Labeo rohita (rohu): 127170216
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Entry
127170216 CDS
T09007
Symbol
sec22bb
Name
(RefSeq) vesicle-trafficking protein SEC22b-B
KO
K08517
vesicle transport protein SEC22
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04130
SNARE interactions in vesicular transport
lroh04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
127170216 (sec22bb)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127170216 (sec22bb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127170216 (sec22bb)
Membrane trafficking [BR:
lroh04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
127170216 (sec22bb)
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GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
127170216
NCBI-ProteinID:
XP_050974007
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Position
8:complement(23679840..23685701)
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AA seq
215 aa
AA seq
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MVLLTMIARLADGLPLAASMQEDEQMGRDLQQYQSQAKQLFRKLNEQSPNRCTLEAGSMA
FHYVIEKGVCYLVLCEAGFPKKLAFAYLEDLQAEFHEQHGKKVPTVSRPYSFIEFDTYIQ
KTKKSYIDSRARRNLSNINTELQDVQRIMVANIEEVLQRGEALSALDSKASNLSSLSKKY
RSDAKYLNTRSTYAKLAAGGVFFIMLIVYIRFWWL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcctgacaatgatcgcacggctggcggacggattgccgctggcggcttcaatg
caggaggacgagcagatgggtcgagatctccagcaatatcagagccaagccaaacagctc
ttccgcaaattaaacgaacagagtccaaaccgatgcaccttagaggctggatcgatggcc
tttcactacgtcatagagaaaggcgtttgctatctggtcctctgtgaggccgggtttcct
aaaaagctagcctttgcttatctggaagatctgcaagcagagtttcacgaacaacatggc
aagaaggtgcccacggtctccaggccctactccttcatagagtttgatacttatattcag
aagaccaaaaagtcatacatcgacagcagagcgcgcaggaacctgagcaacatcaacaca
gagcttcaggacgtacagagaatcatggtggccaacatagaagaagttctgcaaagggga
gaggccttatctgcgttggactcgaaggcaagcaacttgtctagcctgtccaagaagtac
agaagcgacgctaagtacctgaacactcggtccacgtatgctaagctagcggctggtggc
gtcttcttcatcatgctgatcgtgtacatacgcttctggtggctgtga
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