Labeo rohita (rohu): 127170489
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Entry
127170489 CDS
T09007
Symbol
si:ch211-199f5.1
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127170489 (si:ch211-199f5.1)
Cell adhesion molecules [BR:
lroh04515
]
Cadherins
Protocadherins
127170489 (si:ch211-199f5.1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Hemotin
Motif
Other DBs
NCBI-GeneID:
127170489
NCBI-ProteinID:
XP_050974434
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All DBs
Position
9:35374337..35385087
Genome browser
AA seq
1001 aa
AA seq
DB search
MNSGTRRDSLRAQVMKMSRGLLFARILGVTLVCISQVVPEERTVRYKIYEEVRPPTVIGT
LASNVTWTPDKTRRTFPGIRFKLMSPSTGSFIRFRESDGRLTVEERVDRERICKRNPRCV
ITFDVAFVSAEQFELFHVEVEVLDVNDNSPEFPRAECTVEISENAALGTRIALDAAEDAD
VGSNSIQTYHLSENTHFSIDVITRVDGVKYAELVLVKELDREARAFFALKLVAADGGHPA
KSGATNVTVKVKDANDNSPMFDHSHYSVDVPEDTPVDSLLLDLNAVDPDEGLNGQVAYEF
GKQVTTKIRQLFKLDYKTGHLTLQSPVDYEDETTYEIDVQATDLGHNPVPSMCKIIINIR
DVNDNPPEIIITSITSVTDGVAHVSEATGPDILVALISIKDKDTGANGQVSCTLNGGHGN
FRLKRAYEGSYTIVTMAPLDREKIAEYNLTVVAEDFGVPPLRTVTNYLIRLTDVNDNAPT
FSAKIYEGFIEENQLPGTYITTILASDQDSGLNGEITYELFDSDTNSVSRFAIMNQAGNV
YALQSFNYEVTKRIDLRVQASDRGWPQLHNNAVLIINVVDQNDNAPSITQPTLVNGSAEI
QLPRDAPPGYIVTRIAAKDSDAGLNAELTYKLYDGGDLGFAIDPNTGEIYINRKIAYDEY
DLWKVLVTVNDNGHPSLTSTATIHFSLTESAPSNGNFYDEREDGEPKQWTLILILALTSS
SLLFLAILSYILCKSRKGAQKRQANLPDAVDIPYAKEQNALSMISNQAANVFDTHTFHST
TVIGTPEKLHNSVQATAEVFNETPQTFKSKYRSVAGEIDGYSTLPGYGKDNARPITVWKG
NSMMTIAVRDPQISGKDSGKGDSDVNDSDSDISEGLKKDYTSYKGLWACTSECRILGHSD
RCWSPSVSRTSGTINSRHLSTFSRTRPSSQATLQRSSYDTQTNRSVALHSLTEDQQSQYD
YIHVCSPQSQRRQDSENIDVQVFTHSTKPIATDSPARFTEA
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcgggactcgcagagactctctccgcgcacaggtgatgaaaatgagccgcgga
cttttattcgcgcggatacttggagttacgctcgtctgcatttcacaggtcgttcctgag
gaacgaacagtgaggtataagatatacgaggaggttcgaccgccgacggtcatcggaact
ctagccagcaacgtaacctggaccccggacaaaacgcgcaggactttccccggcatcagg
tttaagctcatgagcccctccaccggctccttcatccgattcagggaaagcgacgggagg
ctgacggtggaggagcgcgtcgaccgcgaacgcatctgcaagcgcaacccgcggtgcgta
atcactttcgacgtcgccttcgtctccgccgagcagttcgagctctttcacgtcgaggtg
gaagtgctggacgtcaacgacaactcgccggagtttccgcgcgccgagtgcaccgtggag
atctcggagaacgcggcgctcgggacgcgtatcgcgctggacgccgccgaggacgcggac
gtgggatctaactctatccaaacgtaccatctgagcgagaacactcactttagcatcgat
gtcattacgcgagtggatggggttaaatatgcggagctggtgctcgtcaaagagcttgac
cgtgaagcccgcgcttttttcgcgctcaaacttgtggcggcagacggcgggcatccggcg
aaaagcggtgccactaatgtcacggtcaaagtgaaggatgctaatgacaacagcccaatg
tttgaccacagccattactctgtggatgtgccagaggacactcctgttgattcattattg
ctggacctaaacgccgtcgatccagacgaaggtctcaatggacaggtcgcttatgaattt
ggcaaacaagtcacaacaaagatcaggcaactgtttaaactggattacaaaacaggacat
ttgactttgcaaagccctgtggattacgaagacgagaccacgtatgaaatcgacgtgcaa
gccaccgacttagggcacaatccggtgccctcaatgtgcaaaatcatcatcaacatcaga
gatgtgaacgacaacccgcctgaaatcatcatcacatccatcacgtcagtaacagatggc
gttgcgcatgttagcgaagctacaggtccagacatcctggtggctttaatcagcatcaaa
gacaaggacactggagccaacggccaagtgagctgcactctcaacggcggacatggaaac
ttccggcttaaaagagcatatgaaggaagctacacgatagtcacgatggcaccgttggat
agagagaagattgcggagtataatttaaccgtggtggctgaggacttcggtgtaccgccg
ttacgcaccgtcactaattacttgatacggcttacggacgtcaacgataatgcgccgaca
ttcagcgctaagatatacgaaggcttcattgaggaaaatcaacttccaggtacctacatc
accacaattctagccagcgatcaggattcggggcttaacggggaaataacctatgagctt
tttgattcggacaccaacagcgtctccagatttgctattatgaatcaagctgggaatgtt
tacgccttgcaaagttttaattacgaagttacgaagcggatagatcttcgcgtacaggct
agcgaccgaggatggccgcaacttcacaacaacgctgtattgattatcaacgtagttgat
caaaacgacaacgcaccttcgataacacaaccgacgcttgttaacggctctgccgaaatc
cagcttccccgagacgcgccgcccggttatatcgtgacccgaatcgcggcgaaagattca
gacgccggtctgaacgcggagctcacttacaaactctacgacggaggcgatttgggtttc
gccatcgatccgaacacgggagaaatatatatcaatcggaaaatcgcatacgacgagtac
gacttgtggaaagtcctagtgacggttaacgacaacggccacccgtcgttaacttcgacg
gctacaattcattttagcctaaccgagtctgcgccttcaaatggcaatttttacgacgaa
agagaggatggtgaaccaaaacaatggacgcttattttaatcttggctttgacgagttcc
tcgctactatttttggctattttatcatacatactatgcaaaagtcgcaaaggcgctcag
aagagacaagctaacctccctgacgccgtggatattccttacgctaaagagcagaacgcc
ttgtcgatgatctccaaccaggccgccaatgtgttcgacacgcacacgtttcactctacg
actgtcatcggcacgcctgagaagctacacaacagcgtgcaggcgacggctgaagttttt
aacgaaacccctcagaccttcaagagcaaatataggagtgtggcgggggaaatagatgga
tattccactttgcctggttatggtaaagacaatgctcgacccatcacggtatggaaagga
aactccatgatgaccattgcagtcagagatccgcaaatcagcggtaaagacagcggaaaa
ggagacagtgatgttaatgacagtgattccgacatcagtgaaggcctcaagaaagactac
acttcatataaaggtctgtgggcttgtaccagcgagtgcaggatcctcggtcactcggac
agatgctggagcccgtctgtgagcagaaccagcgggaccattaatagcagacatctctcg
accttctcaaggacaaggccgtcttcacaggccacgcttcagaggagcagttacgacaca
cagacgaacagaagcgtggccttgcacagccttacagaagatcagcagagtcagtacgat
tacattcacgtctgctctccacagtcacaacggagacaagactcggaaaatatagacgtg
caagtcttcacacactccaccaaacccatcgccacagatagtcccgccagatttacagaa
gcctga
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