Labeo rohita (rohu): 127170196
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Entry
127170196 CDS
T09007
Symbol
ncor2
Name
(RefSeq) nuclear receptor corepressor 2 isoform X1
KO
K06065
nuclear receptor co-repressor 2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127170196 (ncor2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127170196 (ncor2)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
127170196 (ncor2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
DnaT
Motif
Other DBs
NCBI-GeneID:
127170196
NCBI-ProteinID:
XP_050973975
LinkDB
All DBs
Position
8:complement(12830339..12942712)
Genome browser
AA seq
2416 aa
AA seq
DB search
MSSHPQPVPQGRRAVDARHLPSPATLPLQLRAHADVGGLVDYHPHARDYASHLPHGSLAQ
PHRRRPSLLSEFQPGSERGQEPHIRYEHIYLQDPSSQSEVEYSEMKRPRLEIGADSLIRH
STHRQPLTVGGAEEMAKEHSSSSSSIGKIEPISPVSPVPMEPDLDLVPSRLSKEELIQNM
DRVDREITMVEQQICKLRKKQQQLEEEAAKPQEPERTISPPPSEAKHRSLVQIIYDENRK
KAEEAHRILEGLGPRVELPLYNQPSDTKQYHENIKINQAMRKKLILYFKRRNHARKQWEQ
KFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRELQERMQNRVAQ
RGGGLASAARSEHEVSEIIDGISEQENSEKQMRQLAVIPPMLFDAEQQRIKFINMNGLMD
DPMKVYKDRQVMNMWSEQEKDTFREKFIQHPKNFGLIASFLERKTVAECVLFYYLTKKNE
NYKNIVRRSYRRRGRSQNNQQAQQQVNRNNQEEKDEKEKEKEGDREEDKTEGDEKEDGMK
DDTSGEDGEEKEPPVTAKGRRTANSRGHRKGRVTRSMTNEQEENTSPLSSELANLEMNES
SRWTEEEMETAKKGLLQYGRNWSAIAKMVGSKTVSQCKNFYFNYKKRQKLDEILQQHKIK
SEKERKARRKGKALQNEEASAPSAAEEEEMEGSGVSGNEEEAQEDGEGGANNSSDTESLP
SPRSSDDSKVKEEGSARPKTAPNATSSSSSSDKDMAAMETGPDEKPKVERGEGEPAGVKQ
EVKTEPMECGKEAAGEDKKPPALEVEDCKKEVKKKEHGGKSGAQDSDSSATCSADEVEET
ESSDKNRPSLLSFAHDGVISSPVQKPLDLKQLKQRAAAIPPIMPEVSVAGRDNRPGLLGK
QQVMPHALALYQQQITMAHESSQEAKQQQQQPTKSQHNTGGGESSSPRVRTRSPGVSDRD
REELEGNERWLQALLHGLHKSRAFSPLADGKKIPGADDMRAVGLGRPVMSPYQLSPRDMA
KLSHEQLLHYNPSLAPNLQPQERMAAVRPLHIPEPPPLISSAKPGGSITQGTPVQLHNPS
HGSDHGKIPAPGSLALSWMDQRKMGGFPVVKQEQLSPRGAASSQAENLSSQDGATSRGPM
PAVQGGSITKGIPGTRVHQEPSISYRGGSITQGTPADVLYKGTITRLITEDSPSRERGRE
DTPTKGHVVYEGISGHILSFDRGPNSKEEGRGDMAGLKRTYDMMEVGMSRVPPIRDSLSA
AEGLISRAMPHERDSPHLHHIRGSISQGIPRDDCQRREVKQMKREGSPSPRGPGHPTDAL
KSRAHDSMVTTVKEGGRSIHLIPPEGVVIGKPKEGSITQMCFLQGTPMKQEPAGSSKRHD
VRSIIASSPRPYSGLPSHLELRPEHRGSDRARYEEAGGKSRPSAVVSTASSLSRTSPLAL
SGEQSSRSHHSPVGYEDHKRSSYPPPSHRASPLSGRESSQRAHEGSSKAQQQERKATPTP
REVSSTKSPLAVEHTASLAYERIMQGLGTDMYRGQIPLTFDPASLPRGIPIEPAYYLPRH
LAPAPGYPHPYPPYLIRGFPETAALENRQTLFNDYITSQQMHQWPAAAAMAAQRPDLLRG
LTPREQSLNLAYSPTPRGTSASPMDRITYIPGTSPAFPSGAYNTSPISPVGASHMSKIQG
SSTSSERERERERERERERERERERERERERERERERDRERERERERDRDRERDRERDRE
REREKDRDRDRERDKSLGHGNVEHAPIWRPGAPEQMGGGSSSSSRPPSHPYSHQSSPLSP
RPQDNLQQRPSVLHNTSSKSLPNSEHNSPSVLRPPGSARYQGFSGHLRSGLANEGYPSGT
DSNAKDLNRDGGKSHGRGGLPKHQDLSSSSKSDPKLASPGGSYPSPYSQAPGAHLGLPTS
RGHPLLASESNSGSSSIPSRGGDGISSASSREKTQNKVMSIQEHELRALGKTTMTAANFI
NAIIMHQISCDAAMPETGALATNGACDAHHKALEQLYGCEDRLSPGQQPPSAVKSSQRVV
TLAQHISEVITKDYTRQSQQGQIGGQSSLQPVFGYHNSPVLDLTRPPSAPQAQTPTDPNA
RYTPEGSAAERERGRDRSPPQSKASPVSLAADGIEPVSPPGAVSEPETPGAAYPNEQAEQ
GMGSRSPASSSQPPAFFSKLTESNSAIVKSKKEMIKKMVVSAEAEFNQGQPGTEIFNMPA
STNAGPVSVRSHPAPEASGNTIGLEAIIRKALMGKYDEQMDDRSPSNSVNSMSVPAAVGP
PASVDGRSEDPYGLPVKSKGGRSNGRKTKSPGPGLSGGERPSSVSSVHSEGDCNRHTPLT
NRVWEDRPSSTGPTPFPCNPLTMQMRLPSGMMSGPSPSPTQQGASAPPQGQNQPRAWEEE
PKPLLCSQYETLSDSE
NT seq
7251 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgcaccctcagccagtgcctcagggtcggagggctgtggacgctcgtcacctt
cccagtcccgccacccttcctctgcagctgagagcccatgcggatgttggtggactggtg
gactaccatcctcacgctcgggactacgcttcccatctgccacatggatcactggcccag
cctcaccgccgcagaccgtctcttctgtctgaatttcaaccaggcagcgaaagaggtcaa
gagccccacatccgatatgaacacatttacctacaggaccccagcagccaatcagaagtg
gagtactcggagatgaagcgtccacgcttggaaatcggggcggattctcttattcgtcat
tcaactcatcgtcaacccctcactgtgggtggagcagaggaaatggctaaggagcacagc
agcagcagcagttccattggaaagattgagcccatctctcccgtgagtccagtgcccatg
gagcccgacctggacctcgttccctctcgcctctccaaagaggagctaatccagaacatg
gaccgtgtagatcgggagatcaccatggtggagcagcagatctgtaaactgcgtaaaaaa
cagcaacagctggaggaagaagctgcgaaaccccaggagccagagcgcaccatctcgcct
ccacccagtgaagccaaacaccgcagccttgtccagatcatctatgatgaaaacaggaaa
aaggctgaggaggctcatcggatcctggagggactcggaccccgagtagagctgcctttg
tacaaccagccgtctgataccaagcagtaccatgagaacatcaagataaatcaggcaatg
aggaagaagctcattctgtatttcaaaagaagaaatcatgctcgcaaacagtgggaacag
aaattctgccagcgctatgaccagctaatggaggcctgggagaagaaagttgagcgcatc
gagaataacccacgccgcagagccaaagagagcaaagtgcgggagtattacgaaaaacag
tttcctgagatccgtaaacagagggagctgcaggagcgcatgcagaatagagtggctcag
cgaggtgggggcttggcctcagcagcccgcagtgaacatgaggtttctgagatcattgat
ggaatctcagaacaagagaactcagagaagcagatgcgtcagttagctgtgattcctccc
atgctgtttgatgccgagcagcagaggataaagttcatcaacatgaacgggctgatggac
gatccaatgaaggtctacaaagacagacaggtcatgaacatgtggagcgaacaggagaag
gacactttccgtgagaagtttatccagcacccaaaaaactttggcctgatagcctccttt
ctggagagaaagacggtggctgagtgtgtcctgttttactacctgactaagaagaatgag
aactacaagaacattgttcgcaggagctaccgtcgccgaggcaggagccagaataaccaa
caggcacagcaacaggtgaaccgtaacaaccaggaggagaaagacgaaaaggagaaagag
aaggagggagaccgtgaggaggacaaaacagagggagatgaaaaggaggacggcatgaaa
gatgacacctctggtgaggacggggaggagaaagagcctcccgtaaccgctaaaggccgg
cgcaccgcgaacagccgcggacaccggaaaggacgggtcactcgctcaatgaccaacgag
caggaagagaacacttcgccgctaagcagtgagctggcaaacctggagatgaatgaaagc
tctcgctggactgaagaggagatggagacagcaaagaaaggtctgctccagtatggcaga
aattggtccgctatcgccaagatggtgggctccaaaacagtctcccagtgcaagaacttc
tactttaactacaagaagagacagaaactggatgagattctgcaacagcataaaataaaa
tcggagaaagagcgtaaagccaggcgtaaaggtaaagctcttcagaacgaggaggccagc
gctccatctgctgcagaggaagaggagatggagggatcgggagtcagcggcaacgaggag
gaggctcaggaggacggagagggtggagccaataacagctcagacaccgagagcctccct
tccccacgctcctcagatgacagcaaggtcaaagaagagggctcggcacggcccaaaact
gcacccaacgccacttcctcctcatcctcctcggacaaggacatggcagctatggagact
gggccggatgaaaagccaaaagtggagagaggagaaggcgagccggcaggagtaaagcag
gaggtaaagaccgaaccaatggagtgtggtaaggaggcagcaggagaagataagaaacct
cctgccctggaggtggaggactgcaagaaagaggtcaagaagaaagagcacggaggaaag
agcggagctcaagacagcgactccagcgccacatgcagtgccgacgaggtggaggagact
gaaagctccgacaagaacaggccgagtttgttgagtttcgcccatgatggagtgatctct
tctccagttcagaaaccgctggacctcaaacagctcaagcagagagcagccgctatacct
cccataatgccagaggtgtcggtagcaggacgtgataaccgacccggtttgctggggaag
cagcaagttatgccccacgctcttgcactgtaccagcagcagattaccatggcacatgaa
tcttcccaagaggccaaacagcaacaacaacagccaaccaaatctcagcataacacaggg
ggcggagaatccagcagcccacgggtcaggactcgcagccctggtgtctctgacagagac
agagaagagctggaggggaacgagagatggcttcaggctctgctacatggattacataaa
tctcgggcgttctctcctcttgcggatggtaaaaagattcccggggctgatgacatgcgg
gctgtaggtctaggccggccagtgatgtcaccgtaccagctctctcccagagacatggcc
aaactcagccatgaacagctgctacactacaatccctcattggctccaaatctacagcca
caggaaagaatggctgcagtgcggcctctccatatcccagaaccccctcctctcatctcc
tctgccaaacctggtggttccatcacgcagggtactccagtgcagttgcacaacccatct
catggctccgaccatggaaaaatcccagcaccaggatccctggctctctcctggatggac
cagaggaaaatgggagggtttccagtggttaaacaggagcagttgtctccacgcggggcc
gcctcctctcaggctgagaatctctcgtcacaagacggcgctacgtcaaggggccccatg
ccagctgttcagggtggcagcatcacgaaaggcatccctggcacacgtgtgcaccaagaa
ccttccatatcttatcgaggaggttctatcactcagggcactcctgcagatgtcttgtat
aagggcacaataacccgtctgatcactgaggacagccccagcagagagagaggcagagaa
gacactcctactaagggacacgtagtctacgaaggcatcagtggacacatcctttccttt
gaccggggtccaaattccaaggaagagggtcgtggggacatggctgggctgaagaggacc
tatgacatgatggaggttggcatgtctcgtgtgccacccatcagagactcactatctgct
gctgaaggcttgatcagtcgagcaatgcctcacgagcgtgatagtcctcatctacaccac
atccgtggatccatatcccaaggaatcccacgggatgactgtcagcgccgggaggttaaa
cagatgaaaagagagggttccccatcaccccgtggccctggtcatcccaccgacgctctt
aaatcgcgcgctcatgatagtatggtgaccaccgtcaaagaaggaggccgctccattcac
cttatccctccggagggggtcgtgataggcaagcctaaggagggctcaatcacacagatg
tgttttctacagggcactcctatgaaacaagagcctgctggctcatccaagcgtcacgat
gtgcggtccatcatcgccagctctcctcgcccttactctggactgccctctcatctagag
ctcaggcctgagcacagaggctccgacagggcccgctatgaggaggcggggggcaaatcc
cgacccagcgctgtggtcagcacggccagctctttgtctcgtacttctccattggcactg
agtggagagcagagcagcagatctcaccacagtccagtgggctatgaagatcacaagaga
tccagctaccctccgccctcacacagagcctctccactgtcgggcagagaatcctcacag
cgtgcacatgaaggctctagcaaggcccagcagcaggagagaaaagccactcccactcct
cgagaggtgagctccactaagtctccactggcagttgagcacactgcatctttggcctac
gagaggatcatgcagggactgggaactgatatgtaccgtggccagatacctctaacattt
gaccctgcaagtctgcccaggggaatccccattgaaccagcgtattacctgccccgtcac
ctggcccctgcccctgggtaccctcacccctacccaccctacctgatcagaggtttccct
gaaacagcagccctggagaacagacaaacgctcttcaacgactacattacctcccagcag
atgcatcagtggccagccgctgctgccatggctgctcaaagacctgatttgctcagaggc
ctcacacctcgagagcagtcccttaacttagcctactcacccacacccagaggaacatct
gcatctcccatggatcgtatcacatacatcccaggaacctctccagcttttcctagcgga
gcctacaacacctctcctatctcaccagtgggagcctctcacatgagcaagatccaaggc
agttcaacgtcctcagagagagaaagagaaagagaaagagaacgagaacgagaacgggag
agggagagggagagggagagagagagagaaagagagcgagaaagagagagggatcgtgag
agagagcgagagcgagaacgagaccgagatcgagagagggacagggagcgagaccgggaa
agagagcgtgagaaagatcgggacagggacagagaaagagacaagtccctcggtcatggt
aacgtggaacatgcccctatatggagaccaggagcaccagaacagatgggtggtggcagc
agcagcagttctcgtcccccgtctcatccatacagtcaccagtcgtccccgctctcccct
cgtccccaggacaacctgcagcagagacccagcgttctgcacaacaccagctcgaagagc
ctccccaattctgagcacaacagtccctctgtgctgcggccaccaggctctgctcgctac
cagggctttagtgggcaccttcggtctggtctagccaatgagggttacccatctggtaca
gactcaaatgctaaagatttgaacagagatgggggcaaaagccatgggcgtggaggtctg
cccaaacatcaggacctttcatcctcttccaagtctgaccccaagctggctagccccggt
gggtcgtacccctctccgtacagccaggcccctggtgcccacctcggtctgcccacgagt
cgagggcaccccttgctggcttccgaaagcaacagcggcagcagttccatcccgtcccgt
ggtggggatggcatcagcagcgcgtcaagtagggaaaagactcaaaacaaagtgatgtcc
atacaggaacacgaacttcgagcactcggtaagaccaccatgacagcggccaacttcata
aacgcgataatcatgcatcaaatttcttgtgatgcggcgatgccagagactggtgcgctc
gcgaccaacggcgcctgtgatgctcaccataaggcactagaacagctgtacgggtgtgag
gacagactttctccaggacagcagccgccttctgccgtcaaaagctctcagagagtggtc
accctcgcccagcacatcagtgaggtgatcactaaagactacacacgccagtctcagcaa
ggccagatagggggtcagtcatctctgcagcctgtgtttggatatcacaactcccctgtg
ctggatctcacccgtcctcccagcgcaccccaagcccagacacccacagaccccaacgcc
cgctacaccccagaaggctctgctgctgagagggagagagggagagacaggtctcctcct
cagagtaaggcctctccagtgagtcttgctgccgacggaattgaacccgtttcaccacca
ggggccgtttcagagccggagacaccaggagccgcctaccctaatgaacaagccgagcag
ggtatgggatctcgttctccggccagtagctctcaaccaccagccttcttcagtaaactg
actgagagcaactctgccattgtcaagagcaagaaggaaatgattaagaagatggtggtc
agcgcggaggctgaattcaaccagggccaacctgggacagaaatcttcaacatgcctgcc
tctacaaatgcaggacccgtgagcgtgcggagtcatcccgcaccagaggccagtggtaat
actataggtctggaggctatcatcaggaaagccctcatgggcaagtatgatgaacagatg
gacgatcgctcaccatccaactcagtcaactcgatgagtgtgccagctgctgtcgggccg
ccagcttcagtggatgggcgttctgaagacccttacggcctgccagttaaatccaaagga
gggcgctccaacggtcgcaagactaagtctcctggtcctggtctgtcaggaggagagaga
ccttcatctgtgtcctctgtgcactctgagggagactgtaaccgtcacaccccactcacc
aacagagtgtgggaggacagaccctcatctacaggccccactccattcccctgtaacccc
ttgaccatgcagatgcgcctccccagcggtatgatgtcgggaccctcgccttctcctacg
cagcagggcgcgtcagcacctccgcagggtcagaatcaaccccgcgcctgggaggaagaa
cccaaacctctgctgtgctctcaatacgagaccctgtccgacagcgagtga
DBGET
integrated database retrieval system
