Labeo rohita (rohu): 127170301
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Entry
127170301 CDS
T09007
Symbol
lgi3
Name
(RefSeq) leucine-rich repeat LGI family member 3
KO
K19999
leucine-rich repeat LGI family member 3
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127170301 (lgi3)
Membrane trafficking [BR:
lroh04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
127170301 (lgi3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_5
LRR_4
LRRCT
LRR_1
LRR_9
LRR_14
Motif
Other DBs
NCBI-GeneID:
127170301
NCBI-ProteinID:
XP_050974122
LinkDB
All DBs
Position
8:complement(6020900..6037434)
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AA seq
551 aa
AA seq
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MVEARPRRTLQWPDWRLSVCVLLFCMFGMAAGRKAPKTPRCPATCSCTKDSAFCVDTKAI
PKSFPPGIISLTMVNAAFTEIPEGAFSHMQLLQFLLLNSNTFSLISDDAFAGLGHLQYLF
IENNDIQALSKHTFRGLKSLTHLSLSNNNLQVLPRDLFKHLDILTDLDLRGNSFRCDCKI
KWLVDWMEKTNTSVPAIYCASPFEFQGRRIHDLTPRDFNCISADFAVYETYSFQSLSVES
YEFNDDQYVVFAQPNTGICTVFIWDHVNMLFKTHYNITSRSAVYCKPVVINNTLYMVVAQ
LFGGSHIYKWEEGPLRFVKIQDIDTTRVRKPNFIETFQIDGDWYFAVVDSSKAGSTSLYR
WNSNGFYSHQSLHPWHRDTHIDFLEVDGKPRLILSSASQPPVVYQWNRSQRQFAYHSQIT
DSGDVQMVKHFWVRKVLYLCLTRFIGDSKILRWDNQRFVEIQTLPSRGSMAVYPFSVGVR
QYLLLGSDYSFSRIYLWDDLTQRFQPFQELNMLAPRGFSLISIDNKDILLAASFKGKTMA
YQHLVVDLSAK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggtggaagcaaggccaagacggaccctacaatggccggactggcggctgtctgtttgc
gtgctgcttttctgtatgtttgggatggcagcgggccgcaaagctccaaaaacacctcga
tgtccagccacctgctcctgtactaaagacagtgccttctgcgtggacaccaaagctatt
cccaagagcttcccaccaggaatcatctccctgactatggtgaacgctgctttcacagaa
atccctgaaggagctttttcccacatgcagctgctgcagtttctgctgttgaactcaaac
acattctctctgatttctgatgatgcttttgctggtcttggacatctacagtacctattt
attgagaacaacgacatccaggctctgtcaaagcacacatttagaggactgaagtctctg
acacatctgtctctgtccaacaacaacctgcaggttcttcccagagatctcttcaaacac
ctggatatcctcactgacctagatctgcgagggaactcgttccgttgtgactgtaagatc
aaatggctggttgactggatggagaagaccaacacctcagttccagccatatactgcgcc
agtccgtttgagttccagggtcgacgcatacatgacctcacaccacgcgacttcaactgc
attagcgcagattttgcggtatatgagacatactcgttccagtctctgtctgtggagtca
tatgagtttaatgatgaccagtatgtagttttcgctcagcccaacactggaatctgcacc
gtgttcatttgggatcatgtgaacatgcttttcaagacacattacaacatcacatctcgt
tctgctgtgtactgtaaacctgtggttatcaacaacactctctatatggttgtggctcag
ctctttggaggatcccacatctacaaatgggaggaaggtccattgcgttttgtcaaaatc
caggacatcgacaccacccgtgtgcgtaaacccaacttcattgagactttccagattgat
ggagactggtattttgcagtagttgacagctcgaaagccggttccaccagcctgtaccgc
tggaacagcaatggcttttactcacaccaatccctccatccctggcacagagacactcac
atcgacttcctagaggtggacggcaaacctcgcctcatactctctagcgcctcgcagccc
cctgtggtgtatcagtggaaccgcagccaacgccaattcgcctaccactcgcagatcacc
gattcgggtgacgtgcagatggtgaagcacttctgggtacggaaagtgctgtatctctgc
ctcacacgctttataggagactcgaagatcctgcgctgggacaaccaacgcttcgtagag
attcaaaccctgccgtcacggggctcaatggccgtgtatccattcagcgtcggtgtgagg
cagtaccttctgctgggcagcgattattcgttctctcggatctatctgtgggacgacctc
actcaaagattccagcccttccaagaactcaacatgctcgcccctcgaggctttagcttg
atctctattgacaataaggatattctgttagcggctagttttaaaggaaagaccatggcc
taccagcatctagtggtggacctcagtgccaaatag
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