Labeo rohita (rohu): 127170405
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Entry
127170405 CDS
T09007
Symbol
itga4
Name
(RefSeq) integrin alpha-4
KO
K06483
integrin alpha 4
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
lroh04514
Cell adhesion molecules
lroh04672
Intestinal immune network for IgA production
lroh04810
Regulation of actin cytoskeleton
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127170405 (itga4)
04514 Cell adhesion molecules
127170405 (itga4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127170405 (itga4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
127170405 (itga4)
04810 Regulation of actin cytoskeleton
127170405 (itga4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
127170405 (itga4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127170405 (itga4)
04515 Cell adhesion molecules [BR:
lroh04515
]
127170405 (itga4)
04090 CD molecules [BR:
lroh04090
]
127170405 (itga4)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127170405 (itga4)
Exosomal proteins of other cancer cells
127170405 (itga4)
Cell adhesion molecules [BR:
lroh04515
]
Integrins
Integrin alpha subunits
127170405 (itga4)
CD molecules [BR:
lroh04090
]
Proteins
127170405 (itga4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
FG-GAP_3
Integrin_A_Ig_3
DUF5370
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
127170405
NCBI-ProteinID:
XP_050974253
LinkDB
All DBs
Position
9:29453814..29492520
Genome browser
AA seq
1024 aa
AA seq
DB search
MTVNEMISSLPTRDLLKWRSVVGILWYLLSLCDCYNLDVERPLVFHGPNGSFFGYSVLLH
QHAEDTWLLVGAPQAESSFYPNIKNPGAVYNCSVWSSQCEQLPVGGVRQCGKHCLAENDN
QWLGVSLSRQPSKGHVLACGHRWKNIYYSSKDNQNKLPHGVCFRFSPDLKHANHIIPCYK
DHQRKFGEGYGSCQAGISNFFTEDLMVMGAPGTSYWTGSVLVYNTSSDISAAYVDDDSEV
LYGSYLGYAVSAGHFLDPQSTEIVGGAPQHEQTGKAYVFMVEGNTLKIVAQTKGKKLGSY
YGASVCAVDLNSDGLSDLLVGAPMFSSVREEGRVHVYINQGEAKLQEADFELVGSDSYAA
RFGETIVNLGDIDDDGFPDVAIGAPQEDDLRGAIYIYNGRRSGIARSFSQRITGSLLDSS
FGMFGQSVSGGVDIDSNNYPDVAVGAFLSDSAVVFRTRPVVKVDAVMMLPESLNRSIAQC
SENGLPAVCVNVKVCFRVGGKQIPGNIELKYNITADVHHKDGFPSRFYFSGNGTSNVTSG
RVKAKHDRITCATHQAFMKKDIRDIFTPIHFEVKYELGQHSVLHRDSGALPSLKPILQQK
DEQANVVKNQTVFARYCALQNCSTNLHVSAHLVLPQSYKNMPYFALGNGKSIMLNTTLLN
TGDDAFLPKLYLRFPSNLHFIRVLEEDKYISCEIAEENKVAVGLDCNVGNLYIAPFSKMN
ITFLLDVMQNSVTGNLSINISATSESFEDLDLQHDNVAVLTLPLRSAVDLNVYGFVSPTS
FLIGEEESVPVDCYPEKFNYTYKVMNMGPSKALDARVKISLPLMLVPYKYQLIRITDLQT
TLGYCFQRNNTVQIIDDCDVPKAFFIEEVVFYFSPKTKRTMFCGAEDMTCRMVECHFGDL
EVGKEVTITMEVELNPRVLQMSPGRHDVMVIQGIIDLISPAMDANTILLQEDVFDSVFLE
ALYSNKPVMAVQIFLIATSLIVGLIILALLVLMLWKCGFFERKLKEEKFDRDSWDYVPKK
ESVS
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgactgttaacgagatgatttcatcactacccaccagagatttgctgaagtggagatct
gtagttgggattctgtggtacctgttgagtctgtgtgattgctacaatctggatgtggag
cgtcctttagtttttcatggacccaatggatcatttttcggatactcggttcttcttcat
cagcatgctgaggacacatggcttctagttggagcaccacaggctgagtccagcttttat
cctaatatcaaaaatcctggagccgtctacaactgcagtgtgtggagctcccagtgtgag
cagctccctgttggaggtgtacggcagtgtggaaaacactgtttggcagaaaatgataac
cagtggctgggtgtgagtctgtcccggcagccctcaaaaggccacgttttggcatgtgga
catcggtggaaaaatatctactactctagtaaagataatcagaacaagctgccacatggt
gtttgcttcagattcagcccagatttgaaacatgccaatcatatcatcccctgctataaa
gatcatcaaagaaagtttggtgaaggttacgggtcatgtcaagcaggaatttcaaacttt
ttcacagaggacctgatggtcatgggagctcctggtacctcatactggactggatctgtt
cttgtctacaacacctcaagcgacatttcagctgcttatgtggatgatgacagtgaagtt
ctctatggcagttatttaggttatgctgttagtgctggacactttctagatcctcaaagc
actgagatagtgggtggtgctccccagcatgaacagactggtaaagcctacgtatttatg
gttgagggcaacactttgaaaattgttgcccaaaccaagggcaagaagcttggctcttat
tatggagctagtgtttgtgctgttgacctgaactcagacgggctgtccgatctgctggtt
ggggctccaatgttcagctcagtcagggaggaaggacgtgtacatgtctacataaaccaa
ggagaggctaaattgcaagaggcagactttgagttagtcggtagtgactcctacgcagca
agatttggagaaaccattgtgaaccttggtgatattgacgatgatggatttccagatgtg
gccatcggagcccctcaggaggacgatctgcgtggtgctatatatatctacaatgggagg
agaagtggtattgccaggagtttctctcaaagaataacgggctctttgttggacagcagc
ttcgggatgtttggccaatcagtgtctggaggagttgatattgatagcaacaattaccca
gatgttgcagtgggagctttcctgtcagactcagctgtggtgttcaggacacgtccagtg
gtgaaggtggatgcggtcatgatgttgcctgagagcttgaaccggtccatagcccagtgc
tctgaaaacggtcttcctgccgtatgtgtcaatgttaaggtgtgctttagagtcggaggg
aaacaaatcccaggaaacatagagctgaagtacaacataacagcagatgttcaccacaaa
gatggcttcccttctcgattttatttcagtggaaatggcacatccaatgttacatcgggc
agagtgaaggccaagcatgaccggatcacctgtgccacacaccaggccttcatgaagaaa
gacattcgggatatcttcacacccattcattttgaggtgaaatatgaacttggacagcac
agtgtgctacacagagactctggggccttgccttctctcaaacccattctacagcagaag
gacgaacaggccaatgttgtaaaaaaccagaccgtttttgccagatattgtgccttgcaa
aactgttcaaccaacctgcacgtttctgctcatctagttttaccacagtcctacaagaac
atgccatattttgctctgggtaatggaaaaagcatcatgttaaacaccacactgctcaac
actggagatgatgcttttctgcccaaactttacctgagatttcccagcaacttgcatttc
atcagagtgctagaggaagataaatacatcagctgtgaaatcgcagaggagaataaagta
gccgtcggactagactgcaatgttgggaatttatacatcgcccctttctcaaagatgaac
atcacctttttactagatgtgatgcagaacagcgtcacgggaaaccttagcattaacatc
agtgcaacgagtgagagctttgaagacctagatcttcagcacgacaatgtggccgttctt
acgttgcccttgagatctgcagttgacctcaatgtttacggatttgtctctccgacttca
tttctgattggagaagaagagtctgtgccggtcgactgctatcctgagaagttcaattat
acgtacaaggtgatgaatatgggtcctagtaaagctcttgatgcgagagtaaagatcagc
ttgccgctgatgctggtgccatacaaataccagctaatcagaattactgatttacagaca
actcttgggtattgcttccagaggaacaatacagttcagattattgatgactgtgacgtc
cctaaagctttctttattgaggaggtggtcttctacttctctccgaaaaccaagcgcaca
atgttctgtggtgctgaagatatgacctgtaggatggtggagtgtcacttcggtgacttg
gaggttggaaaggaggttaccatcactatggaggtggagctcaaccccagggttctccag
atgagtccaggcagacatgatgtcatggtgatacaaggcataattgaccttatttcacca
gcgatggatgccaacaccatcctactgcaggaagatgtttttgatagtgtgttcttggag
gctctgtacagcaataagcctgtgatggctgtgcagatttttctaatagcaaccagtctg
atcgttggactgatcattttagcactacttgtccttatgctctggaagtgtggattcttt
gagcggaagttgaaggaggagaagtttgaccgggacagttgggactatgtacctaaaaaa
gagagtgtgtcataa
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integrated database retrieval system
