Labeo rohita (rohu): 127170154
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Entry
127170154 CDS
T09007
Symbol
kcnn1b
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1b
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127170154 (kcnn1b)
Ion channels [BR:
lroh04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
127170154 (kcnn1b)
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
Med4
Med9
DExH14_plug
DUF6775
Seryl_tRNA_N
IRK
Motif
Other DBs
NCBI-GeneID:
127170154
NCBI-ProteinID:
XP_050973905
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Position
8:27632464..27689606
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AA seq
830 aa
AA seq
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MRLVLVKPTNETGLLDSTGAARSERVPDHCNAKRHSAAGEAGMQHRYSGAVHQHHHHHHH
HQQHAEHRGGSRQTAHPLPKQSQENLPSPFSQEAPVKSQGSNPSLADCSKPSLSRQQSVG
GAAKPANCQQDYCSCSCGLQEHQQLLQQQQQQQQHHNPPPSLQLQVQQQRLLRSSLPNCC
VRGSGELRSQQPSLLQQRDNDSLRSGEQRNLAHHARAWTPDRCQGARNSVSPRSKSSPLS
SDSRLWLEENKHRHEGCKVNADANRLSHAGSRPSLSHGGPQYPQIAMNSCKYNGGIVRPL
GSLGASRRNLAELDSETQPLQTLHTSGLEVVVSKGNGEDPSKQSSENLVRQRPCSAPHKK
NKDIGYKLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVYTKESSYSFALKCL
ISLSTVILLCLIIMYHAREIQLFMVDNGADDWRIAMTYERILFIVLELLVCAIHPIPGQY
VFTWTARLAFTYTPSVADADVDIILSIPMFLRLYLIGRVMLLHSKLFTDASSRSIGALNK
INFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVHVCERYHDKVEVTSNFLGAMWLIS
ITFLSIGYGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDT
QLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKLN
DQANTLVDLAKTQNVMYDLVSELQERSEELEKRIGHLEAKLDSINSSLQALPGLLSQAIQ
QQQHHLLDGLTQRGFTLTRPSSQTSERSWASSVHRRRSPSTAPHTSSDSG
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttgtcttggtcaaacctaccaatgaaacgggccttcttgactccaccggggct
gcgcgcagcgaaagggtgccggatcattgcaacgcaaagcggcactccgccgcaggtgag
gcggggatgcagcatcgctactcgggagccgtccatcagcaccaccaccatcaccaccac
caccaacaacacgcggagcacaggggtggcagtagacagaccgcacaccccttgccaaaa
cagagccaagagaacctgcccagccctttcagtcaggaagcaccagtcaaaagccaaggg
agcaacccaagtctcgcagactgttccaaaccctccctaagtcggcagcagagtgtcgga
ggggctgccaaacctgcgaattgccaacaagattattgttcgtgcagctgcggattgcaa
gagcatcaacagctgttgcagcaacaacagcagcagcagcagcatcacaaccctccacct
tccctccagctacaggttcagcagcagcggctgctgaggagcagcctgcccaactgctgc
gtgcggggatccggggagctaagaagccagcagccgtctttgctgcagcagcgtgacaac
gacagcctgagatcaggcgagcagcggaatctagctcatcacgcccgtgcgtggacgcct
gatagatgccagggagccaggaactccgtttcaccgcggagtaaaagcagcccgctgtcc
tctgacagtcgcctgtggctcgaggagaataaacacagacacgaaggctgtaaggtgaat
gcggatgccaacaggctgagccatgctggatcgcggccttccctgtcccacggcggccca
cagtatcctcagatagccatgaacagctgcaagtacaatgggggcatagtcagaccactc
ggcagtctgggggcgtcccggaggaacctagcagagctggactctgagacacagcctttg
cagaccctgcacacttccggcctggaggtggtggtctccaaagggaacggggaagaccct
agtaagcagtccagcgagaacctcgtgaggcaaagaccatgcagcgctccgcataagaag
aacaaggacattggctataagctcggccaccggagggcgctgtttgagaaacgcaagcgc
cttagcgactacgccctgatttttggaatgtttgggattgttgtcatggtgacggagacg
gaactctcctggggagtttatacaaaggaatcctcatattcatttgcactgaaatgcctt
attagcctctccactgtaattctgctctgtctgatcattatgtaccacgcacgagagatt
cagcttttcatggtggacaatggagcagatgactggcggatagccatgacgtacgagcgt
atcctcttcatcgttttggagctgctggtgtgtgccatccaccccattccaggtcagtac
gtcttcacctggaccgcccgcctggccttcacctacacgccgtctgtggcggatgcagac
gtggacatcatcctctccatccccatgttcctgcggctgtatctgattggccgggtcatg
ctcctgcacagtaagctctttacggacgcctcgtcacgcagtatcggagccctcaataag
atcaactttaacacacgctttgtcatgaagactttgatgactatctgcccaggcacagtc
ctgctggttttcagcatatcatcatggatcattgctgcctggactgtgcacgtctgtgag
agataccatgataaagtggaagtcaccagtaacttcttgggagccatgtggctgatctcc
ataaccttcctgtctattggttatggagacatggtgcctaacacatactgtgggaaggga
gtgtgtctccttactggaatcatgggggccggctgcactgccctagtggtggctgtcgta
gccaggaagttagagctcaccaaggctgaaaagcatgtccataactttatgatggacact
caactctgcaaaagagtgaaaaacacggctgctaatgtactcagggaaacatggctcatc
tacaaacacacaaagcttgtgaagaagattgaccatgccaaggtccggaaacatcagcgc
aagtttctgcaggccattcaccaactgcgaagtgtgaagatggagcaaaggaagctgaat
gatcaagcgaacacgctggtggatttagcaaagacacagaatgtgatgtacgacctggtc
tcagagctgcaggagcgcagtgaggagctggaaaagcggatcggtcacctagaggcaaaa
ctggactccataaacagcagtctgcaggctctgcctggcctgctctcacaagccatacag
cagcaacagcaccacctgctggacgggctgacccagcgcggattcaccctcacacgaccc
tcctcgcagacctccgaacgctcctgggcgtcctccgtgcaccgacggagatcaccctct
accgcaccacacacgtcctccgatagcggctag
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