcctggcacctttatctactctcttcctttcggcacaggc
tctgagaataagagtgtggttttggccagtagcgccattcatttgttggatgagagagag
tcgcccatcgctgcagctgtgggtattcagatgaaactcgagttcttccagaggaagttc
tggactgccagcagacagtgtgctgcactcgacggaaagtgttccatcagctgtgacaat
gatgaaatcagctgttacctcattgacaacaatggattcattattgtggctgaggatctg
tctttgactggtgtgttctttggagaggcagagggcgctgtaatgagcaaactggtttca
atgggttcttttaagagggtgaatctgtatgactatcgggccatctgtagggtgtactca
cagaccagtgatacagcacacacactcttacatccctactttgctctgtttgcggctgtc
cggtggcttctgactgagtttgtcatatttctggttgagtttaacctgtacagttggtgg
tactctgacctcaccattagggctcagagaggaggcaaaacaatgttggttccttgtgat
aaagagtatccagcattcgtgtcagagcgcaccattaaagaaaccgtcgggaatattgac
tgtgaaagctgtgtaaaatcatttgttattcagcagattcccagcagtaatcttttcatg
gtggttattgacaatacatgtgactgcagtgactttggacccgtcaccatggaccccatc
gaaattatgtataacgaatctctgaaatgtgaacggttgaagtttcagaaggacagaagg
cgaccagacacgtgccacccctttcatcatgaggaaaactcaatggagtgtggtggttct
gtggacttgactccatcactaacagctacagttcttatagtcctgatagtcactttcttt
ccgaggtga
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