Labeo rohita (rohu): 127170116
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Entry
127170116 CDS
T09007
Symbol
pxnb
Name
(RefSeq) NAC-alpha domain-containing protein 1 isoform X1
KO
K05760
paxillin
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04370
VEGF signaling pathway
lroh04510
Focal adhesion
lroh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04370 VEGF signaling pathway
127170116 (pxnb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127170116 (pxnb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
127170116 (pxnb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
127170116 (pxnb)
Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
LIM domain-containing proteins
Paxillin family proteins
127170116 (pxnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paxillin
LIM
Motif
Other DBs
NCBI-GeneID:
127170116
NCBI-ProteinID:
XP_050973861
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All DBs
Position
8:33938043..33976345
Genome browser
AA seq
1166 aa
AA seq
DB search
MDDLDALLADLESSTAHISKCPVFLPEETPYSYPTGGHLFQDDSPPPPLPPPPSAEALNG
SLSPRPDSQDSSQQSLGSAHKSTLSRDSSPPASHTEEDHVYSFPNKQKHSDSSAAAMTSA
LGSNLSELDRLLLELNAVQQNAPSYCTTEDAAPPLPPCSVAHYIQENGAHPGITLTPTAQ
DKPQRNGTKGTEDGRPTVESLLNELESSVPSPTPSPCALTNELTDGQVDAPSDQQGRISA
TSATRELDELMACLSDFKVQSNPSSLGSLNCEPMFEQTTTIAEIHSPPTTAVSKSLSHNL
PAEPSRYSPSHPLNFELHIVEDSAETGAAPPPSSVVPKPSSRLSPPVAFGPHFSPVHDLD
LDSSIDVSASLLSSHVESLVVLSQTVTTTAAPGGEDLCGLREESPSAKLTSSRLKSCSPI
TKSPSPASASVVSITNERVSPLMTPASIDLYLSSSEAKPISPVPSFSRSPLPTVSESPSL
SLPKAVSPPLILSSSPSVVVPKSPSPKQSSGQPDPAVSLKPIPSTGLEPPTYEPSLDDAL
DKLLAMSFSRPENESPITASAASQLASEVQPEVYEETLVAADRSNIHPDTHTESEMGDGL
LEDQSDCRSDLDWADMELKMAYEGPDGSMTPMTEASWMDESLTPSSCPGTPDAQMDLPML
HMAGTLDRISASGHIKSVIRRTKEIQNVHPMYRDGLIRRKMGPLIFHKSNSQDRLIEELQ
GKLGIARKDRPKKQQPDDWLTEGVIVMSNPKRSREDHIKEVDKIIIPPESPLPQRKVIPP
PQSLPIPRPPPLAEEPKRPPPVKLAPAPLPPPPPPAPSPPPREPTPPPPPQPSLPPVPPK
PPTPEPVVVLAPSPKPNPAPQHIPTPPPAPVAPPKVLVSVGCQTEYDPLFPPLQIMAQGK
GPQPQVNKLDNMLGSLQSDLHKLGVQTVAKGVCGACCKPIVGQVVTAMGRTWHPEHFVCT
HCQEEIGSRNFFEREGQPYCERDYHHLFSPRCYYCNGPILDKVVTALDRTWHPEHFFCAQ
CGAFFGPEGFHEKDGKAYCRKDYFDLFAPKCGGCARAILENYISALSALWHPECFVCREC
FTPFVNGSFFEHDGQPYCEVHYHARRGSLCSGCQKPITGRCITAMGKKFHPEHFVCAFCL
KQLNKGTFKEQNDKPYCQGCFIKLFS
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggacgatctagacgcattgcttgcagatctcgagtcttccaccgcccatatctccaag
tgcccagtttttcttcctgaggagacaccatattcctaccccaccggagggcaccttttt
caggatgactcccctcctccacccctgccccctccaccctcagctgaggccttgaacgga
tcgctctcaccgcggccggactcccaggactcctcacaacagtctctgggctctgctcat
aaaagcacgttgtctcgggacagcagtccaccagcatcgcatacggaagaagaccacgtt
tacagttttcctaacaagcagaagcattcagactcatcggctgcagccatgacttctgct
ctgggcagcaacctgtctgaactggaccgccttcttctggaactcaatgctgtacagcaa
aacgccccatcttactgcactacagaagatgctgcacctccactgccaccctgtagtgtt
gcccactatatccaagagaatggagcccacccaggcatcacactgacaccgacagcccag
gacaagcctcagaggaatggaacgaaggggacagaagatggccgtcccacagtggaaagt
cttctgaatgagttggagagctctgtgccttccccaacgcccagcccctgtgctctgacg
aacgaattgacggacgggcaagtagacgcaccttctgatcagcagggcagaatatcagcc
acctccgctacacgagaactggatgagctcatggcctgcctgtcagattttaaggtgcag
agcaatccaagttctttgggctccctgaactgtgagccaatgtttgagcaaactactacc
attgctgaaatccactctcctcctacaactgctgtgtccaaatccctgtcccataacctc
ccagcggaaccaagccgatattccccaagccatcctttaaactttgaactgcacattgtt
gaggattctgctgaaacgggggctgcgcctccaccgtccagtgttgtcccaaagccttcc
tctcgactgtctccacctgtggcattcggccctcatttttctccagtgcatgacttggac
ttggattcttccattgatgtttctgcttccctgctctcctcccacgtggaatcgctagtg
gttctgtcacagactgtaaccacaactgccgcacctggaggtgaagacctttgtggtctt
agggaggaaagtccttctgcaaaattgacaagctctaggctgaagtcctgttcgcctatc
accaagtctcctagtccagcaagtgcctcagtggtcagcataaccaatgaaagagttagt
ccattgatgacaccagcatctattgatttgtatctctccagctctgaagcaaaacctata
agtccagtgccatctttttccagatctccacttcctacagtctctgagtcaccatctctg
tctcttcccaaagctgtttcaccccctctaatcctatcctcttccccatctgtagtggtt
cccaagtctccaagcccaaaacaatcatcaggacagcctgatccggctgtttctctcaaa
cccattccttccactgggcttgaaccaccaacctatgagccatctcttgatgatgccttg
gataaacttcttgccatgagcttcagcaggcctgagaatgagtccccaatcacagcatca
gcggcctcacagctcgcttcggaagtacaaccagaagtctacgaggagacgttagtagca
gcagatcgcagcaacattcatcctgacactcacacagaaagtgaaatgggagatgggctc
ttggaggatcagtcagactgcaggagtgatcttgactgggctgacatggaactaaagatg
gcctacgaaggacctgatggctccatgacccccatgaccgaggcaagctggatggatgag
tctctcactccgtcgtcttgccctggaaccccagatgcccaaatggaccttcccatgctg
catatggctggaacgctggacaggatctcagcctctggacacatcaaatcagtgattaga
cgtaccaaggagattcaaaacgtccaccccatgtaccgagatggcctgatacgtaggaag
atgggccccctcattttccacaagagcaactcccaggaccgactcattgaggaactgcaa
ggcaagctgggaattgcccgtaaggatcgtccaaaaaagcaacagccagatgactggctc
acagaaggcgtcattgtcatgtccaaccccaaacgctcacgggaagaccacatcaaggaa
gtggataagataatcatacctcctgagtctcctcttcctcagaggaaggtgatcccacct
ccccagtctctcccgatccctcgtcccccgccccttgctgaagaaccgaagcgcccccct
ccggtcaaattagctcctgcccctttgcctccacccccaccacctgccccctccccacct
ccaagagaacccacacctccccctcctccccagccaagtctgcctccagttccacccaag
cccccgacccctgaacctgtggtagttctagctccctccccaaagcccaaccctgcaccc
caacacatacccaccccaccacctgcccctgtggccccgcccaaagtgctggtgtcagtt
ggctgccagacggagtatgacccgctcttccctccactgcagattatggcccaggggaag
ggtccacaaccacaggttaataaactggacaacatgctgggcagtcttcagtctgacctc
cacaagctgggagtgcagacagttgctaagggagtgtgtggcgcctgctgcaaacccatt
gttggccaggtggtaactgctatggggcgcacatggcatccagagcattttgtgtgcaca
cactgccaggaggagattggttccagaaacttctttgagagggaaggtcagccatactgt
gagagagattaccaccatttattctctccacgctgctactactgtaacggacccatacta
gataaagtggtaacggcgttagacaggacgtggcatcctgagcactttttctgtgcccag
tgtggggcgttctttggtcctgaaggatttcatgagaaggatgggaaggcgtactgtcgt
aaagactactttgacctgtttgctcctaaatgtggaggttgtgctcgtgccatcctggag
aattacatctctgccctgagtgccctctggcatccagagtgttttgtgtgcagggagtgt
ttcacacccttcgtcaatggcagtttctttgagcacgacggtcagccatactgtgaggtt
cattatcacgcccgccgcgggtcgctgtgttccggctgtcagaaacccatcacgggccgc
tgcatcacagccatgggcaagaagtttcatcctgagcattttgtctgtgccttctgcctc
aagcagctcaacaagggcaccttcaaagagcaaaacgacaagccttactgccagggctgc
ttcattaagctcttcagctag
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