Labeo rohita (rohu): 127170392
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Entry
127170392 CDS
T09007
Symbol
usp9
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127170392 (usp9)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127170392 (usp9)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127170392 (usp9)
Peptidases and inhibitors [BR:
lroh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127170392 (usp9)
Ubiquitin system [BR:
lroh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127170392 (usp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Dsc3_N
DUF2259
DUF2014
Motif
Other DBs
NCBI-GeneID:
127170392
NCBI-ProteinID:
XP_050974210
LinkDB
All DBs
Position
9:22550324..22587590
Genome browser
AA seq
2606 aa
AA seq
DB search
MTATTRGSPVGGNDGQGQAPDGQSQPPLPQNQTSSPNSSNENSPVSPPDDQGQGDSPTPL
EEEEPAFPHTELAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLCKKGLDVKCEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNAHRLVELCVTKLSQDWFPLLELLAMATNP
HCKFHIYNGTRPSETVPAGVQLAEDELFARPPDPRSPKGWLVDLINKFGTLNGFQILHDR
FMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKESWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKMQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKIPINLLKSLE
GQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMENMRQFSKEHTDFDPQTVRPGSR
YSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLMGD
EPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLE
LIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQANQVEIHEDFIQSCFDRLKASY
DTLCVLDGDKDSINCARQEAIRMVRVLTVLREYITECDSDYHEERTILPMSRAFRGKHIT
LVVRFPNQGRQVDDLDIWSHTNDTIGSVRRCILNRIKANSTHTKIELFIGGEIIDPADDR
KLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLP
GVIMSLHLRYISFLWQVADLGCNLNMPLLRDGARVLMKLMPPDNTTVENLRAICLDHAKL
GENSLSPTLDSRFFGPSPSQVLYLIEVVYALLMPASGTLGEDASDFQYNFLKSGGLPLVL
SMLTRNNFLPNADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPVVEGTIPVSPI
NQTTHDQALVLQNALQNIPNPSAECMLRNVAIRLAQQISDENFFQASKYIPDICVIRAVQ
KIVWASGCGSVQHVFSSNEEISKIYEKTNAGNGPDAEDEQVCCEALEVMTLCFALMPTAL
DALSKEKAWQTFIIDLLLHCQSKSVRQMAQEQFFLMATRCCMGQRPLLFFITLLFTVLGS
TAKERAKHAADYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGEPGVE
ETILEGHIGVTKELLAFQTPEKKFYIGCEKGGASLIKELMDDFLFPASNVYLQYMKSGEF
PTEQAIPVCSTPATINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCEPLTEWEYLPPV
GPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGSDVDDDMSGDEKQDNE
SNVDPRDEVFGYQHQFEDKPSLSKSEDRKEYNIGVLRQLQVIFGHLASSRLQYYVPRGFW
KQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCP
HRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKK
LPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGSDVHPENQQQV
IQQNEPSEPEPPCSSRYRLVGVLVHSGQASGGHYYSYIIQRNGSGGEGERNRWYKFDDGD
VTECKMDDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTLDKDSE
LVKYITELTVTSKPHQVKMPSAIERSVRKQNVQFMHNRMQYSLEYFQFIRKLLTCNSVYL
NSPPGQDHLLPEAEEMAMISIQLAARFLFSTGFHTKKIVRGPASDWYDALCILLRHSKNV
RYWFAHNVLFAYPNRFSEYLLECPSAEVRGAFSKLIVFIAHFSLQDGPCPSPIASPGPSS
QSCDNLSLSEHLFRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLGVPAT
FMLVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVTSRMQSSINGNPPLPNPYGDPNI
TAPIMPLQQLVVDILFVRTSYVKKIIEDCSNSEDTIKLLRFCCWENPQFSSTVLSELLWQ
VAYSYTYELRPYLDLLLQILFIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRA
YQCIKCMVALFSNCQVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNTQYTYNNWSP
PVQSNETSNGYFLERSHSARMTLAKACELCPEECHLTKHEVVSEEDAGRNPSSTQQLLPG
EVTGQQQHTEPDEQEALDEQDTSPPEDTALYPHSPGTKFQQQNNLPHTQPYTGPAAQHVN
NPQRPGPRAQENWEPPEEVPPSQTKD
NT seq
7821 nt
NT seq
+upstream
nt +downstream
nt
atgacggccacgacccgtggctctcctgtgggagggaatgacggtcagggccaggctccg
gatggccagtcccagccacccctgccccagaaccagacatcctctcccaactcatccaac
gagaactccccagtgagcccaccagatgaccagggacagggggactctcccactcctctg
gaggaggaggagccagctttcccccacactgaactggccaagctggatgacatgatcaac
agacctcgctgggtcgttccagttttgccaaagggtgaattagaagttcttcttgaagct
gctatagatctttgtaaaaaaggacttgatgtcaagtgtgaagcatgccagaggtttttc
agagatggcttgacaatatcctttacgaaaatactgacagatgaggctgttagtggatgg
aaatttgagatccatcggtgcatcattaataacgcccaccgactggtggagctgtgtgtg
accaagctctctcaggactggttccctctgctagaactcttggcaatggccaccaacccc
cactgtaagttccacatctacaatggtactcggccttctgagactgtgcctgctggggtt
cagctagctgaggatgagctttttgcccgtccacctgaccctcgctctcctaagggctgg
ttggtggacttaataaacaaatttggcacgttaaacgggtttcaaattctgcatgatcga
ttcatgagtggccaagctctgaatgttcagatcatcgctgcactcattaagccttttgga
cagtgctatgagtttctcactttgcacacggtgaagaagtacttccttcccatcatagaa
atggttccccagtttctagaaaacctcaccgatgaggaattgaaaaaggaagcaaagaac
gaagccaaaaacgatgccctgtctatgataatcaaatctttgaagaacctggcttctcga
gtgccaggacaagaggaaacagtgaagaatttagagatatttagattaaaaatgattctt
aggttattgcagatttcttcttttaatggcaaaatgaatgcactaaatgaagtaaacaag
gtgatttcaagtgtttcctactacacgcatcgtcacggcaatcctgaagaggaagagtgg
ctgacagcagagcgcatggcagaatggattcagcagaacaatattttgtctattgtgttg
cgagacagccttcaccaaccacagtatgtggagaaactggagaagatcctgcgattcgtc
atcaaagaaaaggccctaacgcttcaggacctagacaacatctgggccgctcaggctggg
aaacatgaggctattgtcaagaatgttcacgatctccttgcaaagttggcgtgggatttc
tcacctgaacagctggaccatctctttgactgctttaaggagagctggactaatgcgagt
aaaaagcagagagagaagttactggaattgattcgtcgactggcagaggacgacaaggat
ggtgtgatggctcacaaagtgctcaatctgctgtggaatttggctcatagtgatgatgtt
cctgtggatatcatggaccaggcccttagtgctcatatcaagattttggactatagctgc
tcccaggacagggacacacaaaagatgcagtggatagacagattcatagaagaattaaga
actaatgacaagtgggtgattcctgcactgaagcaaatacgggagatctgtagcctcttt
ggagaagccccccagaatttaagaaagaaaatacctattaacttactaaagagcttagag
ggtcaaacccagcggagcccacatgtcttctatcgacatgacctaatcaaccaactgcag
cacaaccatgcactggtcactcttgtagcagagaacctgtctgcatacatggagaatatg
aggcagttctcgaaagagcacacagactttgatcctcaaacggttaggccaggaagtcgg
tatagtcatgttcaagaggtccaggagcggcttaatttcttgaggttcttactgaaagac
gggcaactctggctatgcgcgcctcaggctaagcagatctggaagtgcctggcggagaac
gcagtgttcttgtgtgatcgggaggcctgcttcaaatggtactccaaactcatgggggat
gaacctgaccttgaccctgacatcaacaaggacttttttgagaacaacgtactgcagctt
gacccctcgctgctgacagagaacgggatgaaatgctttgaacgattcttcaaggcagtc
aactgcagggagggcaagctggtggcaaaacgccgggcatacatgatggatgacttggag
ctgatagggctggattacctgtggagggttgtgattcaaggaagtgatgatattgctagc
cgagcaattgacttgcttaaggagatttatacaaacctcggaccaaaattacaagccaat
caggtagagatccatgaggattttattcagtcttgctttgaccggctcaaagcctcctat
gacaccctgtgtgtgctggacggagataaagacagcattaactgtgccagacaggaggcc
atccgcatggtgagagtactgactgtgctcagggagtatataactgagtgtgacagtgac
taccatgaggagaggaccatcctgcccatgtccagggcttttcgaggaaagcatatcacg
ttggttgtgcgtttcccgaaccaaggccgacaggttgatgatctggatatttggtcgcat
actaacgacacaattggttctgtgcgacgctgcattctgaaccgaataaaggccaacagc
acgcacaccaagattgagctgttcattggtggagaaatcattgacccagctgatgacagg
aagctaattgggcagctaaacctcaaagacaaaactctcatcacagccaagcttacccag
gtcagcgccaatatgccttccagtccagacagctcctcagactcctccactggatcccct
gggaaccatggcaatcactacagtgatgggccaaaccctgaagtggagagctgtcttcct
ggcgtgataatgtccctgcacctgcgctacatctctttcctctggcaagttgcagacctg
ggctgtaatctcaacatgcctctcctgcgggatggagctcgcgttctaatgaagctcatg
cctccagataacaccacagtggaaaacctgcgagccatctgtctggatcacgccaaactt
ggcgaaaacagccttagccccactttggattcacgtttctttggaccatcaccatctcaa
gtgctttacttgatagaggtggtgtacgccttgctcatgcctgccagtgggacgctgggt
gaggatgctagtgacttccagtacaacttcttgaagagtggtggcctgccccttgttttg
agcatgctgaccagaaataacttcctgccaaatgctgacatggagacccggcggggagct
tatctgaacgcactaaaaatagccaagctgctgcttacagctgtaggctttggccatgtg
aaggctgtggcagaggcctgccagcctgtggtggaggggactatccctgtatcgcctatc
aaccagaccactcatgaccaggctctagttctacagaatgccttgcagaatatccctaac
ccctccgccgagtgcatgctgcggaacgtcgccatccgccttgcccaacagatctcggat
gagaacttcttccaggcctccaagtacatcccagatatctgtgtcattcgagcggttcag
aaaatagtctgggcttctggctgcggctcagttcagcatgtcttcagctctaatgaggag
atcagcaagatctacgagaagacgaatgctggcaatgggccggacgcagaagatgagcag
gtgtgctgtgaagctctggaggtcatgaccctgtgtttcgcccttatgcccactgcacta
gatgcacttagcaaagaaaaggcctggcagaccttcattatagatctgctgctgcactgc
cagagcaagtctgttcgccaaatggcccaagaacagttcttcctcatggccacccgatgt
tgtatgggccaaaggcctcttctcttcttcatcaccctcctcttcacagttttaggtagc
actgcaaaagagcgagcaaagcacgctgctgattacttcacgcttctaaggcacttactc
aactatgcatataacagcaacattaatcttcctaatgccgaagttctcttaaacaatgag
atcgattggttaaagcgcatccgggatgaagtgaagaggactggagagcctggggttgag
gaaaccattttggaaggtcatattggtgtcacaaaagagctactagctttccagacccca
gaaaagaagttctacattggctgtgaaaaaggaggtgctagtctcataaaggagttaatg
gatgacttcctgttcccagcatctaatgtgtacctgcaatacatgaagagtggagaattc
cccactgagcaggccatacctgtgtgtagcaccccagccaccatcaatgccggctttgaa
ctgctggttgcacttgccgtcggatgtgtgcgaaacctcaagcagattgtggacacacta
actgatatgtactatttaggttgtgaaccacttacagaatgggaatatttaccgccagtt
ggcccaaggcctaccaaggggtttgtcggtctgaaaaatgcaggtgcaacttgctacatg
aactcagtgatccagcagctctacatgattcctcctatcaggaatggcatcttggccatt
gaaggcacaggcagcgatgtggatgatgatatgtctggagacgagaagcaagataatgag
agtaatgtggatccccgggatgaggtatttggctatcagcaccagtttgaagacaaacct
tctctcagtaagtcagaagacaggaaggaatacaacattggggttcttcggcagttgcag
gtcatttttggacacttggcttcctccaggttgcaatactacgtgcctaggggattctgg
aagcagtttcggttgtggggtgaaccagtcaatctgagggaacagcatgatgccctggag
ttctttaactcactggttgacagtttagacgaggctttgaaagcattgggtcaccctgcc
atgctgagcaaagtactgggtggctcttttgctgaccagaaaatatgtcagggctgtcct
cacagatatgaatgcgaggaatcgtttacgacgttgaatgtagatatcagaaaccatcaa
aatctcctggattctatggagcagtatgtgaaaggagacttgcttgagggtgcaaatgcc
taccactgtgaaaaatgcaacaagaaggtggacacagtgaagcgtttactcattaagaag
cttcctccggtgctggccatccagctgaaacgcttcgattatgactgggaacgagagtgt
gccatcaagttcaatgattacttcgagttcccacgggagttagacatggagccctatacg
gtagctggagtagctaagctggaggggtctgatgtgcacccagaaaaccagcagcaggtg
atccaacagaatgagccatccgagccggaacccccctgcagctctcgttatcgtttggtg
ggagtgctggtccactcaggccaggctagtggaggtcattattactcctacatcattcag
aggaatggcagtggtggtgagggagaaaggaaccgttggtataagtttgatgacggtgat
gtcaccgagtgcaagatggacgatgatgaggagatgaagaaccagtgctttggtggagag
tacatgggcgaggtcttcgaccacatgatgaagcgcatgtcctacaggcgacagaagcgc
tggtggaacgcctacatcctcttttatgagcgaatggacacgttagacaaggacagtgag
ctggttaaatacatcactgaactcacagtgaccagcaaacctcaccaggtgaagatgccc
tctgctatcgaacgcagcgtgcgcaaacaaaatgtgcagtttatgcacaaccgtatgcag
tacagcttggagtacttccagttcatcaggaaactgctgacctgtaacagtgtctacttg
aactcaccgccaggtcaagaccaccttttgcctgaagcagaagaaatggctatgattagt
atacagctcgctgctagatttctcttcagtactggattccacaccaagaaaattgtccgt
ggccctgctagtgattggtatgatgctttgtgcatcttgctacgacacagtaaaaatgtg
cgctactggtttgcacacaacgtcctctttgcatatccaaaccgcttctctgagtacctg
cttgagtgtcccagtgcagaggttcgaggggccttctccaagctcattgtattcattgca
catttctccctgcaagatggaccctgcccttcacccattgcctcacctggaccttcaagt
cagagctgtgataatttgagtttaagtgagcacttattccgtgccgtgcttaatctgctg
agaagggaagtgtctgagcacggtcgtcacctgcagcagtacttcaatcttttcgttatg
tatgccaaccttggcttggcagagaagacgcagctgttgaagctcggggtaccagctact
ttcatgcttgtggctctggatgagggccccggccctcccattaagtaccagtatgctgag
ctcggaaagctctatactgtcgtctcacagctggtgcgctgctgtgatgtgacgtcccgt
atgcagtcctcaatcaacggaaaccctcccctgccaaacccatatggtgaccccaacatc
accgctcccatcatgcctctgcagcagctggtggtagacatcctgtttgtgcgtaccagt
tacgtgaagaaaattatcgaggactgcagtaactccgaggacactatcaaactgctgaga
ttctgctgttgggaaaaccctcagttttcctccactgtgctgagtgaactactgtggcag
gtggcatattcatacacgtatgagttaaggccttacctggacttgcttcttcagatcttg
tttattgaggactcatggcagactcacaggatccacaatgtgctgaagggaatccctgat
gaccgtgacgggctttttgacaccattcagcgctccaaaaatcactaccaaaagagagct
tatcagtgtatcaaatgcatggtggctcttttcagcaactgccaggtggcctatcagatt
ctccagagtaatggtgatttaaagaggaagtggacctgggcagtggagtggctcggtgac
gagctggaacggagaccatacactggcaatacccagtacacatataacaattggtcccct
cctgtccagagcaacgagacttctaatggatacttcctggagcgctcccacagtgcccgt
atgactttagccaaggcctgtgagttgtgtcctgaagagtgtcacttaacgaagcacgag
gtggtatctgaagaggacgctggccggaacccgtcctcgacacagcagcttttgccaggg
gaagtgacaggccaacaacagcacaccgagcctgatgagcaggaggcccttgatgagcag
gacacttctcctccagaggacactgctctgtaccctcactctccaggcacaaagtttcaa
cagcagaataacctcccgcatacgcagccgtacactggccccgcagcacagcacgtcaac
aaccctcagcgtccaggcccacgagcacaagagaactgggagccccctgaggaggtgccg
cccagccagactaaagactaa
DBGET
integrated database retrieval system
