Labeo rohita (rohu): 127170114
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Entry
127170114 CDS
T09007
Symbol
si:ch211-166a6.5
Name
(RefSeq) clustered mitochondria protein homolog
KO
K03255
protein TIF31
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
lroh03012
]
127170114 (si:ch211-166a6.5)
Translation factors [BR:
lroh03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
127170114 (si:ch211-166a6.5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_12
TPR_10
TPR_NPHP3
CLU_N
GSKIP_dom
Motif
Other DBs
NCBI-GeneID:
127170114
NCBI-ProteinID:
XP_050973858
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All DBs
Position
8:complement(34536039..34562893)
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AA seq
1412 aa
AA seq
DB search
MPAVDREGVGGEEALPALEGVAGRGNDKLKRRVGSVTPDSSPNTLRKTTRASRIEEKTSS
QREKTREEMRDTAKKGNGEKRAMDVSSSANGKKSTGSKKDDDGSFPVKIQGAGVEPFELQ
VHGFWLVQDAIMTILGKEEVAPRTSIALAHSGVTLDPMMELQDVKGFKAGVTLRLVEEPY
SPRSAQAHLARVQEMLKTVRPQDALMEGRSPTVLNTLTQTSEAPPTLHSSKNKRANSKTE
QSAEAPPPPAYILPGASEHPPLTTLLPTNNTHSEAPSFLLDLSVSCWNPPPGFRKLQGDL
LYLSVHTLEGKQCDITSCPRGFYMNRSTLEVFDPRPAQSTPVFHCLTDLLSHISPQFKHN
LSTLRHRPSLPAEESLSTPYRTLSWLGFSSLHSHKSSFSGRLGLDQDINARAADWNKELQ
AARDLPQRSLEERLQRDRALLQVNSAFVWAVAQAAEKVMDGCVDSFNGSNEDPAFLCGGV
FMSMPAQRDQWLGGERSHRAAQRLELRCVQAYSDLDGDLQNLHTIPTALADYRGVRLSAQ
GLAPGIQAPEQAEVPNGLLYGYSAGPLENPSRRKLLELLAQSAKALSLQRHAVLGPTGHQ
LPLFTSIDAQGMLGADGRYYLLDVYRTMPADANFYVEEGEEAEGGKEEGGAETEGSFPRR
YPHVLCRLRPELVKAFIQHKHTQFSQQVKAYLEENKGVEECMDSADTRNVDAIRKACKDV
GSLSDIIFEMRFNPNIYCPGVQFPSSDNDAVELQKRLLKEAASFIINDRIPEFMNDCIHG
TDVPIDGASLRQALHQKGINLRYLGHLILSISQSDRKHQLRHITRLAFAEIVVRCAQRFF
SGYIQGVETSNLSAAASHFLCCLLVPHFSAASNGEESKKRSKRRGRGGGGVSDSTTWTAL
SGNELWSLICQDAQETYRLKEGLGSNVDHLVEQYGLQKISLLREMCLKIGIQLRLREYVL
DNRNKAPISPDDVLNILPVVKHITMTTSDATRMFKAAQNSLQKGLLEQAYEQLKEATYLF
SRVCDDLHPEACHCLSLLAKVAYVQGHPTEARSVQLRVVVISERVLGFDHPNTIQQYVLL
AVYLLAGGETALAQRCLYRAKLLLLTVHGADHPYTAVIDASLGLVLQGEQSLQYLQSALK
LNSSFRGDTDLTTALMHHLLAQRLCVAGDYRGGMNHEKEAHSIFQNKWGEDHPQTKCSSD
FLRNITQQAVRVERSIRQGGAELCDTPPEGLVPTQETTLEQLALVNAILKTSYRTKMMEF
KERLKEKKAAEAEKAKLENSKTTNEEEASELQTSNGEITEEATANGEHKQEATDGNAESQ
SSETDSSEKPDHSNTNGQIESHLHNGDCATKNESEEEEQQSKITNGVSTESQLKSNVLMS
VNEAQSESAVVNGKECVKNGCSGDSEKQAEVE
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgtagaccgagagggagtgggaggagaggaagcactgccagcgctggaggga
gtggccggccgagggaatgacaaactaaaaagacgtgttgggtcagtcacacctgacagc
tctccgaacacacttcgcaaaacaacacgagcgtcccgaatcgaagagaaaaccagcagc
cagagagagaaaaccagagaagaaatgagggacacggcgaagaaaggaaacggagagaag
agagctatggatgtctccagttcagccaatgggaaaaaatctactggaagcaagaaagat
gacgatggatcatttccagtgaagattcaaggtgcaggtgtcgaaccgtttgagctgcag
gttcatggattctggctggtccaggatgccatcatgaccattctgggcaaagaagaggtg
gcgccgcgcacgtccatcgctctggcccattcaggtgtgaccctcgaccccatgatggag
ctccaggacgtcaagggcttcaaagctggagtcactctccgtctagtggaagagccgtac
tcacctcgatcggcacaggcacatctggcacgtgtgcaggagatgctgaaaactgtcaga
ccccaggacgccttgatggagggccgatcacccactgtattgaacacactcacccaaaca
tccgaagcccctcccactctgcactcatcaaagaacaaacgagccaatagtaagacagag
cagtctgctgaagccccgccccctcctgcctacattctgcctggagcttcagaacatcct
cctctgacgaccctgttgcccaccaacaacacacacagcgaagctcccagtttcctgctc
gacctgtcagtcagctgctggaaccctcccccaggtttccggaagctgcaaggtgactta
ctgtacctcagtgtccacactctggagggcaagcagtgtgacatcacttcctgcccacgt
ggattttacatgaacagatcgaccctcgaagtgtttgaccctcgtcctgctcagtcgact
ccggtgttccactgtctgaccgacctgctgtcccacatcagcccacagttcaaacacaac
ctgagcacactgcggcacaggccgtctctgcctgctgaggagtctctgtccactccgtac
cgcacacttagctggctgggcttctcctcacttcactcgcacaaatccagtttcagcggc
aggctgggtctggatcaggacatcaacgcacgggctgctgactggaataaggaacttcaa
gcagccagagatcttcctcagaggagtctggaggagagacttcagagggacagagcatta
ctgcaggtgaacagcgcttttgtgtgggctgttgctcaggcagcagagaaggtgatggat
ggttgtgttgactcattcaacggttctaacgaggacccggctttcttatgcggcggcgtg
ttcatgagtatgccggcacaaagagaccagtggctgggaggagaacggagtcacagagct
gctcagcgcctcgaactgcgatgtgttcaggcttacagcgacctggacggagacctccaa
aacctgcacaccatccccaccgcgttggccgactaccgcggcgttcggctgtccgcgcag
ggcctggcaccgggtattcaggcccccgagcaggccgaagttcctaatggccttttatac
ggctacagcgcaggaccattggaaaacccatcgagacgaaaactcctagagctgctggct
cagtccgcaaaggctctttctctacaaagacatgcggttctggggccgaccgggcatcag
ttgcccctcttcacctctattgatgcccaggggatgctgggggccgatggtcggtattac
ctgctggatgtgtatcgtactatgcctgctgatgccaacttttatgtagaagaaggagaa
gaagcagaaggaggaaaagaagaaggaggagcagaaacagaagggagttttcccagacgg
taccctcacgttttgtgtcgattgcggcccgagctagtgaaggcgttcattcaacacaaa
cacactcagttctcccagcaagtgaaggcttacttggaggagaacaaaggggtggaagag
tgtatggattctgctgacactcggaatgtagacgcaatcagaaaagcttgcaaagatgtc
ggctccctcagtgacatcatctttgagatgcgtttcaaccctaatatctactgcccaggt
gtgcagtttcccagctcagacaatgatgccgtggagctacagaagagattattgaaggaa
gcggcatcttttatcataaacgaccggataccagaatttatgaacgactgcattcacggc
actgacgtaccgatagatggtgcttctttacgacaagctctccatcagaaaggcataaac
cttcgctatctaggtcacctgatcttgtccatcagccaatcagatcgcaaacatcaactg
agacacatcacgaggttggcattcgcagagatcgtagtgcgctgtgcacagcggttcttc
agtggctacattcagggagtggagacgtcaaacctgtcagcagcagcgagtcatttcctc
tgctgcctgttggttccccacttcagtgccgcatcaaatggggaggagtctaagaagcgc
tccaagaggcgtggccgtggaggaggcggggtttccgacagcacgacgtggaccgctctc
agcgggaatgaactgtggagtctgatctgtcaggatgctcaagaaacatacagacttaaa
gaaggactagggtcaaatgtggaccatctagtagagcagtatggactccagaagatatcc
ttgttgagagagatgtgcttgaagattggcattcagctccgtctcagagaatacgttctc
gacaaccgtaacaaagcgcccatctctcctgatgacgtgctcaacattctgcccgtcgtc
aagcacataaccatgacaaccagcgacgccacacggatgttcaaggcggctcagaacagt
cttcagaaagggttactggagcaggcgtacgagcagctgaaagaagcgacgtatctcttc
agtcgtgtgtgcgatgaccttcaccctgaagcctgccattgtcttagtctgctggcaaaa
gtggcctatgtacagggccatcccactgaggctcgtagcgtgcagctgagggtcgtggtc
atcagcgaaagggttctgggtttcgatcatcccaacaccattcagcaatacgtgttgttg
gcagtgtatctgttagctggaggcgaaaccgctctggctcagcgctgcctgtatcgtgcc
aaactacttctgctgacggttcacggggcagatcatccttacaccgcagtcattgatgct
tctctgggattggttcttcagggagagcagtcattacagtatctacagagcgcactgaaa
ctcaacagctccttcagaggagacacagacctgacgacagctctgatgcaccatctgctg
gcgcagagactgtgcgtggctggagactacagaggaggcatgaatcatgaaaaggaagct
cacagcatcttccagaacaagtggggtgaagatcatcctcaaaccaaatgcagctctgac
ttcctgcggaacattacccagcaggccgtgcgtgtagaacggtcaattcgtcagggaggc
gcggagctctgtgatacaccgcctgagggtttggttcccactcaagaaaccacactggag
cagcttgctctggtcaatgccatactgaagacttcatacagaacaaaaatgatggagttc
aaagagaggctgaaagagaagaaagctgcagaagctgaaaaagctaaactggagaactcc
aaaacgaccaatgaggaagaagcttcagagctgcagaccagtaacggagagattactgag
gaggccacagcgaatggggaacacaaacaagaggccacagacggaaatgcagaaagtcag
tcatcggaaactgactcttctgagaaacccgaccactcaaacacgaacggccagatcgag
tcccatctgcataatggtgattgtgccacaaaaaacgaaagtgaggaggaggaacaacag
tcaaagatcaccaacggagtctccactgagagccaattaaaatcaaatgttttgatgtct
gtaaatgaagcacagtcagaatcagcagtggtgaatgggaaagagtgtgttaaaaacgga
tgttcaggtgattctgagaaacaggctgaggtagagtga
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