KEGG   Labeo rohita (rohu): 127170242
Entry
127170242         CDS       T09007                                 
Symbol
polb
Name
(RefSeq) DNA polymerase beta
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    127170242 (polb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lroh03400]
    127170242 (polb)
Enzymes [BR:lroh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     127170242 (polb)
DNA repair and recombination proteins [BR:lroh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     127170242 (polb)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     127170242 (polb)
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_lambd_f HHH_8 DNA_pol_B_thumb HHH_5 NTP_transf_2 HHH_2 Cdd1
Other DBs
NCBI-GeneID: 127170242
NCBI-ProteinID: XP_050974043
LinkDB
Position
8:32664108..32668833
AA seq 373 aa
MLRLCPAVLDICSAVVLDGKKSKINIFIHTYFRLFSTMSKRKAPQETLNEGITDFLIELA
NYERNVNRAIHKYNAYRKAASVIAKYPQKIKSGTEAKKLDGVGAKIAEKIDEFLATGKLR
KLEKIRSDDTSSSINFLTRVTGIGPAAARKFYDEGVRNLEDLKKIEHKLNHHQQIGLKYF
EEFEKRIPRAEMQKMEALILKELDLVDPEYIGTICGSYRRGAESSGDIDILLTHPDFTSQ
SEKQPKLLHAVVDHLESIGFITDTLSKGDTKFMGVCQLNKEEDDEEEHFHRRIDIRLIPK
DQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTIRPLGVTGVAGEPLLVDSEKDIFDY
IQWKYREPKDRSE
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgctaaggctttgtcctgcagtgttggacatttgctcagctgttgtcttggatggtaaa
aagtcaaaaataaacatatttattcacacatattttagattattctcaactatgagtaaa
agaaaggcgccacaggaaactttgaacgaaggaatcacagattttctcatagagttggca
aattatgagagaaatgtcaacagagccatccataaatacaatgcttacagaaaagcagca
tcggtgatcgccaaataccctcagaagatcaaaagtgggacagaagcaaagaaactggat
ggagttggtgcaaagatagctgagaaaatcgacgagtttttggcgacaggaaaactgcgc
aagctggaaaagattcgcagtgacgacacaagctcctccatcaacttcttaaccagagta
actggaatcggtcctgctgcagccaggaagttttatgatgaaggcgtcaggaacttagaa
gatctgaagaagattgaacacaaactcaaccaccatcagcaaatcgggttaaagtacttt
gaagagtttgagaagagaatccctcgtgcagaaatgcagaaaatggaggctctgatactg
aaggaactggatctggtggatcccgagtatattggcaccatctgcggcagctacagacga
ggagccgagtcgagtggtgatattgatatactgctgacccatccagacttcacctctcag
tctgagaaacagccgaaactccttcatgctgttgtggatcatctggagtccatcggcttc
ataactgacacgctttctaaaggagacactaagtttatgggtgtgtgtcagctgaataaa
gaagaggatgatgaggaagagcattttcaccgccgtattgacatcaggcttattccaaag
gatcagtattactgcggtgtgctgtacttcactggcagtgacatattcaacaaaaacatg
aggactcacgcactagagaagggcttcactctcaatgaatacactatccgtccactgggc
gtcactggtgtggctggagagcctctgctggtggacagtgagaaggacatctttgactac
atccagtggaaatacagggaaccgaaggatcgaagcgagtga

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